Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_09025

Experiment: m.b. Dimethyl Sulfoxide 10 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_09020 and CA264_09025 are separated by 95 nucleotidesCA264_09025 and CA264_09030 are separated by 758 nucleotides CA264_09020: CA264_09020 - alpha/beta hydrolase, at 2,106,322 to 2,107,107 _09020 CA264_09025: CA264_09025 - peptidase M28, at 2,107,203 to 2,108,855 _09025 CA264_09030: CA264_09030 - glycoside hydrolase family 31, at 2,109,614 to 2,112,085 _09030 Position (kb) 2107 2108 2109Strain fitness (log2 ratio) -2 -1 0 1 2at 2106.275 kb on + strandat 2106.275 kb on + strandat 2106.299 kb on + strandat 2106.300 kb on - strandat 2106.355 kb on + strandat 2106.355 kb on + strandat 2106.355 kb on + strandat 2106.402 kb on + strand, within CA264_09020at 2106.423 kb on - strand, within CA264_09020at 2106.428 kb on + strand, within CA264_09020at 2106.429 kb on - strand, within CA264_09020at 2106.432 kb on - strand, within CA264_09020at 2106.432 kb on - strand, within CA264_09020at 2106.432 kb on - strand, within CA264_09020at 2106.432 kb on - strand, within CA264_09020at 2106.464 kb on + strand, within CA264_09020at 2106.470 kb on - strand, within CA264_09020at 2106.499 kb on - strand, within CA264_09020at 2106.509 kb on - strand, within CA264_09020at 2106.514 kb on - strand, within CA264_09020at 2106.523 kb on - strand, within CA264_09020at 2106.540 kb on - strand, within CA264_09020at 2106.549 kb on - strand, within CA264_09020at 2106.549 kb on - strand, within CA264_09020at 2106.630 kb on - strand, within CA264_09020at 2106.728 kb on - strand, within CA264_09020at 2106.732 kb on + strand, within CA264_09020at 2106.733 kb on - strand, within CA264_09020at 2106.760 kb on - strand, within CA264_09020at 2106.762 kb on - strand, within CA264_09020at 2106.793 kb on + strand, within CA264_09020at 2106.794 kb on - strand, within CA264_09020at 2106.871 kb on + strand, within CA264_09020at 2106.926 kb on + strand, within CA264_09020at 2106.927 kb on - strand, within CA264_09020at 2106.950 kb on + strand, within CA264_09020at 2106.951 kb on - strand, within CA264_09020at 2107.002 kb on + strand, within CA264_09020at 2107.002 kb on + strand, within CA264_09020at 2107.002 kb on + strand, within CA264_09020at 2107.003 kb on - strand, within CA264_09020at 2107.003 kb on - strand, within CA264_09020at 2107.016 kb on + strand, within CA264_09020at 2107.023 kb on - strand, within CA264_09020at 2107.046 kb on + strandat 2107.046 kb on + strandat 2107.121 kb on - strandat 2107.122 kb on + strandat 2107.126 kb on + strandat 2107.126 kb on + strandat 2107.152 kb on - strandat 2107.163 kb on - strandat 2107.184 kb on + strandat 2107.216 kb on + strandat 2107.216 kb on + strandat 2107.229 kb on + strandat 2107.230 kb on - strandat 2107.230 kb on - strandat 2107.280 kb on - strandat 2107.328 kb on - strandat 2107.328 kb on - strandat 2107.344 kb on + strandat 2107.410 kb on + strand, within CA264_09025at 2107.410 kb on + strand, within CA264_09025at 2107.410 kb on + strand, within CA264_09025at 2107.410 kb on + strand, within CA264_09025at 2107.410 kb on + strand, within CA264_09025at 2107.502 kb on + strand, within CA264_09025at 2107.515 kb on - strand, within CA264_09025at 2107.515 kb on - strand, within CA264_09025at 2107.579 kb on + strand, within CA264_09025at 2107.579 kb on + strand, within CA264_09025at 2107.580 kb on - strand, within CA264_09025at 2107.606 kb on + strand, within CA264_09025at 2107.606 kb on + strand, within CA264_09025at 2107.669 kb on - strand, within CA264_09025at 2107.677 kb on + strand, within CA264_09025at 2107.677 kb on + strand, within CA264_09025at 2107.678 kb on - strand, within CA264_09025at 2107.678 kb on - strand, within CA264_09025at 2107.678 kb on - strand, within CA264_09025at 2107.682 kb on + strand, within CA264_09025at 2107.682 kb on + strand, within CA264_09025at 2107.683 kb on - strand, within CA264_09025at 2107.683 kb on - strand, within CA264_09025at 2107.683 kb on - strand, within CA264_09025at 2107.687 kb on + strand, within CA264_09025at 2107.687 kb on + strand, within CA264_09025at 2107.688 kb on - strand, within CA264_09025at 2107.700 kb on + strand, within CA264_09025at 2107.711 kb on + strand, within CA264_09025at 2107.715 kb on + strand, within CA264_09025at 2107.716 kb on - strand, within CA264_09025at 2107.716 kb on - strand, within CA264_09025at 2107.751 kb on - strand, within CA264_09025at 2107.758 kb on + strand, within CA264_09025at 2107.758 kb on + strand, within CA264_09025at 2107.758 kb on + strand, within CA264_09025at 2107.787 kb on + strand, within CA264_09025at 2107.826 kb on + strand, within CA264_09025at 2107.829 kb on + strand, within CA264_09025at 2107.879 kb on + strand, within CA264_09025at 2107.882 kb on + strand, within CA264_09025at 2107.882 kb on + strand, within CA264_09025at 2107.883 kb on - strand, within CA264_09025at 2107.883 kb on - strand, within CA264_09025at 2107.917 kb on + strand, within CA264_09025at 2107.931 kb on + strand, within CA264_09025at 2107.931 kb on + strand, within CA264_09025at 2107.931 kb on + strand, within CA264_09025at 2107.932 kb on - strand, within CA264_09025at 2107.932 kb on - strand, within CA264_09025at 2108.070 kb on + strand, within CA264_09025at 2108.076 kb on - strand, within CA264_09025at 2108.100 kb on + strand, within CA264_09025at 2108.101 kb on - strand, within CA264_09025at 2108.152 kb on - strand, within CA264_09025at 2108.152 kb on - strand, within CA264_09025at 2108.158 kb on + strand, within CA264_09025at 2108.163 kb on - strand, within CA264_09025at 2108.213 kb on + strand, within CA264_09025at 2108.213 kb on + strand, within CA264_09025at 2108.217 kb on + strand, within CA264_09025at 2108.275 kb on + strand, within CA264_09025at 2108.275 kb on + strand, within CA264_09025at 2108.276 kb on - strand, within CA264_09025at 2108.277 kb on + strand, within CA264_09025at 2108.278 kb on - strand, within CA264_09025at 2108.283 kb on - strand, within CA264_09025at 2108.320 kb on + strand, within CA264_09025at 2108.362 kb on - strand, within CA264_09025at 2108.373 kb on + strand, within CA264_09025at 2108.374 kb on - strand, within CA264_09025at 2108.384 kb on - strand, within CA264_09025at 2108.420 kb on + strand, within CA264_09025at 2108.421 kb on - strand, within CA264_09025at 2108.453 kb on - strand, within CA264_09025at 2108.462 kb on - strand, within CA264_09025at 2108.483 kb on - strand, within CA264_09025at 2108.483 kb on - strand, within CA264_09025at 2108.516 kb on - strand, within CA264_09025at 2108.516 kb on - strand, within CA264_09025at 2108.516 kb on - strand, within CA264_09025at 2108.619 kb on + strand, within CA264_09025at 2108.748 kb on + strandat 2108.779 kb on + strandat 2108.779 kb on + strandat 2108.779 kb on + strandat 2108.949 kb on + strandat 2108.953 kb on + strandat 2108.999 kb on + strandat 2109.000 kb on - strandat 2109.040 kb on - strandat 2109.040 kb on - strandat 2109.057 kb on + strandat 2109.057 kb on + strandat 2109.057 kb on + strandat 2109.058 kb on - strandat 2109.058 kb on - strandat 2109.058 kb on - strandat 2109.059 kb on + strandat 2109.059 kb on + strandat 2109.060 kb on - strandat 2109.060 kb on - strandat 2109.060 kb on - strandat 2109.060 kb on - strandat 2109.074 kb on + strandat 2109.074 kb on + strandat 2109.075 kb on - strandat 2109.132 kb on + strandat 2109.132 kb on + strandat 2109.133 kb on - strandat 2109.142 kb on + strandat 2109.143 kb on - strandat 2109.143 kb on - strandat 2109.174 kb on - strandat 2109.174 kb on - strandat 2109.175 kb on + strandat 2109.175 kb on + strandat 2109.176 kb on - strandat 2109.176 kb on - strandat 2109.183 kb on - strandat 2109.377 kb on - strandat 2109.380 kb on + strandat 2109.381 kb on - strandat 2109.396 kb on + strandat 2109.398 kb on + strandat 2109.412 kb on + strandat 2109.413 kb on - strandat 2109.419 kb on - strandat 2109.477 kb on + strandat 2109.480 kb on - strandat 2109.483 kb on + strandat 2109.483 kb on + strandat 2109.497 kb on + strandat 2109.497 kb on + strandat 2109.498 kb on - strandat 2109.518 kb on - strandat 2109.552 kb on - strandat 2109.552 kb on - strandat 2109.552 kb on - strandat 2109.553 kb on + strandat 2109.599 kb on - strandat 2109.622 kb on + strandat 2109.622 kb on + strandat 2109.622 kb on + strandat 2109.622 kb on + strandat 2109.622 kb on + strandat 2109.623 kb on - strandat 2109.623 kb on - strandat 2109.623 kb on - strandat 2109.673 kb on - strandat 2109.815 kb on + strandat 2109.816 kb on - strandat 2109.816 kb on - strandat 2109.823 kb on + strandat 2109.824 kb on - strandat 2109.837 kb on + strandat 2109.838 kb on - strandat 2109.838 kb on - strandat 2109.838 kb on - strandat 2109.842 kb on - strandat 2109.842 kb on - strandat 2109.848 kb on + strandat 2109.848 kb on + strandat 2109.849 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol%
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2,106,275 + -0.1
2,106,275 + -0.2
2,106,299 + +0.0
2,106,300 - -0.3
2,106,355 + -0.1
2,106,355 + +0.5
2,106,355 + -0.3
2,106,402 + CA264_09020 0.10 -0.4
2,106,423 - CA264_09020 0.13 -0.1
2,106,428 + CA264_09020 0.13 -1.6
2,106,429 - CA264_09020 0.14 +1.3
2,106,432 - CA264_09020 0.14 +0.8
2,106,432 - CA264_09020 0.14 +0.4
2,106,432 - CA264_09020 0.14 -0.3
2,106,432 - CA264_09020 0.14 -0.4
2,106,464 + CA264_09020 0.18 -0.2
2,106,470 - CA264_09020 0.19 -0.1
2,106,499 - CA264_09020 0.23 +0.2
2,106,509 - CA264_09020 0.24 -0.6
2,106,514 - CA264_09020 0.24 -0.1
2,106,523 - CA264_09020 0.26 -0.1
2,106,540 - CA264_09020 0.28 -1.1
2,106,549 - CA264_09020 0.29 +0.4
2,106,549 - CA264_09020 0.29 -0.3
2,106,630 - CA264_09020 0.39 -0.5
2,106,728 - CA264_09020 0.52 -0.2
2,106,732 + CA264_09020 0.52 -0.8
2,106,733 - CA264_09020 0.52 -0.1
2,106,760 - CA264_09020 0.56 -2.0
2,106,762 - CA264_09020 0.56 -1.2
2,106,793 + CA264_09020 0.60 +0.3
2,106,794 - CA264_09020 0.60 -0.1
2,106,871 + CA264_09020 0.70 -0.2
2,106,926 + CA264_09020 0.77 -1.1
2,106,927 - CA264_09020 0.77 +0.2
2,106,950 + CA264_09020 0.80 -0.5
2,106,951 - CA264_09020 0.80 -1.4
2,107,002 + CA264_09020 0.87 +0.1
2,107,002 + CA264_09020 0.87 -0.7
2,107,002 + CA264_09020 0.87 -1.1
2,107,003 - CA264_09020 0.87 -0.8
2,107,003 - CA264_09020 0.87 -2.2
2,107,016 + CA264_09020 0.88 +1.0
2,107,023 - CA264_09020 0.89 +0.2
2,107,046 + +0.1
2,107,046 + +1.0
2,107,121 - -0.0
2,107,122 + -0.9
2,107,126 + +0.2
2,107,126 + +0.5
2,107,152 - +0.0
2,107,163 - +0.0
2,107,184 + +0.1
2,107,216 + +0.3
2,107,216 + -1.2
2,107,229 + -0.9
2,107,230 - -0.0
2,107,230 - -0.5
2,107,280 - -0.6
2,107,328 - -0.8
2,107,328 - -0.0
2,107,344 + +1.0
2,107,410 + CA264_09025 0.13 +0.3
2,107,410 + CA264_09025 0.13 -0.8
2,107,410 + CA264_09025 0.13 -0.7
2,107,410 + CA264_09025 0.13 +0.0
2,107,410 + CA264_09025 0.13 +0.0
2,107,502 + CA264_09025 0.18 -0.6
2,107,515 - CA264_09025 0.19 +0.6
2,107,515 - CA264_09025 0.19 +0.6
2,107,579 + CA264_09025 0.23 +0.0
2,107,579 + CA264_09025 0.23 +0.0
2,107,580 - CA264_09025 0.23 +0.1
2,107,606 + CA264_09025 0.24 -0.8
2,107,606 + CA264_09025 0.24 -1.1
2,107,669 - CA264_09025 0.28 -0.3
2,107,677 + CA264_09025 0.29 +1.3
2,107,677 + CA264_09025 0.29 -0.2
2,107,678 - CA264_09025 0.29 -0.2
2,107,678 - CA264_09025 0.29 +1.1
2,107,678 - CA264_09025 0.29 +0.6
2,107,682 + CA264_09025 0.29 -1.0
2,107,682 + CA264_09025 0.29 -0.0
2,107,683 - CA264_09025 0.29 -0.1
2,107,683 - CA264_09025 0.29 -0.1
2,107,683 - CA264_09025 0.29 -0.1
2,107,687 + CA264_09025 0.29 -0.3
2,107,687 + CA264_09025 0.29 -0.4
2,107,688 - CA264_09025 0.29 -1.4
2,107,700 + CA264_09025 0.30 -0.3
2,107,711 + CA264_09025 0.31 -1.6
2,107,715 + CA264_09025 0.31 +1.3
2,107,716 - CA264_09025 0.31 -0.2
2,107,716 - CA264_09025 0.31 -0.1
2,107,751 - CA264_09025 0.33 +0.1
2,107,758 + CA264_09025 0.34 +0.2
2,107,758 + CA264_09025 0.34 -0.9
2,107,758 + CA264_09025 0.34 +0.1
2,107,787 + CA264_09025 0.35 -0.2
2,107,826 + CA264_09025 0.38 +1.4
2,107,829 + CA264_09025 0.38 -0.6
2,107,879 + CA264_09025 0.41 +0.0
2,107,882 + CA264_09025 0.41 +0.4
2,107,882 + CA264_09025 0.41 -0.1
2,107,883 - CA264_09025 0.41 -2.3
2,107,883 - CA264_09025 0.41 +1.3
2,107,917 + CA264_09025 0.43 +0.4
2,107,931 + CA264_09025 0.44 -0.2
2,107,931 + CA264_09025 0.44 +0.2
2,107,931 + CA264_09025 0.44 -0.1
2,107,932 - CA264_09025 0.44 -0.7
2,107,932 - CA264_09025 0.44 -0.3
2,108,070 + CA264_09025 0.52 +0.4
2,108,076 - CA264_09025 0.53 -0.0
2,108,100 + CA264_09025 0.54 +0.2
2,108,101 - CA264_09025 0.54 -0.1
2,108,152 - CA264_09025 0.57 -0.7
2,108,152 - CA264_09025 0.57 -0.1
2,108,158 + CA264_09025 0.58 -0.2
2,108,163 - CA264_09025 0.58 -1.6
2,108,213 + CA264_09025 0.61 +0.6
2,108,213 + CA264_09025 0.61 -1.0
2,108,217 + CA264_09025 0.61 -0.1
2,108,275 + CA264_09025 0.65 -0.6
2,108,275 + CA264_09025 0.65 +0.0
2,108,276 - CA264_09025 0.65 +0.0
2,108,277 + CA264_09025 0.65 -0.4
2,108,278 - CA264_09025 0.65 +0.3
2,108,283 - CA264_09025 0.65 -0.2
2,108,320 + CA264_09025 0.68 -0.9
2,108,362 - CA264_09025 0.70 -0.6
2,108,373 + CA264_09025 0.71 +0.3
2,108,374 - CA264_09025 0.71 -0.4
2,108,384 - CA264_09025 0.71 -0.3
2,108,420 + CA264_09025 0.74 +0.0
2,108,421 - CA264_09025 0.74 -0.6
2,108,453 - CA264_09025 0.76 +0.1
2,108,462 - CA264_09025 0.76 -0.0
2,108,483 - CA264_09025 0.77 +0.2
2,108,483 - CA264_09025 0.77 -0.2
2,108,516 - CA264_09025 0.79 +0.4
2,108,516 - CA264_09025 0.79 -0.7
2,108,516 - CA264_09025 0.79 -0.5
2,108,619 + CA264_09025 0.86 +1.3
2,108,748 + -0.1
2,108,779 + +0.5
2,108,779 + +0.5
2,108,779 + -0.7
2,108,949 + +0.5
2,108,953 + -0.1
2,108,999 + -0.2
2,109,000 - +0.4
2,109,040 - +0.3
2,109,040 - +0.0
2,109,057 + -0.1
2,109,057 + +0.3
2,109,057 + +0.7
2,109,058 - +0.2
2,109,058 - -0.1
2,109,058 - +0.8
2,109,059 + -1.3
2,109,059 + +0.1
2,109,060 - -0.6
2,109,060 - +2.0
2,109,060 - +0.5
2,109,060 - -0.8
2,109,074 + +2.3
2,109,074 + +0.7
2,109,075 - -0.4
2,109,132 + -1.2
2,109,132 + -0.4
2,109,133 - +0.0
2,109,142 + -0.1
2,109,143 - -0.0
2,109,143 - -0.8
2,109,174 - +0.8
2,109,174 - -0.1
2,109,175 + +0.2
2,109,175 + +0.7
2,109,176 - +0.1
2,109,176 - +0.3
2,109,183 - +0.0
2,109,377 - -0.6
2,109,380 + -0.3
2,109,381 - -0.2
2,109,396 + +1.3
2,109,398 + -0.4
2,109,412 + -0.6
2,109,413 - -0.4
2,109,419 - -0.2
2,109,477 + +0.7
2,109,480 - -0.0
2,109,483 + +0.6
2,109,483 + +0.1
2,109,497 + +0.7
2,109,497 + -0.3
2,109,498 - +0.2
2,109,518 - -0.3
2,109,552 - -0.7
2,109,552 - -0.1
2,109,552 - -0.3
2,109,553 + +0.1
2,109,599 - -0.2
2,109,622 + -0.8
2,109,622 + +0.4
2,109,622 + +0.0
2,109,622 + -0.2
2,109,622 + +0.6
2,109,623 - -0.1
2,109,623 - +0.1
2,109,623 - +0.5
2,109,673 - -1.6
2,109,815 + +0.3
2,109,816 - -0.3
2,109,816 - +1.3
2,109,823 + -0.2
2,109,824 - -0.7
2,109,837 + -0.3
2,109,838 - +0.7
2,109,838 - +0.7
2,109,838 - +0.3
2,109,842 - +1.0
2,109,842 - +0.5
2,109,848 + -0.1
2,109,848 + -0.1
2,109,849 - +0.1

Or see this region's nucleotide sequence