Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_19975

Experiment: m.b. Dimethyl Sulfoxide 10 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_19965 and CA264_19970 are separated by 203 nucleotidesCA264_19970 and CA264_19975 are separated by 14 nucleotidesCA264_19975 and CA264_19980 are separated by 221 nucleotides CA264_19965: CA264_19965 - dipeptidyl aminopeptidase, at 4,601,686 to 4,602,768 _19965 CA264_19970: CA264_19970 - hypothetical protein, at 4,602,972 to 4,603,226 _19970 CA264_19975: CA264_19975 - hypothetical protein, at 4,603,241 to 4,607,191 _19975 CA264_19980: CA264_19980 - hypothetical protein, at 4,607,413 to 4,608,261 _19980 Position (kb) 4603 4604 4605 4606 4607 4608Strain fitness (log2 ratio) -2 -1 0 1 2at 4602.279 kb on - strand, within CA264_19965at 4602.322 kb on + strand, within CA264_19965at 4602.419 kb on + strand, within CA264_19965at 4602.419 kb on + strand, within CA264_19965at 4602.545 kb on - strand, within CA264_19965at 4602.545 kb on - strand, within CA264_19965at 4602.568 kb on - strand, within CA264_19965at 4602.568 kb on - strand, within CA264_19965at 4602.574 kb on + strand, within CA264_19965at 4602.574 kb on + strand, within CA264_19965at 4602.584 kb on - strand, within CA264_19965at 4602.744 kb on + strandat 4602.771 kb on - strandat 4602.771 kb on - strandat 4602.772 kb on + strandat 4602.815 kb on + strandat 4602.830 kb on - strandat 4603.012 kb on + strand, within CA264_19970at 4603.063 kb on - strand, within CA264_19970at 4603.235 kb on + strandat 4603.249 kb on + strandat 4603.262 kb on + strandat 4603.279 kb on + strandat 4603.280 kb on - strandat 4603.345 kb on - strandat 4603.382 kb on - strandat 4603.433 kb on + strandat 4603.433 kb on + strandat 4603.486 kb on + strandat 4603.489 kb on - strandat 4603.528 kb on + strandat 4603.538 kb on + strandat 4603.539 kb on - strandat 4603.712 kb on + strand, within CA264_19975at 4603.713 kb on - strand, within CA264_19975at 4603.713 kb on - strand, within CA264_19975at 4603.824 kb on + strand, within CA264_19975at 4603.824 kb on + strand, within CA264_19975at 4603.829 kb on - strand, within CA264_19975at 4603.831 kb on - strand, within CA264_19975at 4603.863 kb on + strand, within CA264_19975at 4603.895 kb on + strand, within CA264_19975at 4603.895 kb on + strand, within CA264_19975at 4603.953 kb on + strand, within CA264_19975at 4603.977 kb on + strand, within CA264_19975at 4604.056 kb on + strand, within CA264_19975at 4604.056 kb on + strand, within CA264_19975at 4604.468 kb on - strand, within CA264_19975at 4604.497 kb on + strand, within CA264_19975at 4604.549 kb on + strand, within CA264_19975at 4604.594 kb on + strand, within CA264_19975at 4604.595 kb on - strand, within CA264_19975at 4604.599 kb on + strand, within CA264_19975at 4604.720 kb on + strand, within CA264_19975at 4604.721 kb on - strand, within CA264_19975at 4604.755 kb on - strand, within CA264_19975at 4604.757 kb on + strand, within CA264_19975at 4604.758 kb on - strand, within CA264_19975at 4604.758 kb on - strand, within CA264_19975at 4604.816 kb on + strand, within CA264_19975at 4604.816 kb on + strand, within CA264_19975at 4604.846 kb on + strand, within CA264_19975at 4604.847 kb on - strand, within CA264_19975at 4604.866 kb on + strand, within CA264_19975at 4604.867 kb on - strand, within CA264_19975at 4604.869 kb on - strand, within CA264_19975at 4604.869 kb on - strand, within CA264_19975at 4604.987 kb on + strand, within CA264_19975at 4605.063 kb on - strand, within CA264_19975at 4605.104 kb on + strand, within CA264_19975at 4605.152 kb on - strand, within CA264_19975at 4605.226 kb on + strand, within CA264_19975at 4605.227 kb on - strand, within CA264_19975at 4605.249 kb on + strand, within CA264_19975at 4605.261 kb on + strand, within CA264_19975at 4605.322 kb on - strand, within CA264_19975at 4605.428 kb on - strand, within CA264_19975at 4605.430 kb on - strand, within CA264_19975at 4605.430 kb on - strand, within CA264_19975at 4605.430 kb on - strand, within CA264_19975at 4605.451 kb on + strand, within CA264_19975at 4605.512 kb on + strand, within CA264_19975at 4605.768 kb on + strand, within CA264_19975at 4605.769 kb on - strand, within CA264_19975at 4605.839 kb on + strand, within CA264_19975at 4606.085 kb on - strand, within CA264_19975at 4606.093 kb on + strand, within CA264_19975at 4606.098 kb on + strand, within CA264_19975at 4606.098 kb on + strand, within CA264_19975at 4606.099 kb on - strand, within CA264_19975at 4606.241 kb on + strand, within CA264_19975at 4606.314 kb on - strand, within CA264_19975at 4606.320 kb on - strand, within CA264_19975at 4606.390 kb on - strand, within CA264_19975at 4606.390 kb on - strand, within CA264_19975at 4606.633 kb on + strand, within CA264_19975at 4606.690 kb on + strand, within CA264_19975at 4606.801 kb on + strandat 4606.801 kb on + strandat 4606.802 kb on - strandat 4606.845 kb on - strandat 4607.039 kb on + strandat 4607.039 kb on + strandat 4607.040 kb on - strandat 4607.240 kb on - strandat 4607.242 kb on + strandat 4607.249 kb on + strandat 4607.250 kb on - strandat 4607.259 kb on + strandat 4607.259 kb on + strandat 4607.259 kb on + strandat 4607.260 kb on - strandat 4607.290 kb on + strandat 4607.294 kb on + strandat 4607.295 kb on - strandat 4607.295 kb on - strandat 4607.349 kb on + strandat 4607.349 kb on + strandat 4607.349 kb on + strandat 4607.349 kb on + strandat 4607.350 kb on - strandat 4607.371 kb on + strandat 4607.371 kb on + strandat 4607.371 kb on + strandat 4607.375 kb on + strandat 4607.376 kb on - strandat 4607.376 kb on - strandat 4607.376 kb on - strandat 4607.420 kb on - strandat 4607.426 kb on + strandat 4607.427 kb on - strandat 4607.437 kb on + strandat 4607.512 kb on - strand, within CA264_19980at 4607.552 kb on + strand, within CA264_19980at 4607.592 kb on + strand, within CA264_19980at 4607.592 kb on + strand, within CA264_19980at 4607.592 kb on + strand, within CA264_19980at 4607.593 kb on - strand, within CA264_19980at 4607.593 kb on - strand, within CA264_19980at 4607.725 kb on + strand, within CA264_19980at 4607.726 kb on - strand, within CA264_19980at 4607.731 kb on + strand, within CA264_19980at 4607.732 kb on - strand, within CA264_19980at 4607.732 kb on - strand, within CA264_19980at 4607.825 kb on - strand, within CA264_19980at 4607.918 kb on - strand, within CA264_19980at 4607.965 kb on - strand, within CA264_19980at 4607.965 kb on - strand, within CA264_19980at 4607.965 kb on - strand, within CA264_19980at 4608.003 kb on - strand, within CA264_19980at 4608.093 kb on - strand, within CA264_19980at 4608.143 kb on - strand, within CA264_19980at 4608.155 kb on + strand, within CA264_19980at 4608.155 kb on + strand, within CA264_19980

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol%
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4,602,279 - CA264_19965 0.55 -0.7
4,602,322 + CA264_19965 0.59 -0.2
4,602,419 + CA264_19965 0.68 -0.1
4,602,419 + CA264_19965 0.68 +0.1
4,602,545 - CA264_19965 0.79 -0.7
4,602,545 - CA264_19965 0.79 +0.4
4,602,568 - CA264_19965 0.81 +0.3
4,602,568 - CA264_19965 0.81 -0.1
4,602,574 + CA264_19965 0.82 +0.2
4,602,574 + CA264_19965 0.82 +0.6
4,602,584 - CA264_19965 0.83 +0.2
4,602,744 + +0.8
4,602,771 - +0.3
4,602,771 - +2.5
4,602,772 + +0.2
4,602,815 + +0.6
4,602,830 - +1.6
4,603,012 + CA264_19970 0.16 -0.0
4,603,063 - CA264_19970 0.36 +2.0
4,603,235 + -0.7
4,603,249 + -1.0
4,603,262 + -0.4
4,603,279 + -1.6
4,603,280 - -1.6
4,603,345 - -1.3
4,603,382 - +0.3
4,603,433 + +0.8
4,603,433 + -0.8
4,603,486 + -0.5
4,603,489 - -1.1
4,603,528 + -2.0
4,603,538 + -0.9
4,603,539 - +2.5
4,603,712 + CA264_19975 0.12 -0.1
4,603,713 - CA264_19975 0.12 -0.1
4,603,713 - CA264_19975 0.12 +0.2
4,603,824 + CA264_19975 0.15 +1.3
4,603,824 + CA264_19975 0.15 -0.6
4,603,829 - CA264_19975 0.15 -0.7
4,603,831 - CA264_19975 0.15 -0.3
4,603,863 + CA264_19975 0.16 -1.3
4,603,895 + CA264_19975 0.17 -0.7
4,603,895 + CA264_19975 0.17 -1.1
4,603,953 + CA264_19975 0.18 -1.0
4,603,977 + CA264_19975 0.19 -1.2
4,604,056 + CA264_19975 0.21 -0.7
4,604,056 + CA264_19975 0.21 -0.6
4,604,468 - CA264_19975 0.31 +0.9
4,604,497 + CA264_19975 0.32 +0.2
4,604,549 + CA264_19975 0.33 +0.8
4,604,594 + CA264_19975 0.34 -0.6
4,604,595 - CA264_19975 0.34 -0.5
4,604,599 + CA264_19975 0.34 -1.2
4,604,720 + CA264_19975 0.37 -1.3
4,604,721 - CA264_19975 0.37 -0.8
4,604,755 - CA264_19975 0.38 -2.4
4,604,757 + CA264_19975 0.38 -0.3
4,604,758 - CA264_19975 0.38 -2.7
4,604,758 - CA264_19975 0.38 -0.4
4,604,816 + CA264_19975 0.40 -0.6
4,604,816 + CA264_19975 0.40 +0.7
4,604,846 + CA264_19975 0.41 -1.4
4,604,847 - CA264_19975 0.41 -0.1
4,604,866 + CA264_19975 0.41 -1.3
4,604,867 - CA264_19975 0.41 +0.3
4,604,869 - CA264_19975 0.41 -1.6
4,604,869 - CA264_19975 0.41 -1.2
4,604,987 + CA264_19975 0.44 -0.9
4,605,063 - CA264_19975 0.46 -0.7
4,605,104 + CA264_19975 0.47 -1.4
4,605,152 - CA264_19975 0.48 -1.7
4,605,226 + CA264_19975 0.50 -2.5
4,605,227 - CA264_19975 0.50 -1.1
4,605,249 + CA264_19975 0.51 -0.4
4,605,261 + CA264_19975 0.51 +0.4
4,605,322 - CA264_19975 0.53 -0.8
4,605,428 - CA264_19975 0.55 +0.3
4,605,430 - CA264_19975 0.55 -0.1
4,605,430 - CA264_19975 0.55 -1.3
4,605,430 - CA264_19975 0.55 -0.8
4,605,451 + CA264_19975 0.56 -0.7
4,605,512 + CA264_19975 0.57 -0.1
4,605,768 + CA264_19975 0.64 -1.3
4,605,769 - CA264_19975 0.64 -2.4
4,605,839 + CA264_19975 0.66 +0.9
4,606,085 - CA264_19975 0.72 +0.7
4,606,093 + CA264_19975 0.72 -2.6
4,606,098 + CA264_19975 0.72 -0.7
4,606,098 + CA264_19975 0.72 -0.8
4,606,099 - CA264_19975 0.72 -1.0
4,606,241 + CA264_19975 0.76 -1.1
4,606,314 - CA264_19975 0.78 -0.2
4,606,320 - CA264_19975 0.78 -0.2
4,606,390 - CA264_19975 0.80 -0.6
4,606,390 - CA264_19975 0.80 -0.7
4,606,633 + CA264_19975 0.86 -0.5
4,606,690 + CA264_19975 0.87 +0.5
4,606,801 + -0.8
4,606,801 + +0.4
4,606,802 - -1.1
4,606,845 - +1.2
4,607,039 + -0.9
4,607,039 + -0.7
4,607,040 - -0.3
4,607,240 - -2.0
4,607,242 + -0.7
4,607,249 + -2.6
4,607,250 - -1.2
4,607,259 + -1.5
4,607,259 + +0.0
4,607,259 + -1.0
4,607,260 - -1.2
4,607,290 + +0.3
4,607,294 + -0.8
4,607,295 - +0.5
4,607,295 - -1.0
4,607,349 + -0.3
4,607,349 + +1.3
4,607,349 + -1.0
4,607,349 + -1.3
4,607,350 - -0.6
4,607,371 + -1.8
4,607,371 + +0.2
4,607,371 + -0.7
4,607,375 + -0.6
4,607,376 - -0.8
4,607,376 - -0.9
4,607,376 - -0.5
4,607,420 - +0.5
4,607,426 + -0.1
4,607,427 - -0.6
4,607,437 + -0.5
4,607,512 - CA264_19980 0.12 -0.5
4,607,552 + CA264_19980 0.16 +0.1
4,607,592 + CA264_19980 0.21 -0.2
4,607,592 + CA264_19980 0.21 +1.2
4,607,592 + CA264_19980 0.21 -0.1
4,607,593 - CA264_19980 0.21 -0.6
4,607,593 - CA264_19980 0.21 -0.3
4,607,725 + CA264_19980 0.37 +0.8
4,607,726 - CA264_19980 0.37 -0.1
4,607,731 + CA264_19980 0.37 -0.3
4,607,732 - CA264_19980 0.38 -1.4
4,607,732 - CA264_19980 0.38 +0.2
4,607,825 - CA264_19980 0.49 -1.2
4,607,918 - CA264_19980 0.59 -1.3
4,607,965 - CA264_19980 0.65 -0.7
4,607,965 - CA264_19980 0.65 -1.5
4,607,965 - CA264_19980 0.65 +0.2
4,608,003 - CA264_19980 0.69 +1.2
4,608,093 - CA264_19980 0.80 -1.3
4,608,143 - CA264_19980 0.86 +0.1
4,608,155 + CA264_19980 0.87 +0.7
4,608,155 + CA264_19980 0.87 -0.7

Or see this region's nucleotide sequence