Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13715 and CA264_13720 are separated by 134 nucleotides CA264_13720 and CA264_13725 are separated by 2 nucleotides CA264_13725 and CA264_13730 are separated by 154 nucleotides CA264_13730 and CA264_13735 are separated by 78 nucleotides
CA264_13715: CA264_13715 - sorbosone dehydrogenase, at 3,205,817 to 3,207,022
_13715
CA264_13720: CA264_13720 - hypothetical protein, at 3,207,157 to 3,207,711
_13720
CA264_13725: CA264_13725 - alpha/beta hydrolase, at 3,207,714 to 3,208,517
_13725
CA264_13730: CA264_13730 - hypothetical protein, at 3,208,672 to 3,209,214
_13730
CA264_13735: CA264_13735 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, at 3,209,293 to 3,210,186
_13735
Position (kb)
3207
3208
3209 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3206.805 kb on + strand, within CA264_13715 at 3206.805 kb on + strand, within CA264_13715 at 3206.806 kb on - strand, within CA264_13715 at 3207.042 kb on + strand at 3207.042 kb on + strand at 3207.042 kb on + strand at 3207.050 kb on + strand at 3207.061 kb on - strand at 3207.099 kb on + strand at 3207.104 kb on + strand at 3207.105 kb on - strand at 3207.105 kb on - strand at 3207.108 kb on + strand at 3207.109 kb on - strand at 3207.109 kb on - strand at 3207.110 kb on + strand at 3207.124 kb on + strand at 3207.156 kb on + strand at 3207.195 kb on - strand at 3207.195 kb on - strand at 3207.387 kb on + strand, within CA264_13720 at 3207.388 kb on - strand, within CA264_13720 at 3207.388 kb on - strand, within CA264_13720 at 3207.388 kb on - strand, within CA264_13720 at 3207.437 kb on - strand, within CA264_13720 at 3207.500 kb on + strand, within CA264_13720 at 3207.513 kb on - strand, within CA264_13720 at 3207.632 kb on + strand, within CA264_13720 at 3207.668 kb on - strand at 3207.716 kb on - strand at 3207.894 kb on - strand, within CA264_13725 at 3208.023 kb on + strand, within CA264_13725 at 3208.029 kb on - strand, within CA264_13725 at 3208.030 kb on + strand, within CA264_13725 at 3208.031 kb on - strand, within CA264_13725 at 3208.129 kb on + strand, within CA264_13725 at 3208.179 kb on + strand, within CA264_13725 at 3208.369 kb on + strand, within CA264_13725 at 3208.369 kb on + strand, within CA264_13725 at 3208.369 kb on + strand, within CA264_13725 at 3208.370 kb on - strand, within CA264_13725 at 3208.378 kb on + strand, within CA264_13725 at 3208.411 kb on + strand, within CA264_13725 at 3208.412 kb on - strand, within CA264_13725 at 3208.412 kb on - strand, within CA264_13725 at 3208.480 kb on + strand at 3208.530 kb on + strand at 3208.530 kb on + strand at 3208.532 kb on + strand at 3208.532 kb on + strand at 3208.533 kb on - strand at 3208.533 kb on - strand at 3208.563 kb on + strand at 3208.564 kb on - strand at 3208.564 kb on - strand at 3208.567 kb on + strand at 3208.568 kb on - strand at 3208.573 kb on + strand at 3208.577 kb on - strand at 3208.577 kb on - strand at 3208.577 kb on - strand at 3208.577 kb on - strand at 3208.596 kb on + strand at 3208.597 kb on - strand at 3208.597 kb on - strand at 3208.597 kb on - strand at 3208.597 kb on - strand at 3208.623 kb on + strand at 3208.736 kb on + strand, within CA264_13730 at 3208.736 kb on + strand, within CA264_13730 at 3208.784 kb on + strand, within CA264_13730 at 3208.800 kb on - strand, within CA264_13730 at 3208.802 kb on - strand, within CA264_13730 at 3208.812 kb on + strand, within CA264_13730 at 3208.812 kb on + strand, within CA264_13730 at 3208.821 kb on + strand, within CA264_13730 at 3208.950 kb on + strand, within CA264_13730 at 3208.951 kb on - strand, within CA264_13730 at 3208.966 kb on - strand, within CA264_13730 at 3209.130 kb on + strand, within CA264_13730 at 3209.131 kb on - strand, within CA264_13730 at 3209.151 kb on + strand, within CA264_13730 at 3209.217 kb on + strand at 3209.217 kb on + strand at 3209.261 kb on + strand at 3209.262 kb on - strand at 3209.275 kb on - strand at 3209.321 kb on - strand at 3209.322 kb on + strand at 3209.323 kb on - strand at 3209.323 kb on - strand at 3209.323 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 3,206,805 + CA264_13715 0.82 -0.6 3,206,805 + CA264_13715 0.82 +0.8 3,206,806 - CA264_13715 0.82 -0.2 3,207,042 + +0.0 3,207,042 + +0.8 3,207,042 + -0.5 3,207,050 + -0.9 3,207,061 - -0.4 3,207,099 + +0.3 3,207,104 + +0.2 3,207,105 - +0.8 3,207,105 - +0.1 3,207,108 + +0.9 3,207,109 - -1.2 3,207,109 - +0.0 3,207,110 + +0.4 3,207,124 + +0.5 3,207,156 + -0.3 3,207,195 - -0.6 3,207,195 - +0.2 3,207,387 + CA264_13720 0.41 +0.2 3,207,388 - CA264_13720 0.42 -0.0 3,207,388 - CA264_13720 0.42 -0.1 3,207,388 - CA264_13720 0.42 +0.7 3,207,437 - CA264_13720 0.50 +2.0 3,207,500 + CA264_13720 0.62 +0.7 3,207,513 - CA264_13720 0.64 -0.3 3,207,632 + CA264_13720 0.86 +0.2 3,207,668 - +0.9 3,207,716 - -0.5 3,207,894 - CA264_13725 0.22 +0.2 3,208,023 + CA264_13725 0.38 +0.1 3,208,029 - CA264_13725 0.39 -1.2 3,208,030 + CA264_13725 0.39 -1.0 3,208,031 - CA264_13725 0.39 +0.4 3,208,129 + CA264_13725 0.52 -0.1 3,208,179 + CA264_13725 0.58 -0.0 3,208,369 + CA264_13725 0.81 +1.0 3,208,369 + CA264_13725 0.81 +0.1 3,208,369 + CA264_13725 0.81 +0.5 3,208,370 - CA264_13725 0.82 -0.3 3,208,378 + CA264_13725 0.83 +0.1 3,208,411 + CA264_13725 0.87 +0.6 3,208,412 - CA264_13725 0.87 +0.3 3,208,412 - CA264_13725 0.87 -1.3 3,208,480 + +1.3 3,208,530 + -0.1 3,208,530 + -1.5 3,208,532 + -0.1 3,208,532 + -0.9 3,208,533 - -1.2 3,208,533 - +0.3 3,208,563 + +0.1 3,208,564 - -0.7 3,208,564 - -0.8 3,208,567 + +0.3 3,208,568 - +0.1 3,208,573 + +0.7 3,208,577 - -0.4 3,208,577 - +0.1 3,208,577 - -1.8 3,208,577 - -0.4 3,208,596 + -1.6 3,208,597 - +1.9 3,208,597 - -0.1 3,208,597 - +0.2 3,208,597 - -1.2 3,208,623 + -0.9 3,208,736 + CA264_13730 0.12 +0.2 3,208,736 + CA264_13730 0.12 +0.1 3,208,784 + CA264_13730 0.21 -0.2 3,208,800 - CA264_13730 0.24 -0.3 3,208,802 - CA264_13730 0.24 -0.0 3,208,812 + CA264_13730 0.26 -0.0 3,208,812 + CA264_13730 0.26 +0.4 3,208,821 + CA264_13730 0.27 +0.0 3,208,950 + CA264_13730 0.51 +0.5 3,208,951 - CA264_13730 0.51 -0.6 3,208,966 - CA264_13730 0.54 -0.3 3,209,130 + CA264_13730 0.84 +0.2 3,209,131 - CA264_13730 0.85 -0.2 3,209,151 + CA264_13730 0.88 -0.1 3,209,217 + +0.1 3,209,217 + -0.0 3,209,261 + +0.0 3,209,262 - -1.1 3,209,275 - +1.6 3,209,321 - +0.2 3,209,322 + -2.0 3,209,323 - +0.7 3,209,323 - +0.1 3,209,323 - -0.7
Or see this region's nucleotide sequence