Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07795 and CA264_07800 are separated by 173 nucleotides CA264_07800 and CA264_07805 are separated by 3 nucleotides
CA264_07795: CA264_07795 - ATP-dependent DNA helicase, at 1,804,607 to 1,806,844
_07795
CA264_07800: CA264_07800 - hypothetical protein, at 1,807,018 to 1,807,677
_07800
CA264_07805: CA264_07805 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 1,807,681 to 1,808,985
_07805
Position (kb)
1807
1808 Strain fitness (log2 ratio)
-2
-1
0
1 at 1806.834 kb on + strand at 1806.843 kb on - strand at 1806.854 kb on - strand at 1806.867 kb on + strand at 1806.875 kb on - strand at 1806.909 kb on + strand at 1806.910 kb on - strand at 1806.910 kb on - strand at 1806.958 kb on - strand at 1806.959 kb on + strand at 1806.960 kb on - strand at 1806.971 kb on - strand at 1807.026 kb on + strand at 1807.026 kb on + strand at 1807.026 kb on + strand at 1807.026 kb on + strand at 1807.027 kb on - strand at 1807.027 kb on - strand at 1807.038 kb on + strand at 1807.064 kb on - strand at 1807.093 kb on + strand, within CA264_07800 at 1807.093 kb on + strand, within CA264_07800 at 1807.093 kb on + strand, within CA264_07800 at 1807.095 kb on + strand, within CA264_07800 at 1807.283 kb on - strand, within CA264_07800 at 1807.283 kb on - strand, within CA264_07800 at 1807.336 kb on - strand, within CA264_07800 at 1807.448 kb on - strand, within CA264_07800 at 1807.473 kb on + strand, within CA264_07800 at 1807.540 kb on + strand, within CA264_07800 at 1807.540 kb on + strand, within CA264_07800 at 1807.541 kb on - strand, within CA264_07800
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 1,806,834 + -0.3 1,806,843 - -0.4 1,806,854 - -0.8 1,806,867 + -0.3 1,806,875 - -1.6 1,806,909 + -0.8 1,806,910 - -0.1 1,806,910 - -0.7 1,806,958 - -1.0 1,806,959 + -0.5 1,806,960 - +0.3 1,806,971 - +0.2 1,807,026 + -0.1 1,807,026 + -1.2 1,807,026 + -0.6 1,807,026 + -0.6 1,807,027 - -1.9 1,807,027 - -0.9 1,807,038 + +0.5 1,807,064 - -0.1 1,807,093 + CA264_07800 0.11 -0.8 1,807,093 + CA264_07800 0.11 +0.2 1,807,093 + CA264_07800 0.11 -0.7 1,807,095 + CA264_07800 0.12 -0.8 1,807,283 - CA264_07800 0.40 -0.2 1,807,283 - CA264_07800 0.40 -0.5 1,807,336 - CA264_07800 0.48 -0.8 1,807,448 - CA264_07800 0.65 -1.6 1,807,473 + CA264_07800 0.69 -0.9 1,807,540 + CA264_07800 0.79 -0.6 1,807,540 + CA264_07800 0.79 -1.3 1,807,541 - CA264_07800 0.79 -0.4
Or see this region's nucleotide sequence