Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_15355
Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Dimethyl Sulfoxide 10 vol% |
---|---|---|---|---|---|
remove | |||||
3,596,377 | + | +0.1 | |||
3,596,651 | + | +1.5 | |||
3,596,661 | + | -0.8 | |||
3,596,984 | + | -0.3 | |||
3,596,996 | - | -0.8 | |||
3,596,996 | - | -1.4 | |||
3,597,329 | - | CA264_15355 | 0.20 | -2.7 | |
3,597,567 | + | CA264_15355 | 0.30 | -2.5 | |
3,597,621 | + | CA264_15355 | 0.32 | -1.5 | |
3,598,569 | - | CA264_15355 | 0.71 | -0.7 | |
3,599,107 | - | -1.7 | |||
3,599,334 | + | +1.4 | |||
3,599,513 | + | -0.1 | |||
3,599,514 | - | +0.5 | |||
3,599,516 | - | -0.4 | |||
3,599,543 | - | +0.9 | |||
3,599,559 | - | -0.6 | |||
3,599,585 | - | +0.0 | |||
3,599,596 | + | -0.0 | |||
3,599,596 | + | -0.1 | |||
3,599,736 | + | CA264_15360 | 0.22 | -0.7 | |
3,599,828 | + | CA264_15360 | 0.31 | -1.1 | |
3,599,842 | + | CA264_15360 | 0.33 | +0.4 | |
3,599,849 | - | CA264_15360 | 0.34 | -0.7 | |
3,599,887 | + | CA264_15360 | 0.38 | +0.3 | |
3,600,024 | + | CA264_15360 | 0.52 | +0.2 | |
3,600,044 | + | CA264_15360 | 0.54 | -0.1 | |
3,600,045 | - | CA264_15360 | 0.54 | +0.7 | |
3,600,139 | + | CA264_15360 | 0.64 | -1.1 |
Or see this region's nucleotide sequence