Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20860 and CA264_20865 are separated by 221 nucleotides CA264_20865 and CA264_20870 are separated by 130 nucleotides
CA264_20860: CA264_20860 - site-specific DNA-methyltransferase, at 31,910 to 33,493
_20860
CA264_20865: CA264_20865 - restriction endonuclease, at 33,715 to 36,360
_20865
CA264_20870: CA264_20870 - addiction module protein, at 36,491 to 37,606
_20870
Position (kb)
33
34
35
36
37 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 32.753 kb on - strand, within CA264_20860 at 32.753 kb on - strand, within CA264_20860 at 32.754 kb on + strand, within CA264_20860 at 32.881 kb on + strand, within CA264_20860 at 32.887 kb on + strand, within CA264_20860 at 32.887 kb on + strand, within CA264_20860 at 32.893 kb on + strand, within CA264_20860 at 32.893 kb on + strand, within CA264_20860 at 32.894 kb on - strand, within CA264_20860 at 32.916 kb on + strand, within CA264_20860 at 33.051 kb on - strand, within CA264_20860 at 33.051 kb on - strand, within CA264_20860 at 33.113 kb on - strand, within CA264_20860 at 33.121 kb on - strand, within CA264_20860 at 33.143 kb on - strand, within CA264_20860 at 33.146 kb on + strand, within CA264_20860 at 33.147 kb on - strand, within CA264_20860 at 33.147 kb on - strand, within CA264_20860 at 33.152 kb on - strand, within CA264_20860 at 33.152 kb on - strand, within CA264_20860 at 33.152 kb on - strand, within CA264_20860 at 33.225 kb on - strand, within CA264_20860 at 33.234 kb on - strand, within CA264_20860 at 33.281 kb on - strand, within CA264_20860 at 33.357 kb on - strand at 33.395 kb on + strand at 33.395 kb on + strand at 33.404 kb on + strand at 33.449 kb on - strand at 33.479 kb on - strand at 33.530 kb on - strand at 33.540 kb on - strand at 33.540 kb on - strand at 33.542 kb on - strand at 33.542 kb on - strand at 33.545 kb on - strand at 33.623 kb on - strand at 33.623 kb on - strand at 33.713 kb on - strand at 33.722 kb on + strand at 33.730 kb on + strand at 33.731 kb on - strand at 33.731 kb on - strand at 33.811 kb on - strand at 33.838 kb on + strand at 33.838 kb on + strand at 33.861 kb on + strand at 33.879 kb on + strand at 33.939 kb on + strand at 34.004 kb on + strand, within CA264_20865 at 34.053 kb on + strand, within CA264_20865 at 34.117 kb on + strand, within CA264_20865 at 34.118 kb on - strand, within CA264_20865 at 34.118 kb on - strand, within CA264_20865 at 34.279 kb on + strand, within CA264_20865 at 34.280 kb on - strand, within CA264_20865 at 34.280 kb on - strand, within CA264_20865 at 34.281 kb on + strand, within CA264_20865 at 34.282 kb on - strand, within CA264_20865 at 34.308 kb on + strand, within CA264_20865 at 34.358 kb on + strand, within CA264_20865 at 34.358 kb on + strand, within CA264_20865 at 34.358 kb on + strand, within CA264_20865 at 34.364 kb on + strand, within CA264_20865 at 34.365 kb on - strand, within CA264_20865 at 34.470 kb on + strand, within CA264_20865 at 34.492 kb on - strand, within CA264_20865 at 34.538 kb on - strand, within CA264_20865 at 34.637 kb on - strand, within CA264_20865 at 34.640 kb on + strand, within CA264_20865 at 34.641 kb on - strand, within CA264_20865 at 34.701 kb on + strand, within CA264_20865 at 34.727 kb on + strand, within CA264_20865 at 34.728 kb on - strand, within CA264_20865 at 34.755 kb on - strand, within CA264_20865 at 34.830 kb on + strand, within CA264_20865 at 34.831 kb on - strand, within CA264_20865 at 34.833 kb on - strand, within CA264_20865 at 34.870 kb on + strand, within CA264_20865 at 34.874 kb on + strand, within CA264_20865 at 34.875 kb on - strand, within CA264_20865 at 34.875 kb on - strand, within CA264_20865 at 34.877 kb on + strand, within CA264_20865 at 34.878 kb on - strand, within CA264_20865 at 34.949 kb on - strand, within CA264_20865 at 34.988 kb on - strand, within CA264_20865 at 35.014 kb on - strand, within CA264_20865 at 35.032 kb on - strand, within CA264_20865 at 35.205 kb on + strand, within CA264_20865 at 35.206 kb on - strand, within CA264_20865 at 35.206 kb on - strand, within CA264_20865 at 35.206 kb on - strand, within CA264_20865 at 35.210 kb on - strand, within CA264_20865 at 35.221 kb on - strand, within CA264_20865 at 35.229 kb on - strand, within CA264_20865 at 35.367 kb on - strand, within CA264_20865 at 35.442 kb on - strand, within CA264_20865 at 35.488 kb on - strand, within CA264_20865 at 35.505 kb on - strand, within CA264_20865 at 35.535 kb on + strand, within CA264_20865 at 35.536 kb on - strand, within CA264_20865 at 35.536 kb on - strand, within CA264_20865 at 35.570 kb on - strand, within CA264_20865 at 35.570 kb on - strand, within CA264_20865 at 35.570 kb on - strand, within CA264_20865 at 35.570 kb on - strand, within CA264_20865 at 35.643 kb on - strand, within CA264_20865 at 35.737 kb on + strand, within CA264_20865 at 35.738 kb on - strand, within CA264_20865 at 35.738 kb on - strand, within CA264_20865 at 35.738 kb on - strand, within CA264_20865 at 35.738 kb on - strand, within CA264_20865 at 35.760 kb on - strand, within CA264_20865 at 35.793 kb on - strand, within CA264_20865 at 35.831 kb on - strand, within CA264_20865 at 35.836 kb on + strand, within CA264_20865 at 35.837 kb on - strand, within CA264_20865 at 35.837 kb on - strand, within CA264_20865 at 35.845 kb on - strand, within CA264_20865 at 35.845 kb on - strand, within CA264_20865 at 35.850 kb on - strand, within CA264_20865 at 35.899 kb on - strand, within CA264_20865 at 36.025 kb on - strand, within CA264_20865 at 36.140 kb on - strand at 36.179 kb on + strand at 36.180 kb on - strand at 36.281 kb on - strand at 36.281 kb on - strand at 36.301 kb on - strand at 36.320 kb on - strand at 36.359 kb on - strand at 36.359 kb on - strand at 36.408 kb on - strand at 36.408 kb on - strand at 36.408 kb on - strand at 36.421 kb on - strand at 36.421 kb on - strand at 36.421 kb on - strand at 36.421 kb on - strand at 36.421 kb on - strand at 36.425 kb on - strand at 36.425 kb on - strand at 36.429 kb on - strand at 36.429 kb on - strand at 36.429 kb on - strand at 36.429 kb on - strand at 36.431 kb on - strand at 36.476 kb on - strand at 36.604 kb on + strand, within CA264_20870 at 36.621 kb on + strand, within CA264_20870 at 36.621 kb on + strand, within CA264_20870 at 36.622 kb on - strand, within CA264_20870 at 36.732 kb on + strand, within CA264_20870 at 36.746 kb on - strand, within CA264_20870 at 36.761 kb on + strand, within CA264_20870 at 36.805 kb on + strand, within CA264_20870 at 36.819 kb on + strand, within CA264_20870 at 36.819 kb on + strand, within CA264_20870 at 36.827 kb on - strand, within CA264_20870 at 36.833 kb on - strand, within CA264_20870 at 36.875 kb on - strand, within CA264_20870 at 36.875 kb on - strand, within CA264_20870 at 36.981 kb on - strand, within CA264_20870 at 36.981 kb on - strand, within CA264_20870 at 36.982 kb on + strand, within CA264_20870 at 36.982 kb on + strand, within CA264_20870 at 36.983 kb on - strand, within CA264_20870 at 36.983 kb on - strand, within CA264_20870 at 37.067 kb on + strand, within CA264_20870 at 37.068 kb on - strand, within CA264_20870 at 37.068 kb on - strand, within CA264_20870 at 37.093 kb on + strand, within CA264_20870 at 37.093 kb on + strand, within CA264_20870 at 37.094 kb on - strand, within CA264_20870 at 37.094 kb on - strand, within CA264_20870 at 37.110 kb on - strand, within CA264_20870 at 37.137 kb on + strand, within CA264_20870 at 37.138 kb on - strand, within CA264_20870 at 37.149 kb on - strand, within CA264_20870 at 37.160 kb on + strand, within CA264_20870 at 37.161 kb on - strand, within CA264_20870 at 37.355 kb on + strand, within CA264_20870
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 32,753 - CA264_20860 0.53 -2.9 32,753 - CA264_20860 0.53 -2.1 32,754 + CA264_20860 0.53 -3.2 32,881 + CA264_20860 0.61 -0.9 32,887 + CA264_20860 0.62 -4.1 32,887 + CA264_20860 0.62 -1.8 32,893 + CA264_20860 0.62 -4.4 32,893 + CA264_20860 0.62 -2.8 32,894 - CA264_20860 0.62 -3.2 32,916 + CA264_20860 0.64 -3.1 33,051 - CA264_20860 0.72 -1.3 33,051 - CA264_20860 0.72 -3.8 33,113 - CA264_20860 0.76 -3.4 33,121 - CA264_20860 0.76 -4.8 33,143 - CA264_20860 0.78 -2.8 33,146 + CA264_20860 0.78 -2.7 33,147 - CA264_20860 0.78 -2.8 33,147 - CA264_20860 0.78 -4.6 33,152 - CA264_20860 0.78 -2.0 33,152 - CA264_20860 0.78 -2.3 33,152 - CA264_20860 0.78 -0.5 33,225 - CA264_20860 0.83 -1.3 33,234 - CA264_20860 0.84 -2.3 33,281 - CA264_20860 0.87 -3.8 33,357 - -2.7 33,395 + -2.2 33,395 + -2.1 33,404 + -2.9 33,449 - -2.1 33,479 - -2.6 33,530 - -3.3 33,540 - -5.5 33,540 - -5.3 33,542 - -3.2 33,542 - -3.8 33,545 - -2.5 33,623 - -3.6 33,623 - -3.5 33,713 - -1.5 33,722 + -3.5 33,730 + -2.6 33,731 - -0.4 33,731 - -0.5 33,811 - +0.9 33,838 + -4.4 33,838 + -4.0 33,861 + -3.5 33,879 + -2.9 33,939 + -1.8 34,004 + CA264_20865 0.11 -2.5 34,053 + CA264_20865 0.13 -1.4 34,117 + CA264_20865 0.15 -3.2 34,118 - CA264_20865 0.15 -0.6 34,118 - CA264_20865 0.15 +1.1 34,279 + CA264_20865 0.21 -1.8 34,280 - CA264_20865 0.21 -0.3 34,280 - CA264_20865 0.21 +0.4 34,281 + CA264_20865 0.21 -2.4 34,282 - CA264_20865 0.21 -3.6 34,308 + CA264_20865 0.22 -4.1 34,358 + CA264_20865 0.24 -3.3 34,358 + CA264_20865 0.24 -1.4 34,358 + CA264_20865 0.24 -3.2 34,364 + CA264_20865 0.25 -3.7 34,365 - CA264_20865 0.25 -3.7 34,470 + CA264_20865 0.29 -1.2 34,492 - CA264_20865 0.29 -2.9 34,538 - CA264_20865 0.31 -1.2 34,637 - CA264_20865 0.35 -0.1 34,640 + CA264_20865 0.35 -2.8 34,641 - CA264_20865 0.35 -1.8 34,701 + CA264_20865 0.37 -0.6 34,727 + CA264_20865 0.38 -0.9 34,728 - CA264_20865 0.38 -4.8 34,755 - CA264_20865 0.39 -4.3 34,830 + CA264_20865 0.42 -0.9 34,831 - CA264_20865 0.42 -4.3 34,833 - CA264_20865 0.42 -3.2 34,870 + CA264_20865 0.44 -2.8 34,874 + CA264_20865 0.44 -1.8 34,875 - CA264_20865 0.44 -3.4 34,875 - CA264_20865 0.44 -3.2 34,877 + CA264_20865 0.44 -0.2 34,878 - CA264_20865 0.44 -2.3 34,949 - CA264_20865 0.47 -2.7 34,988 - CA264_20865 0.48 -4.1 35,014 - CA264_20865 0.49 -3.2 35,032 - CA264_20865 0.50 -0.3 35,205 + CA264_20865 0.56 -3.9 35,206 - CA264_20865 0.56 +0.1 35,206 - CA264_20865 0.56 -1.7 35,206 - CA264_20865 0.56 -3.3 35,210 - CA264_20865 0.57 -1.2 35,221 - CA264_20865 0.57 -2.4 35,229 - CA264_20865 0.57 -5.8 35,367 - CA264_20865 0.62 -3.0 35,442 - CA264_20865 0.65 -4.4 35,488 - CA264_20865 0.67 -3.0 35,505 - CA264_20865 0.68 -2.4 35,535 + CA264_20865 0.69 -1.6 35,536 - CA264_20865 0.69 -3.5 35,536 - CA264_20865 0.69 -0.3 35,570 - CA264_20865 0.70 -2.7 35,570 - CA264_20865 0.70 -4.5 35,570 - CA264_20865 0.70 -2.8 35,570 - CA264_20865 0.70 -1.3 35,643 - CA264_20865 0.73 -2.8 35,737 + CA264_20865 0.76 -3.5 35,738 - CA264_20865 0.76 -0.9 35,738 - CA264_20865 0.76 -1.7 35,738 - CA264_20865 0.76 -3.0 35,738 - CA264_20865 0.76 -2.6 35,760 - CA264_20865 0.77 -6.2 35,793 - CA264_20865 0.79 -3.8 35,831 - CA264_20865 0.80 -4.4 35,836 + CA264_20865 0.80 -2.3 35,837 - CA264_20865 0.80 -2.7 35,837 - CA264_20865 0.80 -2.8 35,845 - CA264_20865 0.80 -2.5 35,845 - CA264_20865 0.80 -4.4 35,850 - CA264_20865 0.81 -3.6 35,899 - CA264_20865 0.83 -2.9 36,025 - CA264_20865 0.87 -3.5 36,140 - -3.0 36,179 + -1.5 36,180 - -4.1 36,281 - -2.9 36,281 - -4.2 36,301 - -2.8 36,320 - -3.2 36,359 - -3.6 36,359 - -3.7 36,408 - +0.3 36,408 - -2.9 36,408 - -1.9 36,421 - -1.5 36,421 - -0.9 36,421 - -1.6 36,421 - -3.9 36,421 - -3.0 36,425 - -2.2 36,425 - -2.8 36,429 - -3.0 36,429 - -2.1 36,429 - -2.4 36,429 - -3.4 36,431 - -2.7 36,476 - -2.2 36,604 + CA264_20870 0.10 +1.1 36,621 + CA264_20870 0.12 +0.7 36,621 + CA264_20870 0.12 +0.2 36,622 - CA264_20870 0.12 -0.5 36,732 + CA264_20870 0.22 -0.1 36,746 - CA264_20870 0.23 -0.5 36,761 + CA264_20870 0.24 +0.4 36,805 + CA264_20870 0.28 -0.6 36,819 + CA264_20870 0.29 +0.7 36,819 + CA264_20870 0.29 +0.1 36,827 - CA264_20870 0.30 +0.9 36,833 - CA264_20870 0.31 -0.6 36,875 - CA264_20870 0.34 +0.0 36,875 - CA264_20870 0.34 +0.5 36,981 - CA264_20870 0.44 -0.5 36,981 - CA264_20870 0.44 +0.1 36,982 + CA264_20870 0.44 -0.2 36,982 + CA264_20870 0.44 +0.3 36,983 - CA264_20870 0.44 -0.0 36,983 - CA264_20870 0.44 +0.1 37,067 + CA264_20870 0.52 -0.2 37,068 - CA264_20870 0.52 -0.3 37,068 - CA264_20870 0.52 +0.1 37,093 + CA264_20870 0.54 -0.3 37,093 + CA264_20870 0.54 -0.8 37,094 - CA264_20870 0.54 -0.0 37,094 - CA264_20870 0.54 -0.1 37,110 - CA264_20870 0.55 -0.1 37,137 + CA264_20870 0.58 -0.2 37,138 - CA264_20870 0.58 +0.1 37,149 - CA264_20870 0.59 -0.6 37,160 + CA264_20870 0.60 +0.0 37,161 - CA264_20870 0.60 -0.3 37,355 + CA264_20870 0.77 -2.8
Or see this region's nucleotide sequence