Strain Fitness in Pseudomonas simiae WCS417 around PS417_08605

Experiment: Nalidixic 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.025 mg/ml
1,880,061	-				+0.1
1,880,065	+				-0.2
1,880,147	+				+1.4
1,880,150	-				-0.1
1,880,210	-				-0.7
1,880,426	+		PS417_08600	0.41	+0.0
1,880,443	+		PS417_08600	0.44	-0.3
1,880,577	+		PS417_08600	0.65	-0.3
1,880,577	+		PS417_08600	0.65	-0.5
1,880,577	+		PS417_08600	0.65	+0.9
1,880,578	-		PS417_08600	0.65	-0.9
1,880,578	-		PS417_08600	0.65	+0.2
1,880,600	-		PS417_08600	0.69	-0.2
1,880,715	+		PS417_08600	0.87	+0.9
1,880,715	+		PS417_08600	0.87	-0.7
1,880,833	-				-0.3
1,881,043	+				-0.3
1,881,089	-		PS417_08605	0.14	-1.0
1,881,093	-		PS417_08605	0.15	-2.8
1,881,137	+		PS417_08605	0.26	-0.4
1,881,137	+		PS417_08605	0.26	-0.5
1,881,138	-		PS417_08605	0.27	+0.4
1,881,184	+		PS417_08605	0.38	-0.4
1,881,184	+		PS417_08605	0.38	-0.8
1,881,185	-		PS417_08605	0.39	-0.6
1,881,187	-		PS417_08605	0.39	+0.1
1,881,206	-		PS417_08605	0.44	-0.4
1,881,423	+				+0.4
1,881,423	+				-1.4
1,881,423	+				+0.9
1,881,424	-				+0.1
1,881,466	+				+0.4
1,881,491	+				+0.2
1,881,491	+				+0.8
1,881,491	+				+1.2
1,881,492	-				+0.4
1,881,492	-				+0.1
1,881,492	-				-2.7
1,881,492	-				-0.6
1,881,492	-				-0.9
1,881,532	+				+0.4
1,881,532	+				-0.7
1,881,533	-				-1.8
1,881,536	+				-0.4
1,881,536	+				-0.1
1,881,537	-				-0.8
1,881,584	-				+0.3
1,881,644	-				-0.1
1,881,910	+		PS417_08610	0.25	-0.7
1,881,910	+		PS417_08610	0.25	-0.5
1,881,910	+		PS417_08610	0.25	-0.8
1,881,910	+		PS417_08610	0.25	+3.1
1,881,910	+				+1.5
1,881,911	-		PS417_08610	0.25	-0.7
1,881,911	-		PS417_08610	0.25	-0.4
1,881,911	-		PS417_08610	0.25	-0.4
1,881,911	-		PS417_08610	0.25	-1.9
1,881,911	-		PS417_08610	0.25	-0.2
1,881,911	-		PS417_08610	0.25	-0.0
1,881,917	+		PS417_08610	0.26	-1.1
1,881,917	+		PS417_08610	0.26	-0.0
1,881,918	-		PS417_08610	0.26	-0.7
1,882,171	-		PS417_08610	0.45	+0.2
1,882,177	+		PS417_08610	0.45	-0.7
1,882,178	-		PS417_08610	0.45	-0.4
1,882,200	+		PS417_08610	0.47	-0.1
1,882,200	+		PS417_08610	0.47	-0.9
1,882,200	+		PS417_08610	0.47	-0.1
1,882,380	+		PS417_08610	0.61	+0.3
1,882,380	+		PS417_08610	0.61	+0.4
1,882,380	+		PS417_08610	0.61	-0.2
1,882,381	-		PS417_08610	0.61	-0.6
1,882,381	-		PS417_08610	0.61	+0.9
1,882,381	-		PS417_08610	0.61	-0.2
1,882,414	-		PS417_08610	0.63	+0.3