Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02905 and CA264_02910 are separated by 103 nucleotides CA264_02910 and CA264_02915 are separated by 132 nucleotides CA264_02915 and CA264_02920 are separated by 298 nucleotides CA264_02920 and CA264_02925 overlap by 17 nucleotides
CA264_02905: CA264_02905 - hypothetical protein, at 662,025 to 662,831
_02905
CA264_02910: CA264_02910 - hypothetical protein, at 662,935 to 663,306
_02910
CA264_02915: CA264_02915 - hypothetical protein, at 663,439 to 663,819
_02915
CA264_02920: CA264_02920 - response regulator, at 664,118 to 664,525
_02920
CA264_02925: CA264_02925 - hypothetical protein, at 664,509 to 667,886
_02925
Position (kb) 663
664 Strain fitness (log2 ratio) -2
-1
0
1
2 at 662.444 kb on + strand, within CA264_02905 at 662.648 kb on + strand, within CA264_02905 at 662.694 kb on - strand, within CA264_02905 at 662.701 kb on - strand, within CA264_02905 at 662.701 kb on - strand, within CA264_02905 at 662.701 kb on - strand, within CA264_02905 at 662.732 kb on + strand, within CA264_02905 at 662.732 kb on + strand, within CA264_02905 at 662.732 kb on + strand, within CA264_02905 at 662.732 kb on + strand, within CA264_02905 at 662.733 kb on - strand, within CA264_02905 at 662.733 kb on - strand, within CA264_02905 at 662.733 kb on - strand, within CA264_02905 at 662.733 kb on - strand, within CA264_02905 at 662.735 kb on - strand, within CA264_02905 at 662.742 kb on + strand, within CA264_02905 at 662.743 kb on - strand, within CA264_02905 at 662.743 kb on - strand, within CA264_02905 at 662.796 kb on + strand at 662.796 kb on + strand at 662.797 kb on - strand at 662.797 kb on - strand at 662.803 kb on - strand at 662.823 kb on - strand at 662.865 kb on - strand at 662.902 kb on + strand at 662.903 kb on - strand at 662.918 kb on + strand at 662.919 kb on - strand at 662.919 kb on - strand at 662.952 kb on + strand at 662.991 kb on + strand, within CA264_02910 at 662.998 kb on + strand, within CA264_02910 at 662.999 kb on - strand, within CA264_02910 at 663.137 kb on - strand, within CA264_02910 at 663.154 kb on - strand, within CA264_02910 at 663.207 kb on + strand, within CA264_02910 at 663.325 kb on - strand at 663.325 kb on - strand at 663.344 kb on + strand at 663.345 kb on - strand at 663.349 kb on - strand at 663.370 kb on + strand at 663.377 kb on + strand at 663.378 kb on - strand at 663.427 kb on + strand at 663.444 kb on - strand at 663.492 kb on - strand, within CA264_02915 at 663.500 kb on + strand, within CA264_02915 at 663.548 kb on + strand, within CA264_02915 at 663.548 kb on + strand, within CA264_02915 at 663.548 kb on + strand, within CA264_02915 at 663.602 kb on + strand, within CA264_02915 at 663.603 kb on - strand, within CA264_02915 at 663.660 kb on + strand, within CA264_02915 at 663.665 kb on + strand, within CA264_02915 at 663.798 kb on + strand at 663.798 kb on + strand at 663.798 kb on + strand at 663.825 kb on + strand at 663.825 kb on + strand at 663.826 kb on - strand at 663.828 kb on - strand at 663.828 kb on - strand at 663.828 kb on - strand at 663.828 kb on - strand at 663.832 kb on + strand at 663.833 kb on - strand at 663.869 kb on + strand at 663.870 kb on - strand at 663.874 kb on - strand at 663.874 kb on - strand at 663.880 kb on - strand at 663.880 kb on - strand at 663.880 kb on - strand at 663.880 kb on - strand at 664.087 kb on + strand at 664.088 kb on - strand at 664.128 kb on + strand at 664.129 kb on - strand at 664.187 kb on + strand, within CA264_02920 at 664.188 kb on - strand, within CA264_02920 at 664.225 kb on + strand, within CA264_02920 at 664.246 kb on + strand, within CA264_02920 at 664.247 kb on - strand, within CA264_02920 at 664.280 kb on + strand, within CA264_02920 at 664.291 kb on - strand, within CA264_02920 at 664.333 kb on + strand, within CA264_02920 at 664.334 kb on - strand, within CA264_02920 at 664.345 kb on + strand, within CA264_02920 at 664.346 kb on - strand, within CA264_02920 at 664.482 kb on - strand, within CA264_02920 at 664.528 kb on + strand at 664.534 kb on - strand at 664.605 kb on + strand at 664.606 kb on - strand at 664.624 kb on - strand at 664.673 kb on + strand at 664.676 kb on - strand at 664.713 kb on + strand at 664.735 kb on - strand at 664.751 kb on - strand at 664.759 kb on - strand at 664.765 kb on + strand at 664.766 kb on - strand at 664.773 kb on - strand at 664.808 kb on - strand at 664.813 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 662,444 + CA264_02905 0.52 -0.5 662,648 + CA264_02905 0.77 -0.7 662,694 - CA264_02905 0.83 -1.1 662,701 - CA264_02905 0.84 -0.1 662,701 - CA264_02905 0.84 -0.7 662,701 - CA264_02905 0.84 +1.0 662,732 + CA264_02905 0.88 +0.7 662,732 + CA264_02905 0.88 -0.1 662,732 + CA264_02905 0.88 -0.3 662,732 + CA264_02905 0.88 -0.8 662,733 - CA264_02905 0.88 +0.3 662,733 - CA264_02905 0.88 +1.0 662,733 - CA264_02905 0.88 +0.6 662,733 - CA264_02905 0.88 +0.4 662,735 - CA264_02905 0.88 -0.9 662,742 + CA264_02905 0.89 -0.2 662,743 - CA264_02905 0.89 -0.9 662,743 - CA264_02905 0.89 +0.2 662,796 + -0.5 662,796 + -0.3 662,797 - -0.0 662,797 - +0.3 662,803 - +0.1 662,823 - +0.2 662,865 - -1.6 662,902 + -0.3 662,903 - -0.1 662,918 + -0.1 662,919 - -1.3 662,919 - +0.6 662,952 + -0.4 662,991 + CA264_02910 0.15 -0.0 662,998 + CA264_02910 0.17 -0.3 662,999 - CA264_02910 0.17 -1.5 663,137 - CA264_02910 0.54 +0.2 663,154 - CA264_02910 0.59 +0.1 663,207 + CA264_02910 0.73 +0.1 663,325 - +0.1 663,325 - -0.3 663,344 + +0.1 663,345 - +1.8 663,349 - -1.0 663,370 + +1.0 663,377 + -0.8 663,378 - +0.1 663,427 + +0.1 663,444 - -1.0 663,492 - CA264_02915 0.14 -0.4 663,500 + CA264_02915 0.16 -0.6 663,548 + CA264_02915 0.29 -0.5 663,548 + CA264_02915 0.29 -0.4 663,548 + CA264_02915 0.29 +0.3 663,602 + CA264_02915 0.43 -0.3 663,603 - CA264_02915 0.43 -0.6 663,660 + CA264_02915 0.58 -0.4 663,665 + CA264_02915 0.59 -0.6 663,798 + +0.2 663,798 + -0.1 663,798 + -1.0 663,825 + -1.5 663,825 + -0.4 663,826 - -0.2 663,828 - +0.3 663,828 - -1.0 663,828 - -0.4 663,828 - +0.5 663,832 + +2.3 663,833 - -0.3 663,869 + +0.1 663,870 - -1.2 663,874 - +0.8 663,874 - -1.0 663,880 - +0.0 663,880 - -0.3 663,880 - -0.6 663,880 - -0.2 664,087 + -0.0 664,088 - -1.1 664,128 + -0.4 664,129 - +0.3 664,187 + CA264_02920 0.17 -0.1 664,188 - CA264_02920 0.17 +0.9 664,225 + CA264_02920 0.26 +0.4 664,246 + CA264_02920 0.31 -0.3 664,247 - CA264_02920 0.32 -1.3 664,280 + CA264_02920 0.40 -0.3 664,291 - CA264_02920 0.42 -0.3 664,333 + CA264_02920 0.53 +0.2 664,334 - CA264_02920 0.53 -0.3 664,345 + CA264_02920 0.56 -0.6 664,346 - CA264_02920 0.56 +1.0 664,482 - CA264_02920 0.89 -0.2 664,528 + +1.7 664,534 - +0.2 664,605 + -0.6 664,606 - -1.4 664,624 - -1.8 664,673 + -0.1 664,676 - -0.0 664,713 + +2.6 664,735 - +0.4 664,751 - +0.0 664,759 - +0.6 664,765 + +0.4 664,766 - -0.0 664,773 - -0.6 664,808 - -1.0 664,813 - +0.1
Or see this region's nucleotide sequence