Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01900 and CA264_01905 are separated by 470 nucleotides CA264_01905 and CA264_01910 are separated by 227 nucleotides
CA264_01900: CA264_01900 - hypothetical protein, at 442,590 to 443,381
_01900
CA264_01905: CA264_01905 - cystathionine beta-synthase, at 443,852 to 445,696
_01905
CA264_01910: CA264_01910 - transposase, at 445,924 to 446,472
_01910
Position (kb) 443
444
445
446 Strain fitness (log2 ratio) -2
-1
0
1
2 at 442.871 kb on + strand, within CA264_01900 at 442.872 kb on - strand, within CA264_01900 at 443.061 kb on - strand, within CA264_01900 at 443.062 kb on + strand, within CA264_01900 at 443.063 kb on - strand, within CA264_01900 at 443.063 kb on - strand, within CA264_01900 at 443.141 kb on + strand, within CA264_01900 at 443.242 kb on + strand, within CA264_01900 at 443.261 kb on - strand, within CA264_01900 at 443.324 kb on - strand at 443.377 kb on + strand at 443.377 kb on + strand at 443.443 kb on + strand at 443.444 kb on - strand at 443.473 kb on - strand at 443.536 kb on - strand at 443.542 kb on - strand at 443.542 kb on - strand at 443.581 kb on + strand at 443.582 kb on - strand at 443.619 kb on + strand at 443.620 kb on - strand at 443.620 kb on - strand at 443.620 kb on - strand at 443.620 kb on - strand at 443.631 kb on + strand at 443.656 kb on + strand at 443.665 kb on - strand at 443.668 kb on + strand at 443.668 kb on + strand at 443.669 kb on - strand at 443.669 kb on - strand at 443.679 kb on - strand at 443.709 kb on + strand at 443.710 kb on - strand at 443.821 kb on + strand at 443.848 kb on + strand at 443.852 kb on - strand at 443.852 kb on - strand at 443.941 kb on + strand at 444.053 kb on + strand, within CA264_01905 at 444.055 kb on + strand, within CA264_01905 at 444.064 kb on - strand, within CA264_01905 at 444.191 kb on - strand, within CA264_01905 at 444.218 kb on - strand, within CA264_01905 at 444.267 kb on - strand, within CA264_01905 at 444.267 kb on - strand, within CA264_01905 at 444.314 kb on - strand, within CA264_01905 at 444.361 kb on - strand, within CA264_01905 at 444.435 kb on + strand, within CA264_01905 at 444.499 kb on - strand, within CA264_01905 at 444.604 kb on - strand, within CA264_01905 at 444.604 kb on - strand, within CA264_01905 at 444.645 kb on + strand, within CA264_01905 at 444.667 kb on + strand, within CA264_01905 at 444.860 kb on - strand, within CA264_01905 at 445.027 kb on + strand, within CA264_01905 at 445.030 kb on - strand, within CA264_01905 at 445.274 kb on - strand, within CA264_01905 at 445.298 kb on + strand, within CA264_01905 at 445.457 kb on + strand, within CA264_01905 at 445.524 kb on - strand at 445.567 kb on - strand at 445.695 kb on - strand at 445.710 kb on - strand at 445.715 kb on - strand at 445.731 kb on + strand at 445.732 kb on - strand at 445.735 kb on + strand at 445.735 kb on + strand at 445.735 kb on + strand at 445.735 kb on + strand at 445.736 kb on - strand at 445.736 kb on - strand at 445.736 kb on - strand at 445.736 kb on - strand at 445.760 kb on + strand at 445.761 kb on - strand at 445.761 kb on - strand at 445.769 kb on + strand at 445.769 kb on + strand at 445.769 kb on + strand at 445.769 kb on + strand at 445.769 kb on + strand at 445.769 kb on + strand at 445.803 kb on + strand at 445.803 kb on + strand at 445.803 kb on + strand at 445.803 kb on + strand at 445.803 kb on + strand at 445.804 kb on - strand at 445.804 kb on - strand at 445.804 kb on - strand at 445.853 kb on - strand at 445.863 kb on + strand at 445.901 kb on - strand at 445.910 kb on + strand at 445.910 kb on + strand at 445.910 kb on + strand at 445.910 kb on + strand at 445.911 kb on - strand at 445.939 kb on - strand at 445.941 kb on + strand at 445.942 kb on - strand at 445.967 kb on + strand at 445.985 kb on + strand, within CA264_01910 at 445.985 kb on + strand, within CA264_01910 at 445.986 kb on - strand, within CA264_01910 at 445.989 kb on + strand, within CA264_01910 at 445.990 kb on - strand, within CA264_01910 at 446.041 kb on - strand, within CA264_01910 at 446.042 kb on + strand, within CA264_01910 at 446.042 kb on + strand, within CA264_01910 at 446.043 kb on - strand, within CA264_01910 at 446.043 kb on - strand, within CA264_01910 at 446.043 kb on - strand, within CA264_01910 at 446.077 kb on - strand, within CA264_01910 at 446.227 kb on - strand, within CA264_01910 at 446.227 kb on - strand, within CA264_01910 at 446.307 kb on + strand, within CA264_01910 at 446.352 kb on + strand, within CA264_01910 at 446.353 kb on - strand, within CA264_01910 at 446.353 kb on - strand, within CA264_01910 at 446.378 kb on + strand, within CA264_01910 at 446.379 kb on - strand, within CA264_01910 at 446.410 kb on + strand, within CA264_01910 at 446.410 kb on + strand, within CA264_01910 at 446.411 kb on - strand, within CA264_01910 at 446.432 kb on + strand at 446.435 kb on - strand at 446.460 kb on - strand at 446.472 kb on + strand at 446.473 kb on - strand at 446.479 kb on + strand at 446.479 kb on + strand at 446.480 kb on - strand at 446.480 kb on - strand at 446.482 kb on + strand at 446.483 kb on - strand at 446.483 kb on - strand at 446.483 kb on - strand at 446.490 kb on - strand at 446.500 kb on + strand at 446.500 kb on + strand at 446.501 kb on - strand at 446.509 kb on - strand at 446.538 kb on + strand at 446.538 kb on + strand at 446.539 kb on - strand at 446.545 kb on + strand at 446.549 kb on + strand at 446.550 kb on - strand at 446.550 kb on - strand at 446.695 kb on - strand at 446.695 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 442,871 + CA264_01900 0.35 +2.4 442,872 - CA264_01900 0.36 -0.8 443,061 - CA264_01900 0.59 +0.6 443,062 + CA264_01900 0.60 +1.1 443,063 - CA264_01900 0.60 -0.8 443,063 - CA264_01900 0.60 -0.0 443,141 + CA264_01900 0.70 -0.1 443,242 + CA264_01900 0.82 +0.3 443,261 - CA264_01900 0.85 +1.0 443,324 - +0.7 443,377 + +0.6 443,377 + -0.3 443,443 + +0.4 443,444 - -0.2 443,473 - -0.2 443,536 - -1.3 443,542 - +0.2 443,542 - +0.2 443,581 + -1.3 443,582 - -0.1 443,619 + +0.2 443,620 - +1.1 443,620 - +0.3 443,620 - -0.6 443,620 - +0.8 443,631 + -0.1 443,656 + -0.4 443,665 - +1.4 443,668 + -0.7 443,668 + +0.2 443,669 - +1.3 443,669 - +0.4 443,679 - +1.5 443,709 + +0.1 443,710 - +0.8 443,821 + -0.2 443,848 + -0.9 443,852 - -0.5 443,852 - -0.4 443,941 + +0.6 444,053 + CA264_01905 0.11 +0.7 444,055 + CA264_01905 0.11 +1.4 444,064 - CA264_01905 0.11 +0.2 444,191 - CA264_01905 0.18 -0.8 444,218 - CA264_01905 0.20 -0.8 444,267 - CA264_01905 0.22 -0.1 444,267 - CA264_01905 0.22 +0.8 444,314 - CA264_01905 0.25 -0.8 444,361 - CA264_01905 0.28 +0.3 444,435 + CA264_01905 0.32 +0.3 444,499 - CA264_01905 0.35 -0.3 444,604 - CA264_01905 0.41 -0.0 444,604 - CA264_01905 0.41 +0.3 444,645 + CA264_01905 0.43 -0.4 444,667 + CA264_01905 0.44 +0.7 444,860 - CA264_01905 0.55 +0.5 445,027 + CA264_01905 0.64 -0.8 445,030 - CA264_01905 0.64 +0.4 445,274 - CA264_01905 0.77 -0.1 445,298 + CA264_01905 0.78 +0.3 445,457 + CA264_01905 0.87 +0.6 445,524 - -0.1 445,567 - +0.3 445,695 - -0.4 445,710 - +0.4 445,715 - +0.4 445,731 + -0.0 445,732 - -0.6 445,735 + -0.4 445,735 + +0.3 445,735 + -1.4 445,735 + -0.6 445,736 - +1.6 445,736 - +0.1 445,736 - +0.5 445,736 - -0.4 445,760 + -0.4 445,761 - -0.6 445,761 - -0.6 445,769 + -0.1 445,769 + -0.7 445,769 + +0.3 445,769 + -0.8 445,769 + -0.5 445,769 + +0.3 445,803 + -0.8 445,803 + -0.2 445,803 + -0.0 445,803 + -0.5 445,803 + +0.9 445,804 - +0.2 445,804 - -1.1 445,804 - +0.2 445,853 - -0.3 445,863 + +0.4 445,901 - +0.8 445,910 + -0.2 445,910 + +0.1 445,910 + -0.7 445,910 + -0.3 445,911 - -0.0 445,939 - -0.3 445,941 + -1.9 445,942 - +0.6 445,967 + -0.2 445,985 + CA264_01910 0.11 +0.2 445,985 + CA264_01910 0.11 -0.9 445,986 - CA264_01910 0.11 +0.6 445,989 + CA264_01910 0.12 +0.5 445,990 - CA264_01910 0.12 -0.5 446,041 - CA264_01910 0.21 +1.1 446,042 + CA264_01910 0.21 +0.9 446,042 + CA264_01910 0.21 +2.4 446,043 - CA264_01910 0.22 +0.2 446,043 - CA264_01910 0.22 +1.1 446,043 - CA264_01910 0.22 +1.1 446,077 - CA264_01910 0.28 -0.3 446,227 - CA264_01910 0.55 +0.1 446,227 - CA264_01910 0.55 -0.4 446,307 + CA264_01910 0.70 +0.1 446,352 + CA264_01910 0.78 +0.8 446,353 - CA264_01910 0.78 +0.6 446,353 - CA264_01910 0.78 +1.1 446,378 + CA264_01910 0.83 -0.5 446,379 - CA264_01910 0.83 +1.5 446,410 + CA264_01910 0.89 -0.6 446,410 + CA264_01910 0.89 -0.3 446,411 - CA264_01910 0.89 +0.4 446,432 + +0.0 446,435 - -0.1 446,460 - +0.7 446,472 + -0.6 446,473 - +0.4 446,479 + -0.3 446,479 + +0.6 446,480 - +0.7 446,480 - -0.9 446,482 + -1.0 446,483 - -0.2 446,483 - +1.0 446,483 - -0.3 446,490 - +0.2 446,500 + -0.2 446,500 + -0.1 446,501 - +0.1 446,509 - +0.2 446,538 + -1.3 446,538 + +1.1 446,539 - -0.2 446,545 + +0.3 446,549 + -0.5 446,550 - +0.6 446,550 - +0.1 446,695 - -0.9 446,695 - +0.4
Or see this region's nucleotide sequence