Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1784

Experiment: L-Proline (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (N)
2,098,488	+		Echvi_1782	0.61	-2.1
2,098,488	+		Echvi_1782	0.61	-0.1
2,098,488	+		Echvi_1782	0.61	+0.6
2,098,526	+		Echvi_1782	0.66	+0.1
2,098,527	-		Echvi_1782	0.66	-0.0
2,098,538	+		Echvi_1782	0.68	+0.6
2,098,538	+		Echvi_1782	0.68	-1.2
2,098,627	+		Echvi_1782	0.80	-1.9
2,098,628	-		Echvi_1782	0.80	+1.0
2,098,628	-		Echvi_1782	0.80	-2.1
2,098,632	+		Echvi_1782	0.80	-1.3
2,098,632	+		Echvi_1782	0.80	+0.4
2,098,633	-		Echvi_1782	0.81	+0.3
2,098,633	-		Echvi_1782	0.81	+0.7
2,098,633	-		Echvi_1782	0.81	+0.6
2,098,633	-		Echvi_1782	0.81	-0.6
2,098,635	-		Echvi_1782	0.81	+0.3
2,098,641	+		Echvi_1782	0.82	-0.2
2,098,643	+		Echvi_1782	0.82	-1.2
2,098,644	-		Echvi_1782	0.82	-0.3
2,098,644	-		Echvi_1782	0.82	-0.9
2,098,652	-		Echvi_1782	0.83	-0.1
2,098,658	+		Echvi_1782	0.84	+1.7
2,098,658	+		Echvi_1782	0.84	-1.4
2,098,659	-		Echvi_1782	0.84	+1.3
2,098,661	+		Echvi_1782	0.84	+0.7
2,098,735	+				+0.5
2,098,735	+				-0.8
2,098,736	-				+0.3
2,098,739	+				+0.2
2,098,795	+				-1.4
2,098,798	+				+0.5
2,098,798	+				-0.3
2,098,798	+				+0.9
2,098,798	+				-0.3
2,098,798	+				-0.2
2,098,799	-				+0.6
2,098,814	+				+0.5
2,098,871	+				-0.9
2,098,872	-				-1.9
2,098,872	-				-1.8
2,098,896	-				+0.7
2,098,896	-				+2.5
2,098,921	+				+0.1
2,099,005	-		Echvi_1783	0.17	-0.0
2,099,005	-		Echvi_1783	0.17	-0.7
2,099,013	+		Echvi_1783	0.19	-1.3
2,099,013	+		Echvi_1783	0.19	-0.3
2,099,014	-		Echvi_1783	0.19	+0.7
2,099,014	-		Echvi_1783	0.19	+0.1
2,099,075	+		Echvi_1783	0.33	-0.9
2,099,075	+		Echvi_1783	0.33	-0.8
2,099,076	-		Echvi_1783	0.33	-0.7
2,099,076	-		Echvi_1783	0.33	-0.4
2,099,185	+		Echvi_1783	0.58	+0.8
2,099,214	+		Echvi_1783	0.64	-0.1
2,099,215	-		Echvi_1783	0.64	-0.6
2,099,261	+		Echvi_1783	0.75	+1.1
2,099,289	+		Echvi_1783	0.81	-0.2
2,099,290	-		Echvi_1783	0.81	-2.0
2,099,306	+		Echvi_1783	0.85	-0.7
2,099,316	+		Echvi_1783	0.87	+1.1
2,099,392	-				-0.3
2,099,398	-				-0.3
2,099,408	+				-0.7
2,099,444	+				-0.3
2,099,511	+				-0.3
2,099,524	-				-0.0
2,099,524	-				+1.2
2,099,524	-				+0.0
2,099,582	+				-0.3
2,099,582	+				+0.5
2,099,583	-				+0.8
2,099,671	+		Echvi_1784	0.13	-0.4
2,099,671	+		Echvi_1784	0.13	-0.6
2,099,671	+		Echvi_1784	0.13	-1.7
2,099,673	+		Echvi_1784	0.13	+0.4
2,099,673	+		Echvi_1784	0.13	+0.9
2,099,726	+		Echvi_1784	0.16	+0.5
2,099,816	+		Echvi_1784	0.21	-1.1
2,099,817	-		Echvi_1784	0.21	+1.1
2,099,838	+		Echvi_1784	0.23	-0.3
2,099,888	+		Echvi_1784	0.26	-0.9
2,099,914	+		Echvi_1784	0.27	+1.0
2,099,914	+		Echvi_1784	0.27	-0.7
2,099,914	+		Echvi_1784	0.27	-0.0
2,099,915	-		Echvi_1784	0.27	-0.0
2,099,915	-		Echvi_1784	0.27	-0.7
2,099,915	-		Echvi_1784	0.27	-0.7
2,099,915	-		Echvi_1784	0.27	-0.7
2,099,916	+		Echvi_1784	0.27	+0.3
2,099,990	+		Echvi_1784	0.32	+0.7
2,100,033	+		Echvi_1784	0.34	+0.4
2,100,034	-		Echvi_1784	0.34	-0.3
2,100,034	-		Echvi_1784	0.34	-1.1
2,100,037	+		Echvi_1784	0.35	-0.5
2,100,038	-		Echvi_1784	0.35	-1.1
2,100,106	+		Echvi_1784	0.39	-0.8
2,100,107	-		Echvi_1784	0.39	-2.4
2,100,161	-		Echvi_1784	0.42	-0.2
2,100,176	-		Echvi_1784	0.43	+0.1
2,100,179	+		Echvi_1784	0.43	-0.2
2,100,180	-		Echvi_1784	0.43	+0.4
2,100,180	-		Echvi_1784	0.43	-0.4
2,100,220	+		Echvi_1784	0.46	-1.6
2,100,222	+		Echvi_1784	0.46	-1.2
2,100,223	-		Echvi_1784	0.46	-1.2
2,100,254	-		Echvi_1784	0.48	-1.3
2,100,283	-		Echvi_1784	0.49	-1.4
2,100,330	+		Echvi_1784	0.52	+1.0
2,100,330	+		Echvi_1784	0.52	+0.2
2,100,347	+		Echvi_1784	0.53	-0.1
2,100,348	-		Echvi_1784	0.53	-0.5
2,100,348	-		Echvi_1784	0.53	+0.2
2,100,348	-		Echvi_1784	0.53	-0.1
2,100,411	-		Echvi_1784	0.57	-0.8
2,100,441	+		Echvi_1784	0.59	+0.1
2,100,442	-		Echvi_1784	0.59	-0.9
2,100,451	-		Echvi_1784	0.59	+0.3
2,100,455	+		Echvi_1784	0.60	-1.0
2,100,456	-		Echvi_1784	0.60	+1.0
2,100,456	-		Echvi_1784	0.60	-0.1
2,100,465	+		Echvi_1784	0.60	-2.0
2,100,468	-		Echvi_1784	0.60	+0.1
2,100,468	-		Echvi_1784	0.60	-0.4
2,100,523	+		Echvi_1784	0.64	-0.7
2,100,585	-		Echvi_1784	0.68	-0.8
2,100,612	+		Echvi_1784	0.69	-1.8
2,100,612	+		Echvi_1784	0.69	-0.3
2,100,612	+		Echvi_1784	0.69	-0.6
2,100,684	+		Echvi_1784	0.73	-0.1
2,100,686	+		Echvi_1784	0.74	-0.0
2,100,687	-		Echvi_1784	0.74	-0.2
2,100,687	-		Echvi_1784	0.74	-0.3
2,100,715	+		Echvi_1784	0.75	-1.8
2,100,719	+		Echvi_1784	0.76	+0.3
2,100,780	-		Echvi_1784	0.79	-1.8
2,100,810	+		Echvi_1784	0.81	+1.7
2,100,811	-		Echvi_1784	0.81	-0.3
2,100,871	-		Echvi_1784	0.85	-0.2
2,100,871	-		Echvi_1784	0.85	+0.8
2,100,905	-		Echvi_1784	0.87	+0.7
2,100,990	+				+1.7
2,100,990	+				+0.5
2,100,990	+				+0.4
2,101,042	-				+0.7
2,101,109	-				+1.7
2,101,109	-				-0.4
2,101,110	+				+0.7
2,101,110	+				-0.3
2,101,110	+				-0.8
2,101,110	+				-0.2
2,101,110	+				-1.4
2,101,111	-				+0.1
2,101,111	-				+0.9
2,101,111	-				+0.7
2,101,111	-				-0.8
2,101,111	-				+0.6
2,101,111	-				-0.2
2,101,113	-				-0.4
2,101,113	-				-0.4
2,101,113	-				+0.7
2,101,113	-				+0.7
2,101,113	-				+1.2
2,101,113	-				+1.3
2,101,119	+				-0.9
2,101,119	+				+0.8
2,101,119	+				-1.1
2,101,128	+				+0.1
2,101,141	+				-0.6
2,101,142	-				+0.1
2,101,156	+				-0.0
2,101,925	+				-0.2
2,101,925	+				+1.7
2,101,925	+				+0.8
2,101,928	+				+1.2
2,101,928	+				+1.3
2,101,946	+				+1.6
2,101,946	+				+1.6
2,101,946	+				+1.2
2,101,946	+				+1.3
2,101,946	+				+1.4
2,101,946	+				+1.7
2,101,992	+				-0.1
2,102,022	+				+0.8
2,102,048	+		Echvi_1787	0.10	+1.6
2,102,049	-		Echvi_1787	0.10	+1.5
2,102,056	+		Echvi_1787	0.11	+2.4
2,102,059	+		Echvi_1787	0.11	+1.7
2,102,059	+		Echvi_1787	0.11	+1.9
2,102,059	+		Echvi_1787	0.11	+2.0
2,102,090	+		Echvi_1787	0.13	+1.9
2,102,091	-		Echvi_1787	0.13	+1.7