Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_10515

Experiment: m.b. Dimethyl Sulfoxide 10 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_10505 and CA264_10510 overlap by 4 nucleotidesCA264_10510 and CA264_10515 are separated by 332 nucleotidesCA264_10515 and CA264_10520 are separated by 12 nucleotidesCA264_10520 and CA264_10525 are separated by 12 nucleotides CA264_10505: CA264_10505 - FAD-binding molybdopterin dehydrogenase, at 2,436,518 to 2,437,513 _10505 CA264_10510: CA264_10510 - (2Fe-2S)-binding protein, at 2,437,510 to 2,438,010 _10510 CA264_10515: CA264_10515 - anion permease, at 2,438,343 to 2,439,101 _10515 CA264_10520: CA264_10520 - molybdopterin synthase sulfur carrier subunit, at 2,439,114 to 2,439,356 _10520 CA264_10525: CA264_10525 - molybdenum cofactor biosynthesis protein MoaE, at 2,439,369 to 2,439,785 _10525 Position (kb) 2438 2439 2440Strain fitness (log2 ratio) -1 0 1 2at 2437.387 kb on + strand, within CA264_10505at 2437.495 kb on + strandat 2437.497 kb on + strandat 2437.497 kb on + strandat 2437.497 kb on + strandat 2437.497 kb on + strandat 2437.497 kb on + strandat 2437.498 kb on - strandat 2437.501 kb on + strandat 2437.552 kb on + strandat 2437.561 kb on + strand, within CA264_10510at 2437.562 kb on - strand, within CA264_10510at 2437.562 kb on - strand, within CA264_10510at 2437.565 kb on + strand, within CA264_10510at 2437.566 kb on - strand, within CA264_10510at 2437.607 kb on - strand, within CA264_10510at 2437.607 kb on - strand, within CA264_10510at 2437.608 kb on + strand, within CA264_10510at 2437.660 kb on + strand, within CA264_10510at 2437.660 kb on + strand, within CA264_10510at 2437.661 kb on - strand, within CA264_10510at 2437.675 kb on - strand, within CA264_10510at 2437.729 kb on + strand, within CA264_10510at 2437.730 kb on - strand, within CA264_10510at 2437.730 kb on - strand, within CA264_10510at 2437.730 kb on - strand, within CA264_10510at 2437.987 kb on + strandat 2437.987 kb on + strandat 2437.988 kb on - strandat 2438.190 kb on - strandat 2438.190 kb on - strandat 2438.241 kb on - strandat 2438.257 kb on - strandat 2438.267 kb on - strandat 2438.307 kb on + strandat 2438.307 kb on + strandat 2438.307 kb on + strandat 2438.467 kb on + strand, within CA264_10515at 2438.656 kb on + strand, within CA264_10515at 2438.657 kb on - strand, within CA264_10515at 2438.659 kb on + strand, within CA264_10515at 2438.694 kb on + strand, within CA264_10515at 2438.737 kb on - strand, within CA264_10515at 2438.737 kb on - strand, within CA264_10515at 2438.879 kb on + strand, within CA264_10515at 2438.887 kb on + strand, within CA264_10515at 2438.888 kb on - strand, within CA264_10515at 2438.888 kb on - strand, within CA264_10515at 2438.938 kb on + strand, within CA264_10515at 2439.014 kb on + strand, within CA264_10515at 2439.073 kb on + strandat 2439.073 kb on + strandat 2439.085 kb on - strandat 2439.121 kb on + strandat 2439.121 kb on + strandat 2439.235 kb on - strand, within CA264_10520at 2439.263 kb on + strand, within CA264_10520at 2439.285 kb on + strand, within CA264_10520at 2439.344 kb on - strandat 2439.370 kb on - strandat 2439.373 kb on + strandat 2439.374 kb on - strandat 2439.378 kb on - strandat 2439.378 kb on - strandat 2439.379 kb on + strandat 2439.379 kb on + strandat 2439.380 kb on - strandat 2439.380 kb on - strandat 2439.523 kb on - strand, within CA264_10525at 2439.523 kb on - strand, within CA264_10525at 2439.794 kb on + strandat 2439.795 kb on - strandat 2439.795 kb on - strandat 2439.795 kb on - strandat 2439.795 kb on - strandat 2439.878 kb on + strandat 2439.883 kb on + strandat 2439.920 kb on - strandat 2440.037 kb on + strandat 2440.038 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol%
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2,437,387 + CA264_10505 0.87 -0.4
2,437,495 + +1.1
2,437,497 + +0.8
2,437,497 + -0.6
2,437,497 + -0.5
2,437,497 + +0.3
2,437,497 + +0.7
2,437,498 - -0.9
2,437,501 + +0.3
2,437,552 + +0.1
2,437,561 + CA264_10510 0.10 -0.9
2,437,562 - CA264_10510 0.10 +0.4
2,437,562 - CA264_10510 0.10 +0.2
2,437,565 + CA264_10510 0.11 -0.1
2,437,566 - CA264_10510 0.11 +0.1
2,437,607 - CA264_10510 0.19 -0.3
2,437,607 - CA264_10510 0.19 +0.3
2,437,608 + CA264_10510 0.20 -0.4
2,437,660 + CA264_10510 0.30 -1.1
2,437,660 + CA264_10510 0.30 +0.1
2,437,661 - CA264_10510 0.30 -0.4
2,437,675 - CA264_10510 0.33 -0.6
2,437,729 + CA264_10510 0.44 -0.5
2,437,730 - CA264_10510 0.44 +0.2
2,437,730 - CA264_10510 0.44 -0.4
2,437,730 - CA264_10510 0.44 +0.7
2,437,987 + -0.6
2,437,987 + -0.3
2,437,988 - -0.6
2,438,190 - -1.1
2,438,190 - +0.1
2,438,241 - +0.6
2,438,257 - -1.1
2,438,267 - +0.3
2,438,307 + +0.9
2,438,307 + +0.9
2,438,307 + +0.2
2,438,467 + CA264_10515 0.16 +0.7
2,438,656 + CA264_10515 0.41 +0.7
2,438,657 - CA264_10515 0.41 +0.3
2,438,659 + CA264_10515 0.42 +0.9
2,438,694 + CA264_10515 0.46 -0.9
2,438,737 - CA264_10515 0.52 +1.3
2,438,737 - CA264_10515 0.52 +0.2
2,438,879 + CA264_10515 0.71 +0.5
2,438,887 + CA264_10515 0.72 -0.4
2,438,888 - CA264_10515 0.72 +0.6
2,438,888 - CA264_10515 0.72 -0.8
2,438,938 + CA264_10515 0.78 +0.0
2,439,014 + CA264_10515 0.88 +1.1
2,439,073 + -0.2
2,439,073 + +0.9
2,439,085 - -0.0
2,439,121 + -0.1
2,439,121 + -0.0
2,439,235 - CA264_10520 0.50 +0.3
2,439,263 + CA264_10520 0.61 +0.4
2,439,285 + CA264_10520 0.70 +0.5
2,439,344 - -0.2
2,439,370 - +0.1
2,439,373 + +0.4
2,439,374 - -0.5
2,439,378 - +0.5
2,439,378 - +0.2
2,439,379 + +2.0
2,439,379 + +0.8
2,439,380 - +1.6
2,439,380 - -0.2
2,439,523 - CA264_10525 0.37 -0.0
2,439,523 - CA264_10525 0.37 -0.4
2,439,794 + +0.3
2,439,795 - +0.1
2,439,795 - +0.2
2,439,795 - +0.8
2,439,795 - +0.4
2,439,878 + +0.8
2,439,883 + -0.7
2,439,920 - -1.1
2,440,037 + -0.3
2,440,038 - +0.0

Or see this region's nucleotide sequence