Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_09850

Experiment: m.b. Dimethyl Sulfoxide 10 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_09845 and CA264_09850 are separated by 14 nucleotidesCA264_09850 and CA264_09855 overlap by 11 nucleotides CA264_09845: CA264_09845 - LLM class flavin-dependent oxidoreductase, at 2,290,184 to 2,291,098 _09845 CA264_09850: CA264_09850 - hypothetical protein, at 2,291,113 to 2,292,294 _09850 CA264_09855: CA264_09855 - hypothetical protein, at 2,292,284 to 2,293,516 _09855 Position (kb) 2291 2292 2293Strain fitness (log2 ratio) -2 -1 0 1 2at 2290.140 kb on - strandat 2290.143 kb on + strandat 2290.265 kb on + strandat 2290.266 kb on - strandat 2290.266 kb on - strandat 2290.314 kb on + strand, within CA264_09845at 2290.315 kb on - strand, within CA264_09845at 2290.315 kb on - strand, within CA264_09845at 2290.344 kb on + strand, within CA264_09845at 2290.345 kb on - strand, within CA264_09845at 2290.345 kb on - strand, within CA264_09845at 2290.397 kb on + strand, within CA264_09845at 2290.553 kb on + strand, within CA264_09845at 2290.553 kb on + strand, within CA264_09845at 2290.553 kb on + strand, within CA264_09845at 2290.553 kb on + strand, within CA264_09845at 2290.553 kb on + strand, within CA264_09845at 2290.554 kb on - strand, within CA264_09845at 2290.554 kb on - strand, within CA264_09845at 2290.557 kb on + strand, within CA264_09845at 2290.557 kb on + strand, within CA264_09845at 2290.558 kb on - strand, within CA264_09845at 2290.607 kb on + strand, within CA264_09845at 2290.608 kb on - strand, within CA264_09845at 2290.714 kb on + strand, within CA264_09845at 2290.751 kb on + strand, within CA264_09845at 2290.787 kb on + strand, within CA264_09845at 2290.807 kb on - strand, within CA264_09845at 2290.826 kb on - strand, within CA264_09845at 2290.863 kb on - strand, within CA264_09845at 2290.889 kb on + strand, within CA264_09845at 2290.890 kb on - strand, within CA264_09845at 2290.890 kb on - strand, within CA264_09845at 2290.960 kb on - strand, within CA264_09845at 2290.997 kb on + strand, within CA264_09845at 2291.081 kb on + strandat 2291.295 kb on - strand, within CA264_09850at 2291.295 kb on - strand, within CA264_09850at 2291.359 kb on + strand, within CA264_09850at 2291.380 kb on + strand, within CA264_09850at 2291.391 kb on + strand, within CA264_09850at 2291.392 kb on - strand, within CA264_09850at 2291.392 kb on - strand, within CA264_09850at 2291.392 kb on - strand, within CA264_09850at 2291.412 kb on + strand, within CA264_09850at 2291.413 kb on - strand, within CA264_09850at 2291.413 kb on - strand, within CA264_09850at 2291.482 kb on - strand, within CA264_09850at 2291.482 kb on - strand, within CA264_09850at 2291.482 kb on - strand, within CA264_09850at 2291.574 kb on + strand, within CA264_09850at 2291.575 kb on - strand, within CA264_09850at 2291.583 kb on - strand, within CA264_09850at 2291.592 kb on - strand, within CA264_09850at 2291.635 kb on + strand, within CA264_09850at 2291.635 kb on + strand, within CA264_09850at 2291.646 kb on - strand, within CA264_09850at 2291.704 kb on + strand, within CA264_09850at 2291.723 kb on + strand, within CA264_09850at 2291.723 kb on + strand, within CA264_09850at 2291.724 kb on - strand, within CA264_09850at 2291.724 kb on - strand, within CA264_09850at 2291.757 kb on + strand, within CA264_09850at 2291.759 kb on + strand, within CA264_09850at 2291.760 kb on - strand, within CA264_09850at 2291.760 kb on - strand, within CA264_09850at 2291.791 kb on - strand, within CA264_09850at 2291.795 kb on - strand, within CA264_09850at 2291.816 kb on - strand, within CA264_09850at 2291.816 kb on - strand, within CA264_09850at 2291.816 kb on - strand, within CA264_09850at 2291.819 kb on + strand, within CA264_09850at 2291.820 kb on - strand, within CA264_09850at 2291.849 kb on + strand, within CA264_09850at 2291.850 kb on - strand, within CA264_09850at 2291.885 kb on + strand, within CA264_09850at 2291.886 kb on - strand, within CA264_09850at 2291.886 kb on - strand, within CA264_09850at 2291.896 kb on + strand, within CA264_09850at 2291.935 kb on + strand, within CA264_09850at 2291.935 kb on + strand, within CA264_09850at 2291.935 kb on + strand, within CA264_09850at 2291.936 kb on - strand, within CA264_09850at 2291.936 kb on - strand, within CA264_09850at 2291.936 kb on - strand, within CA264_09850at 2291.943 kb on + strand, within CA264_09850at 2291.948 kb on - strand, within CA264_09850at 2291.962 kb on + strand, within CA264_09850at 2291.967 kb on + strand, within CA264_09850at 2291.968 kb on - strand, within CA264_09850at 2291.970 kb on + strand, within CA264_09850at 2291.971 kb on - strand, within CA264_09850at 2291.991 kb on - strand, within CA264_09850at 2292.004 kb on + strand, within CA264_09850at 2292.004 kb on + strand, within CA264_09850at 2292.005 kb on - strand, within CA264_09850at 2292.005 kb on - strand, within CA264_09850at 2292.025 kb on + strand, within CA264_09850at 2292.034 kb on + strand, within CA264_09850at 2292.057 kb on + strand, within CA264_09850at 2292.058 kb on - strand, within CA264_09850at 2292.143 kb on + strand, within CA264_09850at 2292.143 kb on + strand, within CA264_09850at 2292.194 kb on + strandat 2292.285 kb on + strandat 2292.285 kb on + strandat 2292.285 kb on + strandat 2292.286 kb on - strandat 2292.286 kb on - strandat 2292.286 kb on - strandat 2292.286 kb on - strandat 2292.286 kb on - strandat 2292.333 kb on + strandat 2292.334 kb on - strandat 2292.334 kb on - strandat 2292.334 kb on - strandat 2292.363 kb on - strandat 2292.376 kb on - strandat 2292.449 kb on - strand, within CA264_09855at 2292.489 kb on - strand, within CA264_09855at 2292.537 kb on + strand, within CA264_09855at 2292.537 kb on + strand, within CA264_09855at 2292.559 kb on - strand, within CA264_09855at 2292.568 kb on + strand, within CA264_09855at 2292.569 kb on - strand, within CA264_09855at 2292.576 kb on + strand, within CA264_09855at 2292.576 kb on + strand, within CA264_09855at 2292.587 kb on - strand, within CA264_09855at 2292.606 kb on - strand, within CA264_09855at 2292.611 kb on + strand, within CA264_09855at 2292.611 kb on + strand, within CA264_09855at 2292.612 kb on - strand, within CA264_09855at 2292.617 kb on + strand, within CA264_09855at 2292.617 kb on + strand, within CA264_09855at 2292.618 kb on - strand, within CA264_09855at 2292.618 kb on - strand, within CA264_09855at 2292.620 kb on + strand, within CA264_09855at 2292.646 kb on - strand, within CA264_09855at 2292.725 kb on - strand, within CA264_09855at 2292.766 kb on + strand, within CA264_09855at 2292.816 kb on - strand, within CA264_09855at 2292.829 kb on + strand, within CA264_09855at 2292.829 kb on + strand, within CA264_09855at 2292.830 kb on - strand, within CA264_09855at 2292.836 kb on + strand, within CA264_09855at 2292.836 kb on + strand, within CA264_09855at 2292.837 kb on - strand, within CA264_09855at 2292.839 kb on + strand, within CA264_09855at 2292.839 kb on + strand, within CA264_09855at 2292.839 kb on + strand, within CA264_09855at 2292.840 kb on - strand, within CA264_09855at 2292.840 kb on - strand, within CA264_09855at 2292.902 kb on - strand, within CA264_09855at 2292.999 kb on - strand, within CA264_09855at 2293.016 kb on - strand, within CA264_09855at 2293.042 kb on - strand, within CA264_09855at 2293.096 kb on + strand, within CA264_09855at 2293.102 kb on + strand, within CA264_09855at 2293.103 kb on - strand, within CA264_09855at 2293.115 kb on + strand, within CA264_09855at 2293.116 kb on - strand, within CA264_09855at 2293.116 kb on - strand, within CA264_09855at 2293.116 kb on - strand, within CA264_09855at 2293.116 kb on - strand, within CA264_09855at 2293.116 kb on - strand, within CA264_09855at 2293.161 kb on - strand, within CA264_09855at 2293.161 kb on - strand, within CA264_09855at 2293.221 kb on + strand, within CA264_09855at 2293.247 kb on - strand, within CA264_09855at 2293.248 kb on + strand, within CA264_09855at 2293.257 kb on + strand, within CA264_09855at 2293.272 kb on - strand, within CA264_09855at 2293.284 kb on - strand, within CA264_09855at 2293.284 kb on - strand, within CA264_09855at 2293.287 kb on + strand, within CA264_09855

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol%
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2,290,140 - -0.2
2,290,143 + +0.4
2,290,265 + +0.0
2,290,266 - -0.7
2,290,266 - -0.3
2,290,314 + CA264_09845 0.14 -1.6
2,290,315 - CA264_09845 0.14 -0.1
2,290,315 - CA264_09845 0.14 -0.4
2,290,344 + CA264_09845 0.17 +0.1
2,290,345 - CA264_09845 0.18 +0.2
2,290,345 - CA264_09845 0.18 -0.7
2,290,397 + CA264_09845 0.23 -0.0
2,290,553 + CA264_09845 0.40 +0.2
2,290,553 + CA264_09845 0.40 -0.4
2,290,553 + CA264_09845 0.40 +0.2
2,290,553 + CA264_09845 0.40 -0.5
2,290,553 + CA264_09845 0.40 -0.4
2,290,554 - CA264_09845 0.40 -0.2
2,290,554 - CA264_09845 0.40 +0.1
2,290,557 + CA264_09845 0.41 -0.4
2,290,557 + CA264_09845 0.41 -0.4
2,290,558 - CA264_09845 0.41 +0.2
2,290,607 + CA264_09845 0.46 -0.3
2,290,608 - CA264_09845 0.46 -1.0
2,290,714 + CA264_09845 0.58 -0.6
2,290,751 + CA264_09845 0.62 -1.3
2,290,787 + CA264_09845 0.66 -0.1
2,290,807 - CA264_09845 0.68 -0.1
2,290,826 - CA264_09845 0.70 -0.4
2,290,863 - CA264_09845 0.74 -0.5
2,290,889 + CA264_09845 0.77 -0.1
2,290,890 - CA264_09845 0.77 -0.3
2,290,890 - CA264_09845 0.77 -0.3
2,290,960 - CA264_09845 0.85 +0.2
2,290,997 + CA264_09845 0.89 -0.3
2,291,081 + +0.3
2,291,295 - CA264_09850 0.15 +1.5
2,291,295 - CA264_09850 0.15 -0.3
2,291,359 + CA264_09850 0.21 +0.2
2,291,380 + CA264_09850 0.23 -0.2
2,291,391 + CA264_09850 0.24 -0.8
2,291,392 - CA264_09850 0.24 -0.6
2,291,392 - CA264_09850 0.24 +1.8
2,291,392 - CA264_09850 0.24 +0.3
2,291,412 + CA264_09850 0.25 -0.2
2,291,413 - CA264_09850 0.25 -0.5
2,291,413 - CA264_09850 0.25 +0.1
2,291,482 - CA264_09850 0.31 -0.0
2,291,482 - CA264_09850 0.31 -0.2
2,291,482 - CA264_09850 0.31 +0.9
2,291,574 + CA264_09850 0.39 -0.4
2,291,575 - CA264_09850 0.39 +0.1
2,291,583 - CA264_09850 0.40 +0.4
2,291,592 - CA264_09850 0.41 -0.9
2,291,635 + CA264_09850 0.44 -0.1
2,291,635 + CA264_09850 0.44 -0.2
2,291,646 - CA264_09850 0.45 +0.2
2,291,704 + CA264_09850 0.50 -0.3
2,291,723 + CA264_09850 0.52 +0.1
2,291,723 + CA264_09850 0.52 -0.3
2,291,724 - CA264_09850 0.52 -0.1
2,291,724 - CA264_09850 0.52 +0.2
2,291,757 + CA264_09850 0.54 -0.2
2,291,759 + CA264_09850 0.55 +0.0
2,291,760 - CA264_09850 0.55 -0.4
2,291,760 - CA264_09850 0.55 -0.3
2,291,791 - CA264_09850 0.57 -0.2
2,291,795 - CA264_09850 0.58 -0.7
2,291,816 - CA264_09850 0.59 -0.1
2,291,816 - CA264_09850 0.59 -0.5
2,291,816 - CA264_09850 0.59 +1.6
2,291,819 + CA264_09850 0.60 -0.2
2,291,820 - CA264_09850 0.60 +0.1
2,291,849 + CA264_09850 0.62 -0.4
2,291,850 - CA264_09850 0.62 -0.8
2,291,885 + CA264_09850 0.65 -0.1
2,291,886 - CA264_09850 0.65 -0.5
2,291,886 - CA264_09850 0.65 -0.6
2,291,896 + CA264_09850 0.66 +0.0
2,291,935 + CA264_09850 0.70 +1.9
2,291,935 + CA264_09850 0.70 +0.3
2,291,935 + CA264_09850 0.70 +0.6
2,291,936 - CA264_09850 0.70 +0.3
2,291,936 - CA264_09850 0.70 -1.1
2,291,936 - CA264_09850 0.70 +0.6
2,291,943 + CA264_09850 0.70 -2.1
2,291,948 - CA264_09850 0.71 -1.0
2,291,962 + CA264_09850 0.72 +0.2
2,291,967 + CA264_09850 0.72 -0.0
2,291,968 - CA264_09850 0.72 +0.4
2,291,970 + CA264_09850 0.73 -0.4
2,291,971 - CA264_09850 0.73 +0.1
2,291,991 - CA264_09850 0.74 +0.3
2,292,004 + CA264_09850 0.75 -0.8
2,292,004 + CA264_09850 0.75 +0.1
2,292,005 - CA264_09850 0.75 -0.1
2,292,005 - CA264_09850 0.75 +0.2
2,292,025 + CA264_09850 0.77 +0.7
2,292,034 + CA264_09850 0.78 -1.3
2,292,057 + CA264_09850 0.80 -0.3
2,292,058 - CA264_09850 0.80 -0.1
2,292,143 + CA264_09850 0.87 -0.1
2,292,143 + CA264_09850 0.87 -0.1
2,292,194 + -0.9
2,292,285 + +2.3
2,292,285 + +0.1
2,292,285 + -0.7
2,292,286 - +2.3
2,292,286 - +0.0
2,292,286 - -1.7
2,292,286 - +0.4
2,292,286 - -0.4
2,292,333 + +0.1
2,292,334 - -1.7
2,292,334 - +0.1
2,292,334 - +0.0
2,292,363 - +1.3
2,292,376 - +0.5
2,292,449 - CA264_09855 0.13 -0.2
2,292,489 - CA264_09855 0.17 -0.4
2,292,537 + CA264_09855 0.21 -0.3
2,292,537 + CA264_09855 0.21 -0.4
2,292,559 - CA264_09855 0.22 +0.2
2,292,568 + CA264_09855 0.23 +0.4
2,292,569 - CA264_09855 0.23 -0.5
2,292,576 + CA264_09855 0.24 +0.5
2,292,576 + CA264_09855 0.24 +0.2
2,292,587 - CA264_09855 0.25 -0.2
2,292,606 - CA264_09855 0.26 +0.2
2,292,611 + CA264_09855 0.27 -0.4
2,292,611 + CA264_09855 0.27 +0.2
2,292,612 - CA264_09855 0.27 -0.5
2,292,617 + CA264_09855 0.27 +0.6
2,292,617 + CA264_09855 0.27 -1.0
2,292,618 - CA264_09855 0.27 -0.5
2,292,618 - CA264_09855 0.27 -1.1
2,292,620 + CA264_09855 0.27 +0.0
2,292,646 - CA264_09855 0.29 -0.4
2,292,725 - CA264_09855 0.36 -0.5
2,292,766 + CA264_09855 0.39 +0.2
2,292,816 - CA264_09855 0.43 -0.3
2,292,829 + CA264_09855 0.44 -0.7
2,292,829 + CA264_09855 0.44 -0.8
2,292,830 - CA264_09855 0.44 -0.6
2,292,836 + CA264_09855 0.45 -0.5
2,292,836 + CA264_09855 0.45 -0.1
2,292,837 - CA264_09855 0.45 -0.8
2,292,839 + CA264_09855 0.45 -0.0
2,292,839 + CA264_09855 0.45 +0.5
2,292,839 + CA264_09855 0.45 -0.7
2,292,840 - CA264_09855 0.45 +0.0
2,292,840 - CA264_09855 0.45 -0.5
2,292,902 - CA264_09855 0.50 -0.8
2,292,999 - CA264_09855 0.58 -0.1
2,293,016 - CA264_09855 0.59 -0.8
2,293,042 - CA264_09855 0.61 +0.2
2,293,096 + CA264_09855 0.66 -0.2
2,293,102 + CA264_09855 0.66 +1.0
2,293,103 - CA264_09855 0.66 -0.3
2,293,115 + CA264_09855 0.67 -1.0
2,293,116 - CA264_09855 0.67 -1.5
2,293,116 - CA264_09855 0.67 +0.2
2,293,116 - CA264_09855 0.67 +0.1
2,293,116 - CA264_09855 0.67 -0.1
2,293,116 - CA264_09855 0.67 -0.1
2,293,161 - CA264_09855 0.71 -0.8
2,293,161 - CA264_09855 0.71 -1.3
2,293,221 + CA264_09855 0.76 -0.2
2,293,247 - CA264_09855 0.78 -0.7
2,293,248 + CA264_09855 0.78 +0.6
2,293,257 + CA264_09855 0.79 -0.1
2,293,272 - CA264_09855 0.80 -1.8
2,293,284 - CA264_09855 0.81 +0.4
2,293,284 - CA264_09855 0.81 -0.3
2,293,287 + CA264_09855 0.81 -0.1

Or see this region's nucleotide sequence