Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10300 and CA264_10305 are separated by 76 nucleotides CA264_10305 and CA264_10310 are separated by 280 nucleotides
CA264_10300: CA264_10300 - RagB/SusD family nutrient uptake outer membrane protein, at 2,394,899 to 2,396,257
_10300
CA264_10305: CA264_10305 - hypothetical protein, at 2,396,334 to 2,396,630
_10305
CA264_10310: CA264_10310 - hypothetical protein, at 2,396,911 to 2,397,492
_10310
Position (kb)
2396
2397 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2395.364 kb on + strand, within CA264_10300 at 2395.460 kb on + strand, within CA264_10300 at 2395.460 kb on + strand, within CA264_10300 at 2395.461 kb on - strand, within CA264_10300 at 2395.625 kb on - strand, within CA264_10300 at 2395.676 kb on + strand, within CA264_10300 at 2395.776 kb on - strand, within CA264_10300 at 2395.784 kb on + strand, within CA264_10300 at 2395.841 kb on + strand, within CA264_10300 at 2395.842 kb on - strand, within CA264_10300 at 2395.842 kb on - strand, within CA264_10300 at 2395.859 kb on + strand, within CA264_10300 at 2395.859 kb on + strand, within CA264_10300 at 2395.860 kb on - strand, within CA264_10300 at 2395.907 kb on + strand, within CA264_10300 at 2395.907 kb on + strand, within CA264_10300 at 2395.907 kb on + strand, within CA264_10300 at 2395.908 kb on - strand, within CA264_10300 at 2395.929 kb on - strand, within CA264_10300 at 2396.138 kb on - strand at 2396.169 kb on - strand at 2396.321 kb on + strand at 2396.497 kb on + strand, within CA264_10305 at 2396.498 kb on - strand, within CA264_10305 at 2396.613 kb on + strand at 2396.614 kb on - strand at 2396.686 kb on + strand at 2396.768 kb on - strand at 2396.820 kb on + strand at 2396.821 kb on - strand at 2396.852 kb on + strand at 2396.959 kb on + strand at 2396.959 kb on + strand at 2396.963 kb on + strand at 2397.112 kb on + strand, within CA264_10310 at 2397.151 kb on + strand, within CA264_10310 at 2397.151 kb on + strand, within CA264_10310 at 2397.151 kb on + strand, within CA264_10310 at 2397.152 kb on - strand, within CA264_10310 at 2397.152 kb on - strand, within CA264_10310 at 2397.173 kb on + strand, within CA264_10310 at 2397.174 kb on - strand, within CA264_10310 at 2397.203 kb on + strand, within CA264_10310 at 2397.203 kb on + strand, within CA264_10310 at 2397.422 kb on + strand, within CA264_10310 at 2397.423 kb on - strand, within CA264_10310 at 2397.452 kb on + strand at 2397.452 kb on + strand at 2397.452 kb on + strand at 2397.452 kb on + strand at 2397.452 kb on + strand at 2397.453 kb on - strand at 2397.535 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 2,395,364 + CA264_10300 0.34 -0.3 2,395,460 + CA264_10300 0.41 -0.7 2,395,460 + CA264_10300 0.41 -0.2 2,395,461 - CA264_10300 0.41 -0.7 2,395,625 - CA264_10300 0.53 -0.3 2,395,676 + CA264_10300 0.57 -0.1 2,395,776 - CA264_10300 0.65 -0.2 2,395,784 + CA264_10300 0.65 +0.4 2,395,841 + CA264_10300 0.69 +0.6 2,395,842 - CA264_10300 0.69 -0.6 2,395,842 - CA264_10300 0.69 -0.2 2,395,859 + CA264_10300 0.71 -1.5 2,395,859 + CA264_10300 0.71 +0.2 2,395,860 - CA264_10300 0.71 -0.6 2,395,907 + CA264_10300 0.74 -0.1 2,395,907 + CA264_10300 0.74 -0.6 2,395,907 + CA264_10300 0.74 -0.2 2,395,908 - CA264_10300 0.74 +0.4 2,395,929 - CA264_10300 0.76 -0.1 2,396,138 - +1.0 2,396,169 - -0.2 2,396,321 + -0.6 2,396,497 + CA264_10305 0.55 -2.1 2,396,498 - CA264_10305 0.55 -1.2 2,396,613 + +0.2 2,396,614 - +0.4 2,396,686 + +0.7 2,396,768 - +1.0 2,396,820 + +0.1 2,396,821 - +0.8 2,396,852 + +1.0 2,396,959 + -2.2 2,396,959 + +0.1 2,396,963 + -0.2 2,397,112 + CA264_10310 0.35 +0.4 2,397,151 + CA264_10310 0.41 +0.5 2,397,151 + CA264_10310 0.41 -0.1 2,397,151 + CA264_10310 0.41 -0.8 2,397,152 - CA264_10310 0.41 -0.4 2,397,152 - CA264_10310 0.41 +0.2 2,397,173 + CA264_10310 0.45 -0.3 2,397,174 - CA264_10310 0.45 -0.8 2,397,203 + CA264_10310 0.50 -0.3 2,397,203 + CA264_10310 0.50 -0.2 2,397,422 + CA264_10310 0.88 -0.1 2,397,423 - CA264_10310 0.88 +1.9 2,397,452 + -0.3 2,397,452 + -0.5 2,397,452 + +2.0 2,397,452 + +0.0 2,397,452 + +0.8 2,397,453 - +0.6 2,397,535 + +0.5
Or see this region's nucleotide sequence