Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_10210

Experiment: m.b. Dimethyl Sulfoxide 10 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_10205 and CA264_10210 are separated by 191 nucleotidesCA264_10210 and CA264_10215 are separated by 5 nucleotidesCA264_10215 and CA264_10220 overlap by 14 nucleotides CA264_10205: CA264_10205 - hypothetical protein, at 2,370,769 to 2,371,638 _10205 CA264_10210: CA264_10210 - hypothetical protein, at 2,371,830 to 2,372,429 _10210 CA264_10215: CA264_10215 - hypothetical protein, at 2,372,435 to 2,372,842 _10215 CA264_10220: CA264_10220 - hypothetical protein, at 2,372,829 to 2,373,602 _10220 Position (kb) 2371 2372 2373Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 2370.874 kb on + strand, within CA264_10205at 2370.875 kb on - strand, within CA264_10205at 2370.875 kb on - strand, within CA264_10205at 2370.893 kb on + strand, within CA264_10205at 2370.894 kb on - strand, within CA264_10205at 2370.932 kb on - strand, within CA264_10205at 2370.963 kb on + strand, within CA264_10205at 2370.963 kb on + strand, within CA264_10205at 2370.964 kb on - strand, within CA264_10205at 2370.964 kb on - strand, within CA264_10205at 2370.964 kb on - strand, within CA264_10205at 2370.964 kb on - strand, within CA264_10205at 2370.964 kb on - strand, within CA264_10205at 2370.967 kb on + strand, within CA264_10205at 2371.024 kb on + strand, within CA264_10205at 2371.050 kb on + strand, within CA264_10205at 2371.051 kb on - strand, within CA264_10205at 2371.070 kb on + strand, within CA264_10205at 2371.071 kb on - strand, within CA264_10205at 2371.105 kb on + strand, within CA264_10205at 2371.142 kb on + strand, within CA264_10205at 2371.142 kb on + strand, within CA264_10205at 2371.143 kb on - strand, within CA264_10205at 2371.143 kb on - strand, within CA264_10205at 2371.154 kb on - strand, within CA264_10205at 2371.195 kb on + strand, within CA264_10205at 2371.195 kb on + strand, within CA264_10205at 2371.196 kb on - strand, within CA264_10205at 2371.197 kb on + strand, within CA264_10205at 2371.197 kb on + strand, within CA264_10205at 2371.218 kb on + strand, within CA264_10205at 2371.234 kb on - strand, within CA264_10205at 2371.255 kb on + strand, within CA264_10205at 2371.261 kb on + strand, within CA264_10205at 2371.261 kb on + strand, within CA264_10205at 2371.261 kb on + strand, within CA264_10205at 2371.261 kb on + strand, within CA264_10205at 2371.261 kb on + strand, within CA264_10205at 2371.261 kb on + strand, within CA264_10205at 2371.262 kb on - strand, within CA264_10205at 2371.262 kb on - strand, within CA264_10205at 2371.264 kb on + strand, within CA264_10205at 2371.264 kb on + strand, within CA264_10205at 2371.264 kb on + strand, within CA264_10205at 2371.272 kb on + strand, within CA264_10205at 2371.308 kb on + strand, within CA264_10205at 2371.309 kb on - strand, within CA264_10205at 2371.319 kb on + strand, within CA264_10205at 2371.320 kb on - strand, within CA264_10205at 2371.320 kb on - strand, within CA264_10205at 2371.340 kb on - strand, within CA264_10205at 2371.392 kb on + strand, within CA264_10205at 2371.392 kb on + strand, within CA264_10205at 2371.393 kb on - strand, within CA264_10205at 2371.426 kb on - strand, within CA264_10205at 2371.444 kb on - strand, within CA264_10205at 2371.452 kb on + strand, within CA264_10205at 2371.486 kb on + strand, within CA264_10205at 2371.499 kb on - strand, within CA264_10205at 2371.504 kb on + strand, within CA264_10205at 2371.521 kb on + strand, within CA264_10205at 2371.522 kb on - strand, within CA264_10205at 2371.522 kb on - strand, within CA264_10205at 2371.530 kb on + strand, within CA264_10205at 2371.532 kb on + strand, within CA264_10205at 2371.533 kb on - strand, within CA264_10205at 2371.533 kb on - strand, within CA264_10205at 2371.556 kb on - strandat 2371.556 kb on - strandat 2371.556 kb on - strandat 2371.562 kb on - strandat 2371.587 kb on + strandat 2371.638 kb on + strandat 2371.639 kb on - strandat 2371.690 kb on + strandat 2371.765 kb on + strandat 2371.765 kb on + strandat 2371.824 kb on - strandat 2371.829 kb on + strandat 2371.837 kb on + strandat 2371.837 kb on + strandat 2371.842 kb on - strandat 2371.845 kb on + strandat 2371.848 kb on + strandat 2371.879 kb on + strandat 2371.886 kb on + strandat 2371.916 kb on + strand, within CA264_10210at 2371.954 kb on + strand, within CA264_10210at 2371.981 kb on + strand, within CA264_10210at 2371.981 kb on + strand, within CA264_10210at 2371.981 kb on + strand, within CA264_10210at 2371.981 kb on + strand, within CA264_10210at 2371.982 kb on - strand, within CA264_10210at 2372.004 kb on + strand, within CA264_10210at 2372.004 kb on + strand, within CA264_10210at 2372.004 kb on + strand, within CA264_10210at 2372.005 kb on - strand, within CA264_10210at 2372.005 kb on - strand, within CA264_10210at 2372.015 kb on - strand, within CA264_10210at 2372.092 kb on + strand, within CA264_10210at 2372.092 kb on + strand, within CA264_10210at 2372.092 kb on + strand, within CA264_10210at 2372.092 kb on + strand, within CA264_10210at 2372.093 kb on - strand, within CA264_10210at 2372.096 kb on + strand, within CA264_10210at 2372.096 kb on + strand, within CA264_10210at 2372.096 kb on + strand, within CA264_10210at 2372.096 kb on + strand, within CA264_10210at 2372.096 kb on + strand, within CA264_10210at 2372.102 kb on + strand, within CA264_10210at 2372.102 kb on + strand, within CA264_10210at 2372.102 kb on + strand, within CA264_10210at 2372.103 kb on - strand, within CA264_10210at 2372.116 kb on + strand, within CA264_10210at 2372.117 kb on - strand, within CA264_10210at 2372.125 kb on + strand, within CA264_10210at 2372.235 kb on + strand, within CA264_10210at 2372.235 kb on + strand, within CA264_10210at 2372.236 kb on - strand, within CA264_10210at 2372.254 kb on + strand, within CA264_10210at 2372.254 kb on + strand, within CA264_10210at 2372.254 kb on + strand, within CA264_10210at 2372.257 kb on + strand, within CA264_10210at 2372.269 kb on + strand, within CA264_10210at 2372.270 kb on - strand, within CA264_10210at 2372.410 kb on + strandat 2372.411 kb on - strandat 2372.680 kb on + strand, within CA264_10215at 2372.848 kb on + strandat 2372.866 kb on + strandat 2372.866 kb on + strandat 2372.866 kb on + strandat 2372.920 kb on + strand, within CA264_10220at 2373.005 kb on + strand, within CA264_10220at 2373.008 kb on + strand, within CA264_10220at 2373.008 kb on + strand, within CA264_10220at 2373.020 kb on + strand, within CA264_10220at 2373.020 kb on + strand, within CA264_10220at 2373.020 kb on + strand, within CA264_10220at 2373.023 kb on + strand, within CA264_10220at 2373.023 kb on + strand, within CA264_10220at 2373.024 kb on - strand, within CA264_10220at 2373.024 kb on - strand, within CA264_10220at 2373.024 kb on - strand, within CA264_10220at 2373.024 kb on - strand, within CA264_10220at 2373.027 kb on + strand, within CA264_10220at 2373.116 kb on + strand, within CA264_10220at 2373.116 kb on + strand, within CA264_10220at 2373.137 kb on + strand, within CA264_10220at 2373.138 kb on - strand, within CA264_10220at 2373.138 kb on - strand, within CA264_10220at 2373.184 kb on + strand, within CA264_10220at 2373.184 kb on + strand, within CA264_10220at 2373.207 kb on - strand, within CA264_10220at 2373.234 kb on - strand, within CA264_10220at 2373.234 kb on - strand, within CA264_10220at 2373.265 kb on - strand, within CA264_10220at 2373.265 kb on - strand, within CA264_10220at 2373.300 kb on + strand, within CA264_10220at 2373.331 kb on + strand, within CA264_10220at 2373.331 kb on + strand, within CA264_10220at 2373.331 kb on + strand, within CA264_10220at 2373.334 kb on + strand, within CA264_10220at 2373.335 kb on - strand, within CA264_10220at 2373.337 kb on - strand, within CA264_10220at 2373.357 kb on - strand, within CA264_10220at 2373.401 kb on + strand, within CA264_10220at 2373.402 kb on - strand, within CA264_10220at 2373.405 kb on - strand, within CA264_10220at 2373.423 kb on + strand, within CA264_10220at 2373.426 kb on - strand, within CA264_10220at 2373.426 kb on - strand, within CA264_10220

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol%
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2,370,874 + CA264_10205 0.12 -0.1
2,370,875 - CA264_10205 0.12 +0.0
2,370,875 - CA264_10205 0.12 -1.0
2,370,893 + CA264_10205 0.14 -0.6
2,370,894 - CA264_10205 0.14 -0.3
2,370,932 - CA264_10205 0.19 +0.7
2,370,963 + CA264_10205 0.22 -0.6
2,370,963 + CA264_10205 0.22 +0.3
2,370,964 - CA264_10205 0.22 -0.2
2,370,964 - CA264_10205 0.22 +0.2
2,370,964 - CA264_10205 0.22 +0.3
2,370,964 - CA264_10205 0.22 -0.6
2,370,964 - CA264_10205 0.22 +0.4
2,370,967 + CA264_10205 0.23 -0.8
2,371,024 + CA264_10205 0.29 +1.6
2,371,050 + CA264_10205 0.32 +0.0
2,371,051 - CA264_10205 0.32 +0.1
2,371,070 + CA264_10205 0.35 +0.2
2,371,071 - CA264_10205 0.35 +0.4
2,371,105 + CA264_10205 0.39 -0.7
2,371,142 + CA264_10205 0.43 +1.1
2,371,142 + CA264_10205 0.43 +0.2
2,371,143 - CA264_10205 0.43 -0.0
2,371,143 - CA264_10205 0.43 +0.8
2,371,154 - CA264_10205 0.44 -1.2
2,371,195 + CA264_10205 0.49 +0.3
2,371,195 + CA264_10205 0.49 -0.6
2,371,196 - CA264_10205 0.49 -0.6
2,371,197 + CA264_10205 0.49 +1.3
2,371,197 + CA264_10205 0.49 -0.2
2,371,218 + CA264_10205 0.52 +0.2
2,371,234 - CA264_10205 0.53 -0.8
2,371,255 + CA264_10205 0.56 +1.3
2,371,261 + CA264_10205 0.57 +0.5
2,371,261 + CA264_10205 0.57 -1.1
2,371,261 + CA264_10205 0.57 -0.8
2,371,261 + CA264_10205 0.57 +0.1
2,371,261 + CA264_10205 0.57 -0.1
2,371,261 + CA264_10205 0.57 -0.9
2,371,262 - CA264_10205 0.57 -0.2
2,371,262 - CA264_10205 0.57 -0.3
2,371,264 + CA264_10205 0.57 -0.4
2,371,264 + CA264_10205 0.57 -2.0
2,371,264 + CA264_10205 0.57 +0.4
2,371,272 + CA264_10205 0.58 -0.2
2,371,308 + CA264_10205 0.62 -1.4
2,371,309 - CA264_10205 0.62 -0.1
2,371,319 + CA264_10205 0.63 -0.8
2,371,320 - CA264_10205 0.63 -1.2
2,371,320 - CA264_10205 0.63 -0.2
2,371,340 - CA264_10205 0.66 -0.0
2,371,392 + CA264_10205 0.72 -0.4
2,371,392 + CA264_10205 0.72 -0.2
2,371,393 - CA264_10205 0.72 -0.3
2,371,426 - CA264_10205 0.76 -2.0
2,371,444 - CA264_10205 0.78 +0.2
2,371,452 + CA264_10205 0.79 -1.0
2,371,486 + CA264_10205 0.82 +0.7
2,371,499 - CA264_10205 0.84 +0.2
2,371,504 + CA264_10205 0.84 -0.2
2,371,521 + CA264_10205 0.86 -0.2
2,371,522 - CA264_10205 0.87 -0.9
2,371,522 - CA264_10205 0.87 +0.0
2,371,530 + CA264_10205 0.87 +1.3
2,371,532 + CA264_10205 0.88 -1.0
2,371,533 - CA264_10205 0.88 -0.3
2,371,533 - CA264_10205 0.88 +0.3
2,371,556 - -0.2
2,371,556 - -0.8
2,371,556 - -0.4
2,371,562 - -0.5
2,371,587 + -0.6
2,371,638 + -1.8
2,371,639 - -3.5
2,371,690 + -2.2
2,371,765 + -0.3
2,371,765 + -3.3
2,371,824 - -0.7
2,371,829 + -2.2
2,371,837 + +0.7
2,371,837 + -0.0
2,371,842 - -1.3
2,371,845 + -2.5
2,371,848 + -0.5
2,371,879 + -0.4
2,371,886 + -1.0
2,371,916 + CA264_10210 0.14 -0.9
2,371,954 + CA264_10210 0.21 -1.2
2,371,981 + CA264_10210 0.25 -2.5
2,371,981 + CA264_10210 0.25 -2.0
2,371,981 + CA264_10210 0.25 -2.4
2,371,981 + CA264_10210 0.25 -0.6
2,371,982 - CA264_10210 0.25 -4.7
2,372,004 + CA264_10210 0.29 -1.9
2,372,004 + CA264_10210 0.29 -2.3
2,372,004 + CA264_10210 0.29 -2.2
2,372,005 - CA264_10210 0.29 -1.2
2,372,005 - CA264_10210 0.29 -1.9
2,372,015 - CA264_10210 0.31 -1.4
2,372,092 + CA264_10210 0.44 -0.2
2,372,092 + CA264_10210 0.44 -0.9
2,372,092 + CA264_10210 0.44 -1.1
2,372,092 + CA264_10210 0.44 -0.2
2,372,093 - CA264_10210 0.44 -2.1
2,372,096 + CA264_10210 0.44 -1.1
2,372,096 + CA264_10210 0.44 -1.2
2,372,096 + CA264_10210 0.44 -0.6
2,372,096 + CA264_10210 0.44 -0.6
2,372,096 + CA264_10210 0.44 -0.7
2,372,102 + CA264_10210 0.45 -1.1
2,372,102 + CA264_10210 0.45 -1.2
2,372,102 + CA264_10210 0.45 -0.8
2,372,103 - CA264_10210 0.46 -2.9
2,372,116 + CA264_10210 0.48 -1.1
2,372,117 - CA264_10210 0.48 -3.1
2,372,125 + CA264_10210 0.49 +0.2
2,372,235 + CA264_10210 0.68 +1.1
2,372,235 + CA264_10210 0.68 +0.3
2,372,236 - CA264_10210 0.68 -2.8
2,372,254 + CA264_10210 0.71 +0.3
2,372,254 + CA264_10210 0.71 -0.1
2,372,254 + CA264_10210 0.71 -0.0
2,372,257 + CA264_10210 0.71 +0.4
2,372,269 + CA264_10210 0.73 -0.7
2,372,270 - CA264_10210 0.73 -2.8
2,372,410 + -1.2
2,372,411 - +0.6
2,372,680 + CA264_10215 0.60 -1.3
2,372,848 + +0.5
2,372,866 + +0.4
2,372,866 + -0.0
2,372,866 + +0.5
2,372,920 + CA264_10220 0.12 -0.4
2,373,005 + CA264_10220 0.23 +0.0
2,373,008 + CA264_10220 0.23 +1.1
2,373,008 + CA264_10220 0.23 +0.4
2,373,020 + CA264_10220 0.25 -0.2
2,373,020 + CA264_10220 0.25 -0.2
2,373,020 + CA264_10220 0.25 -0.1
2,373,023 + CA264_10220 0.25 -0.2
2,373,023 + CA264_10220 0.25 -0.2
2,373,024 - CA264_10220 0.25 -1.2
2,373,024 - CA264_10220 0.25 -0.5
2,373,024 - CA264_10220 0.25 -0.7
2,373,024 - CA264_10220 0.25 -1.6
2,373,027 + CA264_10220 0.26 -0.3
2,373,116 + CA264_10220 0.37 -0.3
2,373,116 + CA264_10220 0.37 +0.3
2,373,137 + CA264_10220 0.40 +0.2
2,373,138 - CA264_10220 0.40 -0.0
2,373,138 - CA264_10220 0.40 -0.9
2,373,184 + CA264_10220 0.46 -0.5
2,373,184 + CA264_10220 0.46 -1.3
2,373,207 - CA264_10220 0.49 +0.2
2,373,234 - CA264_10220 0.52 +0.3
2,373,234 - CA264_10220 0.52 -2.2
2,373,265 - CA264_10220 0.56 -1.1
2,373,265 - CA264_10220 0.56 -0.6
2,373,300 + CA264_10220 0.61 -0.2
2,373,331 + CA264_10220 0.65 -0.8
2,373,331 + CA264_10220 0.65 -0.4
2,373,331 + CA264_10220 0.65 +0.6
2,373,334 + CA264_10220 0.65 +0.0
2,373,335 - CA264_10220 0.65 -0.5
2,373,337 - CA264_10220 0.66 -0.3
2,373,357 - CA264_10220 0.68 +0.6
2,373,401 + CA264_10220 0.74 -0.9
2,373,402 - CA264_10220 0.74 -0.3
2,373,405 - CA264_10220 0.74 -1.4
2,373,423 + CA264_10220 0.77 +0.1
2,373,426 - CA264_10220 0.77 -0.9
2,373,426 - CA264_10220 0.77 -0.1

Or see this region's nucleotide sequence