Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01610 and CA264_01615 are separated by 186 nucleotides CA264_01615 and CA264_01620 are separated by 159 nucleotides
CA264_01610: CA264_01610 - arginine--tRNA ligase, at 377,391 to 379,181
_01610
CA264_01615: CA264_01615 - glutathione peroxidase, at 379,368 to 379,871
_01615
CA264_01620: CA264_01620 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase, at 380,031 to 380,924
_01620
Position (kb) 379
380 Strain fitness (log2 ratio) -2
-1
0
1 at 379.179 kb on + strand at 379.182 kb on + strand at 379.182 kb on + strand at 379.186 kb on + strand at 379.186 kb on + strand at 379.186 kb on + strand at 379.187 kb on - strand at 379.188 kb on + strand at 379.188 kb on + strand at 379.266 kb on - strand at 379.312 kb on + strand at 379.312 kb on + strand at 379.316 kb on + strand at 379.349 kb on + strand at 379.355 kb on + strand at 379.355 kb on + strand at 379.356 kb on - strand at 379.424 kb on + strand, within CA264_01615 at 379.468 kb on - strand, within CA264_01615 at 379.516 kb on - strand, within CA264_01615 at 379.527 kb on + strand, within CA264_01615 at 379.528 kb on - strand, within CA264_01615 at 379.656 kb on + strand, within CA264_01615 at 379.657 kb on - strand, within CA264_01615 at 379.663 kb on + strand, within CA264_01615 at 379.815 kb on + strand, within CA264_01615 at 379.918 kb on - strand at 379.922 kb on + strand at 379.922 kb on + strand at 379.923 kb on - strand at 379.923 kb on - strand at 379.925 kb on - strand at 379.934 kb on - strand at 379.981 kb on - strand at 379.981 kb on - strand at 379.982 kb on + strand at 379.982 kb on + strand at 379.995 kb on - strand at 380.031 kb on - strand at 380.031 kb on - strand at 380.031 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 379,179 + -0.4 379,182 + -0.0 379,182 + +0.6 379,186 + +0.0 379,186 + -0.0 379,186 + -0.4 379,187 - +0.4 379,188 + +0.6 379,188 + +1.1 379,266 - -1.1 379,312 + -0.0 379,312 + +0.1 379,316 + +0.2 379,349 + +0.7 379,355 + +0.4 379,355 + -0.4 379,356 - +1.2 379,424 + CA264_01615 0.11 +0.0 379,468 - CA264_01615 0.20 -0.8 379,516 - CA264_01615 0.29 +0.0 379,527 + CA264_01615 0.32 -0.4 379,528 - CA264_01615 0.32 -0.8 379,656 + CA264_01615 0.57 +0.7 379,657 - CA264_01615 0.57 -0.9 379,663 + CA264_01615 0.59 -0.5 379,815 + CA264_01615 0.89 -0.3 379,918 - +0.7 379,922 + +0.1 379,922 + +0.1 379,923 - -0.4 379,923 - -0.4 379,925 - +0.0 379,934 - -1.9 379,981 - -0.7 379,981 - -1.1 379,982 + -0.8 379,982 + -0.3 379,995 - +0.4 380,031 - -0.4 380,031 - -0.2 380,031 - +0.0
Or see this region's nucleotide sequence