Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_03915

Experiment: m.b. Dimethyl Sulfoxide 10 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_03910 and CA264_03915 are separated by 178 nucleotidesCA264_03915 and CA264_03920 are separated by 3 nucleotides CA264_03910: CA264_03910 - family 2 glycosyl transferase, at 909,820 to 910,911 _03910 CA264_03915: CA264_03915 - hydrolase TatD, at 911,090 to 911,857 _03915 CA264_03920: CA264_03920 - L-asparaginase 1, at 911,861 to 912,928 _03920 Position (kb) 911 912Strain fitness (log2 ratio) -3 -2 -1 0 1at 910.105 kb on + strand, within CA264_03910at 910.106 kb on - strand, within CA264_03910at 910.106 kb on - strand, within CA264_03910at 910.107 kb on + strand, within CA264_03910at 910.107 kb on + strand, within CA264_03910at 910.108 kb on - strand, within CA264_03910at 910.108 kb on - strand, within CA264_03910at 910.108 kb on - strand, within CA264_03910at 910.348 kb on + strand, within CA264_03910at 910.348 kb on + strand, within CA264_03910at 910.353 kb on - strand, within CA264_03910at 910.436 kb on - strand, within CA264_03910at 910.436 kb on - strand, within CA264_03910at 910.463 kb on + strand, within CA264_03910at 910.470 kb on + strand, within CA264_03910at 910.471 kb on - strand, within CA264_03910at 910.538 kb on - strand, within CA264_03910at 910.575 kb on + strand, within CA264_03910at 910.582 kb on - strand, within CA264_03910at 910.582 kb on - strand, within CA264_03910at 910.640 kb on - strand, within CA264_03910at 910.640 kb on - strand, within CA264_03910at 910.672 kb on + strand, within CA264_03910at 910.704 kb on + strand, within CA264_03910at 910.705 kb on - strand, within CA264_03910at 910.740 kb on + strand, within CA264_03910at 910.741 kb on - strandat 910.763 kb on - strand, within CA264_03910at 910.807 kb on + strandat 910.807 kb on + strandat 910.808 kb on - strandat 910.813 kb on + strandat 910.814 kb on - strandat 910.814 kb on - strandat 910.814 kb on - strandat 910.814 kb on - strandat 910.829 kb on + strandat 910.830 kb on - strandat 910.830 kb on - strandat 910.830 kb on - strandat 910.853 kb on + strandat 910.853 kb on + strandat 910.854 kb on - strandat 910.857 kb on + strandat 910.857 kb on + strandat 910.864 kb on + strandat 910.881 kb on + strandat 910.882 kb on - strandat 910.910 kb on - strandat 910.924 kb on + strandat 911.033 kb on - strandat 911.042 kb on + strandat 911.042 kb on + strandat 911.074 kb on - strandat 911.087 kb on + strandat 911.087 kb on + strandat 911.087 kb on + strandat 911.088 kb on - strandat 911.088 kb on - strandat 911.088 kb on - strandat 911.116 kb on + strandat 911.117 kb on - strandat 911.120 kb on + strandat 911.181 kb on + strand, within CA264_03915at 911.218 kb on + strand, within CA264_03915at 911.219 kb on - strand, within CA264_03915at 911.250 kb on - strand, within CA264_03915at 911.387 kb on + strand, within CA264_03915at 911.666 kb on + strand, within CA264_03915at 911.667 kb on - strand, within CA264_03915at 911.708 kb on + strand, within CA264_03915at 911.709 kb on - strand, within CA264_03915at 911.753 kb on + strand, within CA264_03915at 911.753 kb on + strand, within CA264_03915at 911.855 kb on + strandat 911.861 kb on - strandat 911.877 kb on + strandat 911.884 kb on - strandat 911.884 kb on - strandat 911.919 kb on + strandat 911.923 kb on + strandat 911.923 kb on + strandat 911.931 kb on - strandat 911.931 kb on - strandat 912.003 kb on + strand, within CA264_03920at 912.038 kb on + strand, within CA264_03920at 912.082 kb on + strand, within CA264_03920at 912.124 kb on - strand, within CA264_03920at 912.134 kb on + strand, within CA264_03920at 912.143 kb on + strand, within CA264_03920at 912.144 kb on - strand, within CA264_03920at 912.144 kb on - strand, within CA264_03920at 912.185 kb on + strand, within CA264_03920at 912.206 kb on + strand, within CA264_03920at 912.358 kb on + strand, within CA264_03920at 912.358 kb on + strand, within CA264_03920at 912.359 kb on - strand, within CA264_03920at 912.363 kb on - strand, within CA264_03920at 912.474 kb on + strand, within CA264_03920at 912.479 kb on + strand, within CA264_03920at 912.519 kb on + strand, within CA264_03920at 912.520 kb on - strand, within CA264_03920at 912.520 kb on - strand, within CA264_03920at 912.523 kb on - strand, within CA264_03920at 912.576 kb on + strand, within CA264_03920at 912.775 kb on + strand, within CA264_03920at 912.775 kb on + strand, within CA264_03920at 912.776 kb on - strand, within CA264_03920at 912.776 kb on - strand, within CA264_03920at 912.776 kb on - strand, within CA264_03920at 912.776 kb on - strand, within CA264_03920at 912.786 kb on + strand, within CA264_03920at 912.817 kb on + strand, within CA264_03920at 912.818 kb on - strand, within CA264_03920

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol%
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910,105 + CA264_03910 0.26 +1.3
910,106 - CA264_03910 0.26 +0.4
910,106 - CA264_03910 0.26 -0.2
910,107 + CA264_03910 0.26 +0.0
910,107 + CA264_03910 0.26 +0.8
910,108 - CA264_03910 0.26 -0.9
910,108 - CA264_03910 0.26 -0.2
910,108 - CA264_03910 0.26 +0.4
910,348 + CA264_03910 0.48 +0.4
910,348 + CA264_03910 0.48 -1.4
910,353 - CA264_03910 0.49 +0.7
910,436 - CA264_03910 0.56 +1.2
910,436 - CA264_03910 0.56 -0.4
910,463 + CA264_03910 0.59 -0.2
910,470 + CA264_03910 0.60 +0.4
910,471 - CA264_03910 0.60 -0.3
910,538 - CA264_03910 0.66 +0.0
910,575 + CA264_03910 0.69 -0.2
910,582 - CA264_03910 0.70 +0.0
910,582 - CA264_03910 0.70 -0.2
910,640 - CA264_03910 0.75 +0.5
910,640 - CA264_03910 0.75 +1.6
910,672 + CA264_03910 0.78 +0.5
910,704 + CA264_03910 0.81 +0.7
910,705 - CA264_03910 0.81 -1.6
910,740 + CA264_03910 0.84 +0.3
910,741 - -0.3
910,763 - CA264_03910 0.86 +0.5
910,807 + +1.3
910,807 + +1.3
910,808 - +0.7
910,813 + +0.9
910,814 - -0.5
910,814 - -0.7
910,814 - -0.2
910,814 - -0.7
910,829 + +0.0
910,830 - +1.0
910,830 - -1.2
910,830 - +1.3
910,853 + -0.4
910,853 + +1.1
910,854 - -0.2
910,857 + +0.6
910,857 + +0.3
910,864 + +0.4
910,881 + +0.5
910,882 - -0.9
910,910 - +0.3
910,924 + -0.0
911,033 - -1.5
911,042 + -0.6
911,042 + +0.8
911,074 - -0.7
911,087 + +0.9
911,087 + +0.1
911,087 + +0.1
911,088 - +0.4
911,088 - +0.3
911,088 - +0.1
911,116 + -1.2
911,117 - -3.6
911,120 + -0.9
911,181 + CA264_03915 0.12 -1.7
911,218 + CA264_03915 0.17 -1.1
911,219 - CA264_03915 0.17 -2.4
911,250 - CA264_03915 0.21 -1.7
911,387 + CA264_03915 0.39 -0.0
911,666 + CA264_03915 0.75 -0.7
911,667 - CA264_03915 0.75 -1.3
911,708 + CA264_03915 0.80 -1.4
911,709 - CA264_03915 0.81 -1.4
911,753 + CA264_03915 0.86 -0.6
911,753 + CA264_03915 0.86 -2.0
911,855 + -0.3
911,861 - +0.5
911,877 + -0.1
911,884 - +0.2
911,884 - -0.0
911,919 + -0.3
911,923 + -0.9
911,923 + +1.6
911,931 - -0.3
911,931 - +0.0
912,003 + CA264_03920 0.13 +0.1
912,038 + CA264_03920 0.17 -0.9
912,082 + CA264_03920 0.21 -0.5
912,124 - CA264_03920 0.25 -0.7
912,134 + CA264_03920 0.26 +0.8
912,143 + CA264_03920 0.26 +1.2
912,144 - CA264_03920 0.26 +0.2
912,144 - CA264_03920 0.26 +0.7
912,185 + CA264_03920 0.30 +1.3
912,206 + CA264_03920 0.32 -0.4
912,358 + CA264_03920 0.47 -1.0
912,358 + CA264_03920 0.47 -0.4
912,359 - CA264_03920 0.47 -0.9
912,363 - CA264_03920 0.47 -0.4
912,474 + CA264_03920 0.57 +0.2
912,479 + CA264_03920 0.58 -0.3
912,519 + CA264_03920 0.62 -0.5
912,520 - CA264_03920 0.62 -1.6
912,520 - CA264_03920 0.62 -0.1
912,523 - CA264_03920 0.62 -0.7
912,576 + CA264_03920 0.67 -1.2
912,775 + CA264_03920 0.86 -1.2
912,775 + CA264_03920 0.86 +1.3
912,776 - CA264_03920 0.86 +1.3
912,776 - CA264_03920 0.86 -0.5
912,776 - CA264_03920 0.86 +0.1
912,776 - CA264_03920 0.86 -0.5
912,786 + CA264_03920 0.87 -0.9
912,817 + CA264_03920 0.90 +0.3
912,818 - CA264_03920 0.90 +0.7

Or see this region's nucleotide sequence