Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_18825

Experiment: m.b. Dimethyl Sulfoxide 10 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_18815 and CA264_18820 are separated by 219 nucleotidesCA264_18820 and CA264_18825 are separated by 201 nucleotidesCA264_18825 and CA264_18830 are separated by 167 nucleotidesCA264_18830 and CA264_18835 are separated by 130 nucleotides CA264_18815: CA264_18815 - DHH family phosphoesterase, at 4,368,082 to 4,369,104 _18815 CA264_18820: CA264_18820 - nucleoside-diphosphate kinase, at 4,369,324 to 4,369,743 _18820 CA264_18825: CA264_18825 - hypothetical protein, at 4,369,945 to 4,370,319 _18825 CA264_18830: CA264_18830 - hypothetical protein, at 4,370,487 to 4,370,897 _18830 CA264_18835: CA264_18835 - MFS transporter, at 4,371,028 to 4,372,209 _18835 Position (kb) 4369 4370 4371Strain fitness (log2 ratio) -2 -1 0 1 2at 4369.115 kb on + strandat 4369.131 kb on + strandat 4369.139 kb on + strandat 4369.140 kb on - strandat 4369.163 kb on + strandat 4369.202 kb on + strandat 4369.203 kb on - strandat 4369.232 kb on + strandat 4369.238 kb on - strandat 4369.238 kb on - strandat 4369.239 kb on + strandat 4369.255 kb on + strandat 4369.255 kb on + strandat 4369.255 kb on + strandat 4369.255 kb on + strandat 4369.255 kb on + strandat 4369.256 kb on - strandat 4369.256 kb on - strandat 4369.256 kb on - strandat 4369.256 kb on - strandat 4369.258 kb on - strandat 4369.258 kb on - strandat 4369.287 kb on + strandat 4369.299 kb on + strandat 4369.757 kb on + strandat 4369.782 kb on + strandat 4369.782 kb on + strandat 4369.783 kb on - strandat 4369.813 kb on + strandat 4369.831 kb on - strandat 4369.946 kb on + strandat 4369.946 kb on + strandat 4370.008 kb on - strand, within CA264_18825at 4370.008 kb on - strand, within CA264_18825at 4370.024 kb on + strand, within CA264_18825at 4370.096 kb on - strand, within CA264_18825at 4370.103 kb on - strand, within CA264_18825at 4370.103 kb on - strand, within CA264_18825at 4370.196 kb on + strand, within CA264_18825at 4370.196 kb on + strand, within CA264_18825at 4370.388 kb on + strandat 4370.388 kb on + strandat 4370.389 kb on - strandat 4370.389 kb on - strandat 4370.393 kb on + strandat 4370.411 kb on + strandat 4370.411 kb on + strandat 4370.412 kb on - strandat 4370.455 kb on - strandat 4370.461 kb on - strandat 4370.461 kb on - strandat 4370.467 kb on + strandat 4370.472 kb on - strandat 4370.626 kb on + strand, within CA264_18830at 4370.626 kb on + strand, within CA264_18830at 4370.626 kb on + strand, within CA264_18830at 4370.783 kb on - strand, within CA264_18830at 4370.822 kb on - strand, within CA264_18830at 4370.896 kb on - strandat 4370.914 kb on - strandat 4370.918 kb on - strandat 4370.919 kb on + strandat 4370.919 kb on + strandat 4370.920 kb on - strandat 4370.920 kb on - strandat 4370.920 kb on - strandat 4370.920 kb on - strandat 4370.920 kb on - strandat 4370.923 kb on + strandat 4370.924 kb on - strandat 4370.924 kb on - strandat 4370.924 kb on - strandat 4370.924 kb on - strandat 4370.924 kb on - strandat 4370.924 kb on - strandat 4370.925 kb on + strandat 4370.925 kb on + strandat 4370.925 kb on + strandat 4371.007 kb on - strandat 4371.033 kb on + strandat 4371.117 kb on + strandat 4371.140 kb on - strandat 4371.174 kb on + strand, within CA264_18835at 4371.199 kb on - strand, within CA264_18835

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol%
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4,369,115 + -1.1
4,369,131 + +0.3
4,369,139 + -1.8
4,369,140 - -0.2
4,369,163 + +0.4
4,369,202 + -0.9
4,369,203 - -0.7
4,369,232 + -0.2
4,369,238 - -1.2
4,369,238 - -1.3
4,369,239 + +0.8
4,369,255 + -0.9
4,369,255 + +2.1
4,369,255 + -0.1
4,369,255 + +0.2
4,369,255 + +0.3
4,369,256 - +0.7
4,369,256 - -0.5
4,369,256 - -1.1
4,369,256 - +0.7
4,369,258 - +0.2
4,369,258 - -0.9
4,369,287 + -1.3
4,369,299 + -0.2
4,369,757 + -0.1
4,369,782 + +0.7
4,369,782 + +0.2
4,369,783 - -0.9
4,369,813 + -1.3
4,369,831 - -0.3
4,369,946 + -0.3
4,369,946 + +0.1
4,370,008 - CA264_18825 0.17 -0.4
4,370,008 - CA264_18825 0.17 -0.1
4,370,024 + CA264_18825 0.21 -1.1
4,370,096 - CA264_18825 0.40 -0.5
4,370,103 - CA264_18825 0.42 +0.9
4,370,103 - CA264_18825 0.42 -0.3
4,370,196 + CA264_18825 0.67 -0.3
4,370,196 + CA264_18825 0.67 +0.1
4,370,388 + +0.6
4,370,388 + +0.3
4,370,389 - +1.5
4,370,389 - -0.5
4,370,393 + +0.5
4,370,411 + -0.8
4,370,411 + -0.8
4,370,412 - +0.1
4,370,455 - +1.7
4,370,461 - +0.3
4,370,461 - -0.5
4,370,467 + +0.1
4,370,472 - -2.3
4,370,626 + CA264_18830 0.34 +0.9
4,370,626 + CA264_18830 0.34 -1.1
4,370,626 + CA264_18830 0.34 +0.3
4,370,783 - CA264_18830 0.72 +1.2
4,370,822 - CA264_18830 0.82 -1.1
4,370,896 - +1.2
4,370,914 - +0.0
4,370,918 - +0.6
4,370,919 + +0.5
4,370,919 + +0.2
4,370,920 - +0.6
4,370,920 - -0.2
4,370,920 - -0.3
4,370,920 - +0.7
4,370,920 - -0.1
4,370,923 + +0.1
4,370,924 - +0.5
4,370,924 - -1.4
4,370,924 - +0.7
4,370,924 - +0.1
4,370,924 - +1.2
4,370,924 - +1.2
4,370,925 + +0.1
4,370,925 + +0.5
4,370,925 + -0.1
4,371,007 - -0.0
4,371,033 + -0.0
4,371,117 + -0.8
4,371,140 - -0.2
4,371,174 + CA264_18835 0.12 +0.7
4,371,199 - CA264_18835 0.14 -0.1

Or see this region's nucleotide sequence