Strain Fitness in Pseudomonas simiae WCS417 around PS417_10185

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
2,177,713	+				+0.9
2,177,719	+				-0.9
2,177,723	-				-0.8
2,177,723	-				+0.6
2,177,784	-				-0.3
2,177,785	-				-0.5
2,177,804	-				-0.1
2,177,804	-				+1.0
2,177,860	+				-1.0
2,177,949	+				+0.9
2,178,033	-				+0.0
2,178,052	+				+1.5
2,178,077	+				+0.4
2,178,093	+				-0.4
2,178,093	+				-0.3
2,178,093	+				-1.5
2,178,096	+				+0.4
2,178,097	-				-0.0
2,178,176	+				-0.6
2,178,177	-				-0.3
2,178,239	+				+0.4
2,178,239	+				-0.3
2,178,240	-				-1.5
2,178,240	-				-0.3
2,178,240	-				+0.4
2,178,240	-				+0.7
2,178,241	+				+1.3
2,178,242	-				+0.3
2,178,242	-				+0.5
2,178,242	-				+0.1
2,178,242	-				+0.4
2,178,246	+				+0.1
2,178,329	-		PS417_10180	0.30	-0.2
2,178,329	-		PS417_10180	0.30	-0.0
2,178,329	-		PS417_10180	0.30	-1.1
2,178,334	+		PS417_10180	0.31	-0.3
2,178,334	+		PS417_10180	0.31	+0.2
2,178,334	+		PS417_10180	0.31	-0.5
2,178,335	-		PS417_10180	0.32	+0.7
2,178,335	-		PS417_10180	0.32	+0.7
2,178,335	-		PS417_10180	0.32	-0.1
2,178,336	+		PS417_10180	0.32	+0.3
2,178,336	+		PS417_10180	0.32	-0.7
2,178,336	+		PS417_10180	0.32	+1.1
2,178,336	+		PS417_10180	0.32	+0.2
2,178,336	+		PS417_10180	0.32	-1.0
2,178,337	-		PS417_10180	0.32	-0.2
2,178,337	-		PS417_10180	0.32	+0.4
2,178,399	-		PS417_10180	0.47	+0.3
2,178,432	+		PS417_10180	0.56	-0.6
2,178,432	+		PS417_10180	0.56	-0.3
2,178,432	+		PS417_10180	0.56	-1.7
2,178,433	-		PS417_10180	0.56	+0.5
2,178,455	+		PS417_10180	0.61	+0.6
2,178,456	-		PS417_10180	0.61	+1.1
2,178,456	-		PS417_10180	0.61	-0.1
2,178,586	+				-1.1
2,178,586	+				+0.5
2,178,587	-				+0.5
2,178,738	+		PS417_10185	0.13	-1.4
2,178,739	-		PS417_10185	0.14	-0.4
2,178,931	+		PS417_10185	0.68	-0.4
2,178,976	+		PS417_10185	0.81	-0.8
2,178,977	-		PS417_10185	0.81	-0.2
2,178,980	-		PS417_10185	0.82	-1.2
2,179,038	-				-0.5
2,179,039	+				+1.0
2,179,040	-				+0.1
2,179,125	-				-0.5
2,179,593	-		PS417_10190	0.80	-0.6
2,179,751	-				-0.7
2,179,753	-				-0.0
2,179,758	+				+0.0
2,179,759	-				-2.3
2,179,767	-				-2.3
2,179,780	-				+1.3
2,179,801	-				+0.6
2,179,841	-				-0.3
2,179,841	-				+0.3
2,179,841	-				-0.4
2,179,845	-				+1.5
2,179,845	-				+0.1
2,179,845	-				-0.9
2,179,848	-				+0.3
2,179,848	-				-0.1
2,179,848	-				-0.2
2,179,857	-				+1.3
2,179,857	-				-0.2
2,179,857	-				-0.1
2,179,860	-				-0.2
2,179,860	-				-0.6
2,179,865	-				+0.3
2,179,890	-				+0.1
2,179,890	-				-1.9
2,179,952	-				+1.5