Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07555 and CA264_07560 are separated by 77 nucleotides CA264_07560 and CA264_07565 are separated by 175 nucleotides CA264_07565 and CA264_07570 are separated by 82 nucleotides
CA264_07555: CA264_07555 - aqualysin 1, at 1,751,420 to 1,752,718
_07555
CA264_07560: CA264_07560 - DNA helicase RecQ, at 1,752,796 to 1,754,928
_07560
CA264_07565: CA264_07565 - four-helix bundle copper-binding protein, at 1,755,104 to 1,755,439
_07565
CA264_07570: CA264_07570 - hypothetical protein, at 1,755,522 to 1,755,854
_07570
Position (kb)
1752
1753
1754
1755 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1751.848 kb on + strand, within CA264_07555 at 1751.848 kb on + strand, within CA264_07555 at 1751.849 kb on - strand, within CA264_07555 at 1751.854 kb on + strand, within CA264_07555 at 1751.855 kb on - strand, within CA264_07555 at 1751.933 kb on + strand, within CA264_07555 at 1751.933 kb on + strand, within CA264_07555 at 1751.934 kb on - strand, within CA264_07555 at 1751.936 kb on - strand, within CA264_07555 at 1751.936 kb on - strand, within CA264_07555 at 1751.936 kb on - strand, within CA264_07555 at 1751.936 kb on - strand, within CA264_07555 at 1751.936 kb on - strand, within CA264_07555 at 1752.073 kb on - strand, within CA264_07555 at 1752.142 kb on - strand, within CA264_07555 at 1752.152 kb on - strand, within CA264_07555 at 1752.183 kb on + strand, within CA264_07555 at 1752.184 kb on - strand, within CA264_07555 at 1752.197 kb on - strand, within CA264_07555 at 1752.223 kb on - strand, within CA264_07555 at 1752.259 kb on + strand, within CA264_07555 at 1752.359 kb on - strand, within CA264_07555 at 1752.508 kb on + strand, within CA264_07555 at 1752.520 kb on - strand, within CA264_07555 at 1752.737 kb on - strand at 1752.780 kb on - strand at 1752.846 kb on - strand at 1752.848 kb on + strand at 1752.855 kb on - strand at 1752.855 kb on - strand at 1752.933 kb on + strand at 1752.933 kb on + strand at 1752.933 kb on + strand at 1752.933 kb on + strand at 1752.934 kb on - strand at 1752.934 kb on - strand at 1752.936 kb on - strand at 1752.953 kb on + strand at 1752.953 kb on + strand at 1752.954 kb on - strand at 1752.954 kb on - strand at 1752.986 kb on + strand at 1753.053 kb on + strand, within CA264_07560 at 1753.053 kb on + strand, within CA264_07560 at 1753.053 kb on + strand, within CA264_07560 at 1753.054 kb on - strand, within CA264_07560 at 1753.057 kb on + strand, within CA264_07560 at 1753.058 kb on - strand, within CA264_07560 at 1753.058 kb on - strand, within CA264_07560 at 1753.111 kb on - strand, within CA264_07560 at 1753.159 kb on - strand, within CA264_07560 at 1753.231 kb on - strand, within CA264_07560 at 1753.351 kb on + strand, within CA264_07560 at 1753.453 kb on - strand, within CA264_07560 at 1753.478 kb on + strand, within CA264_07560 at 1753.491 kb on - strand, within CA264_07560 at 1753.504 kb on - strand, within CA264_07560 at 1753.517 kb on - strand, within CA264_07560 at 1753.574 kb on + strand, within CA264_07560 at 1753.679 kb on - strand, within CA264_07560 at 1753.784 kb on + strand, within CA264_07560 at 1753.784 kb on + strand, within CA264_07560 at 1753.785 kb on - strand, within CA264_07560 at 1753.785 kb on - strand, within CA264_07560 at 1753.897 kb on - strand, within CA264_07560 at 1753.922 kb on + strand, within CA264_07560 at 1753.922 kb on + strand, within CA264_07560 at 1753.922 kb on + strand, within CA264_07560 at 1753.922 kb on + strand, within CA264_07560 at 1753.922 kb on + strand, within CA264_07560 at 1753.923 kb on - strand, within CA264_07560 at 1753.923 kb on - strand, within CA264_07560 at 1753.923 kb on - strand, within CA264_07560 at 1753.985 kb on + strand, within CA264_07560 at 1754.037 kb on + strand, within CA264_07560 at 1754.068 kb on - strand, within CA264_07560 at 1754.150 kb on + strand, within CA264_07560 at 1754.150 kb on + strand, within CA264_07560 at 1754.153 kb on + strand, within CA264_07560 at 1754.153 kb on + strand, within CA264_07560 at 1754.184 kb on + strand, within CA264_07560 at 1754.185 kb on - strand, within CA264_07560 at 1754.222 kb on + strand, within CA264_07560 at 1754.222 kb on + strand, within CA264_07560 at 1754.357 kb on + strand, within CA264_07560 at 1754.358 kb on - strand, within CA264_07560 at 1754.392 kb on - strand, within CA264_07560 at 1754.496 kb on + strand, within CA264_07560 at 1754.496 kb on + strand, within CA264_07560 at 1754.496 kb on + strand, within CA264_07560 at 1754.497 kb on - strand, within CA264_07560 at 1754.497 kb on - strand, within CA264_07560 at 1754.497 kb on - strand, within CA264_07560 at 1754.497 kb on - strand, within CA264_07560 at 1754.497 kb on - strand, within CA264_07560 at 1754.589 kb on - strand, within CA264_07560 at 1754.589 kb on - strand, within CA264_07560 at 1754.666 kb on + strand, within CA264_07560 at 1754.749 kb on - strand at 1754.778 kb on - strand at 1754.812 kb on + strand at 1754.891 kb on - strand at 1754.928 kb on + strand at 1754.928 kb on + strand at 1754.933 kb on - strand at 1754.933 kb on - strand at 1754.961 kb on + strand at 1754.962 kb on - strand at 1754.962 kb on - strand at 1754.996 kb on + strand at 1755.017 kb on + strand at 1755.018 kb on - strand at 1755.018 kb on - strand at 1755.048 kb on + strand at 1755.048 kb on + strand at 1755.048 kb on + strand at 1755.049 kb on - strand at 1755.049 kb on - strand at 1755.049 kb on - strand at 1755.049 kb on - strand at 1755.067 kb on - strand at 1755.082 kb on + strand at 1755.098 kb on - strand at 1755.223 kb on + strand, within CA264_07565 at 1755.249 kb on + strand, within CA264_07565 at 1755.357 kb on - strand, within CA264_07565 at 1755.357 kb on - strand, within CA264_07565 at 1755.443 kb on - strand at 1755.450 kb on - strand at 1755.451 kb on + strand at 1755.452 kb on - strand at 1755.458 kb on - strand at 1755.476 kb on + strand at 1755.537 kb on + strand at 1755.537 kb on + strand at 1755.750 kb on + strand, within CA264_07570 at 1755.750 kb on + strand, within CA264_07570 at 1755.750 kb on + strand, within CA264_07570 at 1755.779 kb on + strand, within CA264_07570 at 1755.779 kb on + strand, within CA264_07570 at 1755.780 kb on - strand, within CA264_07570 at 1755.799 kb on + strand, within CA264_07570 at 1755.799 kb on + strand, within CA264_07570 at 1755.845 kb on + strand at 1755.846 kb on - strand at 1755.873 kb on - strand at 1755.875 kb on - strand at 1755.876 kb on + strand at 1755.876 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 1,751,848 + CA264_07555 0.33 -0.6 1,751,848 + CA264_07555 0.33 +0.0 1,751,849 - CA264_07555 0.33 -0.5 1,751,854 + CA264_07555 0.33 -0.6 1,751,855 - CA264_07555 0.33 -0.1 1,751,933 + CA264_07555 0.39 -0.4 1,751,933 + CA264_07555 0.39 +0.1 1,751,934 - CA264_07555 0.40 -1.8 1,751,936 - CA264_07555 0.40 -0.5 1,751,936 - CA264_07555 0.40 -0.9 1,751,936 - CA264_07555 0.40 -0.3 1,751,936 - CA264_07555 0.40 -0.8 1,751,936 - CA264_07555 0.40 -0.9 1,752,073 - CA264_07555 0.50 -1.1 1,752,142 - CA264_07555 0.56 -0.3 1,752,152 - CA264_07555 0.56 -0.3 1,752,183 + CA264_07555 0.59 +0.3 1,752,184 - CA264_07555 0.59 -0.7 1,752,197 - CA264_07555 0.60 +0.6 1,752,223 - CA264_07555 0.62 -1.6 1,752,259 + CA264_07555 0.65 -0.8 1,752,359 - CA264_07555 0.72 -1.2 1,752,508 + CA264_07555 0.84 -0.8 1,752,520 - CA264_07555 0.85 +0.3 1,752,737 - -0.3 1,752,780 - +0.2 1,752,846 - +0.4 1,752,848 + -1.5 1,752,855 - -0.1 1,752,855 - -0.1 1,752,933 + -0.2 1,752,933 + -0.9 1,752,933 + -1.2 1,752,933 + -0.1 1,752,934 - -0.7 1,752,934 - -0.6 1,752,936 - -1.9 1,752,953 + +0.1 1,752,953 + -0.1 1,752,954 - +0.0 1,752,954 - -0.9 1,752,986 + -0.3 1,753,053 + CA264_07560 0.12 -1.7 1,753,053 + CA264_07560 0.12 +0.0 1,753,053 + CA264_07560 0.12 +1.5 1,753,054 - CA264_07560 0.12 -0.7 1,753,057 + CA264_07560 0.12 +0.4 1,753,058 - CA264_07560 0.12 +0.4 1,753,058 - CA264_07560 0.12 -0.2 1,753,111 - CA264_07560 0.15 -0.1 1,753,159 - CA264_07560 0.17 +0.5 1,753,231 - CA264_07560 0.20 -0.7 1,753,351 + CA264_07560 0.26 -2.0 1,753,453 - CA264_07560 0.31 -1.3 1,753,478 + CA264_07560 0.32 -1.2 1,753,491 - CA264_07560 0.33 -1.0 1,753,504 - CA264_07560 0.33 -1.1 1,753,517 - CA264_07560 0.34 -1.4 1,753,574 + CA264_07560 0.36 -1.0 1,753,679 - CA264_07560 0.41 -2.3 1,753,784 + CA264_07560 0.46 -1.9 1,753,784 + CA264_07560 0.46 -0.6 1,753,785 - CA264_07560 0.46 -1.2 1,753,785 - CA264_07560 0.46 -2.0 1,753,897 - CA264_07560 0.52 -0.7 1,753,922 + CA264_07560 0.53 -1.9 1,753,922 + CA264_07560 0.53 -2.5 1,753,922 + CA264_07560 0.53 -1.2 1,753,922 + CA264_07560 0.53 -1.2 1,753,922 + CA264_07560 0.53 +0.6 1,753,923 - CA264_07560 0.53 -0.5 1,753,923 - CA264_07560 0.53 -0.6 1,753,923 - CA264_07560 0.53 -0.3 1,753,985 + CA264_07560 0.56 -1.6 1,754,037 + CA264_07560 0.58 -1.4 1,754,068 - CA264_07560 0.60 +0.1 1,754,150 + CA264_07560 0.63 -1.1 1,754,150 + CA264_07560 0.63 -1.7 1,754,153 + CA264_07560 0.64 -1.6 1,754,153 + CA264_07560 0.64 -1.8 1,754,184 + CA264_07560 0.65 -0.8 1,754,185 - CA264_07560 0.65 -0.9 1,754,222 + CA264_07560 0.67 -0.6 1,754,222 + CA264_07560 0.67 -1.6 1,754,357 + CA264_07560 0.73 -1.1 1,754,358 - CA264_07560 0.73 -0.5 1,754,392 - CA264_07560 0.75 -3.0 1,754,496 + CA264_07560 0.80 -0.9 1,754,496 + CA264_07560 0.80 -0.9 1,754,496 + CA264_07560 0.80 -0.7 1,754,497 - CA264_07560 0.80 -1.3 1,754,497 - CA264_07560 0.80 -0.9 1,754,497 - CA264_07560 0.80 +0.2 1,754,497 - CA264_07560 0.80 -0.2 1,754,497 - CA264_07560 0.80 -1.5 1,754,589 - CA264_07560 0.84 -1.7 1,754,589 - CA264_07560 0.84 -1.8 1,754,666 + CA264_07560 0.88 -1.8 1,754,749 - -2.1 1,754,778 - -1.9 1,754,812 + -0.1 1,754,891 - -0.9 1,754,928 + +0.0 1,754,928 + -0.8 1,754,933 - -0.2 1,754,933 - -0.0 1,754,961 + +0.2 1,754,962 - -0.4 1,754,962 - +0.2 1,754,996 + +1.0 1,755,017 + -0.0 1,755,018 - -0.5 1,755,018 - +0.5 1,755,048 + -0.2 1,755,048 + -0.3 1,755,048 + +0.0 1,755,049 - +0.5 1,755,049 - +0.3 1,755,049 - +0.9 1,755,049 - -0.7 1,755,067 - +0.6 1,755,082 + +0.9 1,755,098 - -0.4 1,755,223 + CA264_07565 0.35 -1.6 1,755,249 + CA264_07565 0.43 -0.2 1,755,357 - CA264_07565 0.75 +0.4 1,755,357 - CA264_07565 0.75 +0.1 1,755,443 - -0.0 1,755,450 - -0.2 1,755,451 + +0.1 1,755,452 - -0.8 1,755,458 - -0.9 1,755,476 + -0.0 1,755,537 + -0.5 1,755,537 + -0.2 1,755,750 + CA264_07570 0.68 +1.4 1,755,750 + CA264_07570 0.68 +0.8 1,755,750 + CA264_07570 0.68 -0.7 1,755,779 + CA264_07570 0.77 -0.5 1,755,779 + CA264_07570 0.77 -0.9 1,755,780 - CA264_07570 0.77 +0.1 1,755,799 + CA264_07570 0.83 -0.6 1,755,799 + CA264_07570 0.83 -0.5 1,755,845 + +0.0 1,755,846 - -2.2 1,755,873 - +0.6 1,755,875 - +0.3 1,755,876 + -0.3 1,755,876 + -0.1
Or see this region's nucleotide sequence