Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09220 and CA264_09225 are separated by 201 nucleotides CA264_09225 and CA264_09230 are separated by 3 nucleotides CA264_09230 and CA264_09235 are separated by 158 nucleotides
CA264_09220: CA264_09220 - ferredoxin, at 2,158,590 to 2,158,913
_09220
CA264_09225: CA264_09225 - Fe-S oxidoreductase, at 2,159,115 to 2,159,855
_09225
CA264_09230: CA264_09230 - hydroxymethylglutaryl-CoA lyase, at 2,159,859 to 2,160,704
_09230
CA264_09235: CA264_09235 - short-chain dehydrogenase, at 2,160,863 to 2,161,717
_09235
Position (kb)
2159
2160
2161 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2158.899 kb on - strand at 2159.020 kb on + strand at 2159.021 kb on - strand at 2159.024 kb on - strand at 2159.060 kb on + strand at 2159.061 kb on - strand at 2159.084 kb on + strand at 2159.084 kb on + strand at 2159.110 kb on + strand at 2159.110 kb on + strand at 2159.111 kb on - strand at 2159.113 kb on - strand at 2159.113 kb on - strand at 2159.113 kb on - strand at 2159.113 kb on - strand at 2159.182 kb on + strand at 2159.228 kb on - strand, within CA264_09225 at 2159.256 kb on + strand, within CA264_09225 at 2159.274 kb on - strand, within CA264_09225 at 2159.285 kb on + strand, within CA264_09225 at 2159.286 kb on - strand, within CA264_09225 at 2159.286 kb on - strand, within CA264_09225 at 2159.286 kb on - strand, within CA264_09225 at 2159.310 kb on - strand, within CA264_09225 at 2159.310 kb on - strand, within CA264_09225 at 2159.376 kb on + strand, within CA264_09225 at 2159.377 kb on - strand, within CA264_09225 at 2159.438 kb on - strand, within CA264_09225 at 2159.444 kb on - strand, within CA264_09225 at 2159.477 kb on + strand, within CA264_09225 at 2159.478 kb on - strand, within CA264_09225 at 2159.578 kb on + strand, within CA264_09225 at 2159.626 kb on + strand, within CA264_09225 at 2159.664 kb on - strand, within CA264_09225 at 2159.739 kb on - strand, within CA264_09225 at 2159.740 kb on + strand, within CA264_09225 at 2159.831 kb on + strand at 2159.839 kb on - strand at 2159.855 kb on + strand at 2159.855 kb on + strand at 2159.856 kb on - strand at 2159.863 kb on - strand at 2159.925 kb on + strand at 2160.093 kb on - strand, within CA264_09230 at 2160.093 kb on - strand, within CA264_09230 at 2160.271 kb on + strand, within CA264_09230 at 2160.298 kb on + strand, within CA264_09230 at 2160.298 kb on + strand, within CA264_09230 at 2160.298 kb on + strand, within CA264_09230 at 2160.299 kb on - strand, within CA264_09230 at 2160.302 kb on + strand, within CA264_09230 at 2160.627 kb on - strand at 2160.647 kb on + strand at 2160.651 kb on + strand at 2160.654 kb on - strand at 2160.812 kb on - strand at 2160.819 kb on - strand at 2160.823 kb on + strand at 2160.835 kb on + strand at 2160.835 kb on + strand at 2160.836 kb on - strand at 2160.837 kb on + strand at 2160.845 kb on + strand at 2160.873 kb on + strand at 2160.967 kb on + strand, within CA264_09235 at 2160.980 kb on - strand, within CA264_09235 at 2161.039 kb on + strand, within CA264_09235 at 2161.039 kb on + strand, within CA264_09235 at 2161.039 kb on + strand, within CA264_09235 at 2161.040 kb on - strand, within CA264_09235 at 2161.040 kb on - strand, within CA264_09235 at 2161.040 kb on - strand, within CA264_09235 at 2161.043 kb on + strand, within CA264_09235 at 2161.044 kb on - strand, within CA264_09235 at 2161.044 kb on - strand, within CA264_09235 at 2161.051 kb on - strand, within CA264_09235 at 2161.122 kb on + strand, within CA264_09235 at 2161.122 kb on + strand, within CA264_09235 at 2161.122 kb on + strand, within CA264_09235 at 2161.201 kb on + strand, within CA264_09235 at 2161.328 kb on + strand, within CA264_09235 at 2161.411 kb on - strand, within CA264_09235 at 2161.411 kb on - strand, within CA264_09235 at 2161.431 kb on - strand, within CA264_09235 at 2161.435 kb on - strand, within CA264_09235 at 2161.593 kb on + strand, within CA264_09235 at 2161.620 kb on + strand, within CA264_09235 at 2161.620 kb on + strand, within CA264_09235 at 2161.621 kb on - strand, within CA264_09235 at 2161.621 kb on - strand, within CA264_09235 at 2161.638 kb on + strand at 2161.639 kb on - strand at 2161.640 kb on + strand at 2161.640 kb on + strand at 2161.640 kb on + strand at 2161.641 kb on - strand at 2161.641 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 2,158,899 - +0.7 2,159,020 + +0.6 2,159,021 - -0.8 2,159,024 - +0.2 2,159,060 + +0.8 2,159,061 - -0.3 2,159,084 + -0.9 2,159,084 + +0.1 2,159,110 + -1.1 2,159,110 + -2.6 2,159,111 - +0.4 2,159,113 - +0.9 2,159,113 - +0.4 2,159,113 - -0.5 2,159,113 - +0.2 2,159,182 + -1.0 2,159,228 - CA264_09225 0.15 -3.2 2,159,256 + CA264_09225 0.19 -0.9 2,159,274 - CA264_09225 0.21 +0.3 2,159,285 + CA264_09225 0.23 -1.3 2,159,286 - CA264_09225 0.23 -1.5 2,159,286 - CA264_09225 0.23 -2.6 2,159,286 - CA264_09225 0.23 -1.3 2,159,310 - CA264_09225 0.26 -1.4 2,159,310 - CA264_09225 0.26 -2.3 2,159,376 + CA264_09225 0.35 -2.8 2,159,377 - CA264_09225 0.35 -1.4 2,159,438 - CA264_09225 0.44 -2.5 2,159,444 - CA264_09225 0.44 -3.4 2,159,477 + CA264_09225 0.49 +0.2 2,159,478 - CA264_09225 0.49 -1.2 2,159,578 + CA264_09225 0.62 -2.7 2,159,626 + CA264_09225 0.69 -1.0 2,159,664 - CA264_09225 0.74 -2.3 2,159,739 - CA264_09225 0.84 +1.1 2,159,740 + CA264_09225 0.84 -1.1 2,159,831 + -1.3 2,159,839 - -1.9 2,159,855 + +0.1 2,159,855 + -1.4 2,159,856 - -1.4 2,159,863 - -0.5 2,159,925 + -0.7 2,160,093 - CA264_09230 0.28 -1.0 2,160,093 - CA264_09230 0.28 -2.6 2,160,271 + CA264_09230 0.49 -0.9 2,160,298 + CA264_09230 0.52 -1.9 2,160,298 + CA264_09230 0.52 -0.2 2,160,298 + CA264_09230 0.52 -0.7 2,160,299 - CA264_09230 0.52 +0.5 2,160,302 + CA264_09230 0.52 -0.0 2,160,627 - -0.6 2,160,647 + -1.7 2,160,651 + -0.0 2,160,654 - -1.0 2,160,812 - +0.8 2,160,819 - -1.0 2,160,823 + -0.4 2,160,835 + +0.0 2,160,835 + -0.2 2,160,836 - +0.5 2,160,837 + -1.9 2,160,845 + -0.4 2,160,873 + -1.5 2,160,967 + CA264_09235 0.12 -0.6 2,160,980 - CA264_09235 0.14 -0.8 2,161,039 + CA264_09235 0.21 +0.1 2,161,039 + CA264_09235 0.21 +1.0 2,161,039 + CA264_09235 0.21 -1.1 2,161,040 - CA264_09235 0.21 +0.3 2,161,040 - CA264_09235 0.21 -1.9 2,161,040 - CA264_09235 0.21 -0.5 2,161,043 + CA264_09235 0.21 -1.3 2,161,044 - CA264_09235 0.21 -0.4 2,161,044 - CA264_09235 0.21 -0.7 2,161,051 - CA264_09235 0.22 -0.9 2,161,122 + CA264_09235 0.30 -0.6 2,161,122 + CA264_09235 0.30 -1.1 2,161,122 + CA264_09235 0.30 +0.1 2,161,201 + CA264_09235 0.40 -1.6 2,161,328 + CA264_09235 0.54 -0.8 2,161,411 - CA264_09235 0.64 -1.1 2,161,411 - CA264_09235 0.64 -0.7 2,161,431 - CA264_09235 0.66 -0.8 2,161,435 - CA264_09235 0.67 -1.0 2,161,593 + CA264_09235 0.85 -0.8 2,161,620 + CA264_09235 0.89 -0.5 2,161,620 + CA264_09235 0.89 -0.5 2,161,621 - CA264_09235 0.89 -1.8 2,161,621 - CA264_09235 0.89 +0.7 2,161,638 + -0.3 2,161,639 - -0.6 2,161,640 + -1.2 2,161,640 + -1.0 2,161,640 + -0.5 2,161,641 - -0.2 2,161,641 - -0.5
Or see this region's nucleotide sequence