Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05045 and CA264_05050 are separated by 30 nucleotides CA264_05050 and CA264_05055 are separated by 555 nucleotides CA264_05055 and CA264_05060 are separated by 1 nucleotides CA264_05060 and CA264_05065 are separated by 91 nucleotides
CA264_05045: CA264_05045 - hypothetical protein, at 1,169,983 to 1,170,393
_05045
CA264_05050: CA264_05050 - hypothetical protein, at 1,170,424 to 1,170,630
_05050
CA264_05055: CA264_05055 - anthranilate synthase component I, at 1,171,186 to 1,172,598
_05055
CA264_05060: CA264_05060 - glutamine amidotransferase, at 1,172,600 to 1,173,163
_05060
CA264_05065: CA264_05065 - anthranilate phosphoribosyltransferase, at 1,173,255 to 1,174,262
_05065
Position (kb)
1171
1172
1173 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1170.248 kb on - strand, within CA264_05045 at 1170.277 kb on + strand, within CA264_05045 at 1170.277 kb on + strand, within CA264_05045 at 1170.288 kb on - strand, within CA264_05045 at 1170.310 kb on - strand, within CA264_05045 at 1170.314 kb on + strand, within CA264_05045 at 1170.337 kb on - strand, within CA264_05045 at 1170.337 kb on - strand, within CA264_05045 at 1170.337 kb on - strand, within CA264_05045 at 1170.349 kb on + strand, within CA264_05045 at 1170.357 kb on + strand at 1170.357 kb on + strand at 1170.357 kb on + strand at 1170.358 kb on - strand at 1170.358 kb on - strand at 1170.367 kb on + strand at 1170.368 kb on - strand at 1170.400 kb on + strand at 1170.400 kb on + strand at 1170.401 kb on - strand at 1170.401 kb on - strand at 1170.401 kb on - strand at 1170.401 kb on - strand at 1170.484 kb on + strand, within CA264_05050 at 1170.569 kb on - strand, within CA264_05050 at 1170.596 kb on + strand, within CA264_05050 at 1170.597 kb on - strand, within CA264_05050 at 1170.599 kb on - strand, within CA264_05050 at 1170.700 kb on - strand at 1170.805 kb on - strand at 1170.952 kb on + strand at 1170.953 kb on - strand at 1170.990 kb on + strand at 1170.990 kb on + strand at 1170.999 kb on - strand at 1171.007 kb on - strand at 1171.034 kb on + strand at 1171.055 kb on - strand at 1171.082 kb on + strand at 1171.083 kb on - strand at 1171.198 kb on - strand at 1171.213 kb on + strand at 1171.214 kb on - strand at 1171.256 kb on - strand at 1171.362 kb on + strand, within CA264_05055 at 1171.531 kb on + strand, within CA264_05055 at 1171.540 kb on + strand, within CA264_05055 at 1171.540 kb on + strand, within CA264_05055 at 1171.558 kb on + strand, within CA264_05055 at 1171.559 kb on - strand, within CA264_05055 at 1171.559 kb on - strand, within CA264_05055 at 1171.610 kb on + strand, within CA264_05055 at 1171.611 kb on - strand, within CA264_05055 at 1171.611 kb on - strand, within CA264_05055 at 1171.611 kb on - strand, within CA264_05055 at 1171.612 kb on + strand, within CA264_05055 at 1171.613 kb on - strand, within CA264_05055 at 1171.615 kb on + strand, within CA264_05055 at 1171.616 kb on - strand, within CA264_05055 at 1171.624 kb on + strand, within CA264_05055 at 1171.635 kb on + strand, within CA264_05055 at 1171.636 kb on - strand, within CA264_05055 at 1171.666 kb on + strand, within CA264_05055 at 1171.667 kb on - strand, within CA264_05055 at 1171.669 kb on - strand, within CA264_05055 at 1171.669 kb on - strand, within CA264_05055 at 1171.684 kb on + strand, within CA264_05055 at 1171.755 kb on + strand, within CA264_05055 at 1171.818 kb on - strand, within CA264_05055 at 1171.909 kb on - strand, within CA264_05055 at 1171.933 kb on - strand, within CA264_05055 at 1171.948 kb on + strand, within CA264_05055 at 1171.949 kb on - strand, within CA264_05055 at 1171.957 kb on + strand, within CA264_05055 at 1171.967 kb on - strand, within CA264_05055 at 1171.977 kb on + strand, within CA264_05055 at 1172.477 kb on + strand at 1172.478 kb on - strand at 1172.478 kb on - strand at 1172.479 kb on + strand at 1172.480 kb on - strand at 1172.625 kb on - strand at 1172.626 kb on - strand at 1172.642 kb on - strand at 1172.679 kb on + strand, within CA264_05060 at 1172.759 kb on - strand, within CA264_05060 at 1172.802 kb on - strand, within CA264_05060 at 1172.835 kb on + strand, within CA264_05060 at 1172.859 kb on + strand, within CA264_05060 at 1172.860 kb on - strand, within CA264_05060 at 1173.050 kb on + strand, within CA264_05060 at 1173.053 kb on - strand, within CA264_05060 at 1173.162 kb on - strand at 1173.201 kb on + strand at 1173.234 kb on + strand at 1173.240 kb on + strand at 1173.241 kb on - strand at 1173.277 kb on + strand at 1173.468 kb on + strand, within CA264_05065 at 1173.469 kb on - strand, within CA264_05065 at 1173.471 kb on - strand, within CA264_05065 at 1173.513 kb on - strand, within CA264_05065 at 1173.524 kb on - strand, within CA264_05065 at 1173.524 kb on - strand, within CA264_05065 at 1173.528 kb on - strand, within CA264_05065 at 1173.528 kb on - strand, within CA264_05065 at 1173.532 kb on + strand, within CA264_05065 at 1173.563 kb on - strand, within CA264_05065 at 1173.585 kb on + strand, within CA264_05065
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 1,170,248 - CA264_05045 0.64 +0.1 1,170,277 + CA264_05045 0.72 +0.4 1,170,277 + CA264_05045 0.72 -0.6 1,170,288 - CA264_05045 0.74 -0.2 1,170,310 - CA264_05045 0.80 -1.0 1,170,314 + CA264_05045 0.81 +2.9 1,170,337 - CA264_05045 0.86 -0.0 1,170,337 - CA264_05045 0.86 +0.1 1,170,337 - CA264_05045 0.86 -0.6 1,170,349 + CA264_05045 0.89 +0.4 1,170,357 + +0.0 1,170,357 + -1.9 1,170,357 + -0.7 1,170,358 - +0.5 1,170,358 - +0.6 1,170,367 + +0.2 1,170,368 - +0.0 1,170,400 + -0.9 1,170,400 + +2.2 1,170,401 - +0.6 1,170,401 - +0.0 1,170,401 - +1.6 1,170,401 - +0.2 1,170,484 + CA264_05050 0.29 -0.3 1,170,569 - CA264_05050 0.70 -0.1 1,170,596 + CA264_05050 0.83 +0.4 1,170,597 - CA264_05050 0.84 -0.0 1,170,599 - CA264_05050 0.85 +0.4 1,170,700 - -0.5 1,170,805 - +0.5 1,170,952 + -0.4 1,170,953 - -0.3 1,170,990 + -0.2 1,170,990 + +0.2 1,170,999 - -0.2 1,171,007 - +0.7 1,171,034 + -0.2 1,171,055 - -0.6 1,171,082 + -0.6 1,171,083 - -0.2 1,171,198 - -0.5 1,171,213 + -0.0 1,171,214 - -0.2 1,171,256 - -0.9 1,171,362 + CA264_05055 0.12 -0.6 1,171,531 + CA264_05055 0.24 -1.5 1,171,540 + CA264_05055 0.25 +0.2 1,171,540 + CA264_05055 0.25 +0.0 1,171,558 + CA264_05055 0.26 -1.3 1,171,559 - CA264_05055 0.26 -0.7 1,171,559 - CA264_05055 0.26 -1.2 1,171,610 + CA264_05055 0.30 +0.5 1,171,611 - CA264_05055 0.30 -0.0 1,171,611 - CA264_05055 0.30 -0.4 1,171,611 - CA264_05055 0.30 -1.4 1,171,612 + CA264_05055 0.30 +1.3 1,171,613 - CA264_05055 0.30 -0.6 1,171,615 + CA264_05055 0.30 +0.3 1,171,616 - CA264_05055 0.30 -0.1 1,171,624 + CA264_05055 0.31 +0.5 1,171,635 + CA264_05055 0.32 -1.4 1,171,636 - CA264_05055 0.32 -0.1 1,171,666 + CA264_05055 0.34 -0.4 1,171,667 - CA264_05055 0.34 -1.7 1,171,669 - CA264_05055 0.34 -1.0 1,171,669 - CA264_05055 0.34 -0.1 1,171,684 + CA264_05055 0.35 -0.3 1,171,755 + CA264_05055 0.40 -0.4 1,171,818 - CA264_05055 0.45 +1.3 1,171,909 - CA264_05055 0.51 +0.6 1,171,933 - CA264_05055 0.53 -0.5 1,171,948 + CA264_05055 0.54 -0.5 1,171,949 - CA264_05055 0.54 +1.3 1,171,957 + CA264_05055 0.55 -0.1 1,171,967 - CA264_05055 0.55 -1.6 1,171,977 + CA264_05055 0.56 +0.1 1,172,477 + -1.3 1,172,478 - -0.8 1,172,478 - -0.5 1,172,479 + -1.4 1,172,480 - -1.2 1,172,625 - -0.4 1,172,626 - -2.3 1,172,642 - +0.1 1,172,679 + CA264_05060 0.14 -1.4 1,172,759 - CA264_05060 0.28 +0.4 1,172,802 - CA264_05060 0.36 -0.9 1,172,835 + CA264_05060 0.42 -0.8 1,172,859 + CA264_05060 0.46 -1.5 1,172,860 - CA264_05060 0.46 +0.5 1,173,050 + CA264_05060 0.80 -0.6 1,173,053 - CA264_05060 0.80 -0.5 1,173,162 - +1.5 1,173,201 + -1.5 1,173,234 + -0.6 1,173,240 + -1.0 1,173,241 - +0.1 1,173,277 + +0.3 1,173,468 + CA264_05065 0.21 -0.9 1,173,469 - CA264_05065 0.21 +0.1 1,173,471 - CA264_05065 0.21 +1.4 1,173,513 - CA264_05065 0.26 -2.0 1,173,524 - CA264_05065 0.27 +1.1 1,173,524 - CA264_05065 0.27 +0.1 1,173,528 - CA264_05065 0.27 -0.6 1,173,528 - CA264_05065 0.27 +1.0 1,173,532 + CA264_05065 0.27 -2.3 1,173,563 - CA264_05065 0.31 +0.5 1,173,585 + CA264_05065 0.33 -1.5
Or see this region's nucleotide sequence