Strain Fitness in Pseudomonas simiae WCS417 around PS417_23730

Experiment: Nalidixic 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.015 mg/ml
5,130,273	+		PS417_23725	0.72	-2.2
5,130,273	+		PS417_23725	0.72	-1.0
5,130,274	-		PS417_23725	0.72	+0.4
5,130,277	+		PS417_23725	0.72	-2.2
5,130,716	+				-1.5
5,130,717	-				+0.1
5,130,717	-				+0.6
5,130,720	+				-0.1
5,130,721	-				+0.3
5,130,721	-				-0.7
5,130,782	+				-0.8
5,130,782	+				+0.0
5,130,782	+				+0.1
5,130,783	-				-0.8
5,130,783	-				+0.3
5,130,783	-				+0.1
5,130,783	-				-0.1
5,130,944	-		PS417_23730	0.12	-0.2
5,130,944	-		PS417_23730	0.12	-0.7
5,131,316	-		PS417_23730	0.51	+1.0
5,131,316	-		PS417_23730	0.51	+0.1
5,131,355	-		PS417_23730	0.55	-0.1
5,131,369	+		PS417_23730	0.57	-0.0
5,131,370	-		PS417_23730	0.57	-0.8
5,131,370	-		PS417_23730	0.57	+0.2
5,131,426	-		PS417_23730	0.63	+0.5
5,131,432	+		PS417_23730	0.64	-0.0
5,131,432	+		PS417_23730	0.64	-0.2
5,131,432	+		PS417_23730	0.64	-1.2
5,131,432	+		PS417_23730	0.64	-0.0
5,131,512	+		PS417_23730	0.72	+0.2
5,131,531	+		PS417_23730	0.74	+0.4
5,131,531	+		PS417_23730	0.74	-0.1
5,131,532	-		PS417_23730	0.74	+0.0
5,131,627	-		PS417_23730	0.84	-0.3
5,131,651	+				+0.5
5,131,651	+		PS417_23730	0.87	+0.4
5,131,651	+		PS417_23730	0.87	+0.6
5,131,652	-		PS417_23730	0.87	-1.1
5,131,686	+				+0.5
5,131,686	+				-0.5
5,131,687	-				-1.1
5,131,687	-				+0.3
5,131,687	-				+0.4
5,131,702	+				+0.6
5,131,703	-				+0.4
5,131,703	-				-0.7
5,131,703	-				+0.1
5,131,761	-				-0.4
5,131,761	-				+1.0
5,131,836	+				+0.5
5,131,836	+				+0.6
5,131,880	+				+0.1
5,131,881	-				-0.2
5,131,937	+				+0.9
5,131,937	+				-1.3
5,131,938	-				-1.9
5,131,969	+				-0.1
5,132,085	-				+1.1
5,132,085	-				-0.3
5,132,085	-				+0.9
5,132,113	-				+0.7
5,132,176	+				+0.5
5,132,176	+		PS417_23735	0.24	+0.8
5,132,263	+		PS417_23735	0.54	-1.0
5,132,314	+		PS417_23735	0.71	-0.3
5,132,314	+		PS417_23735	0.71	-0.1
5,132,332	+		PS417_23735	0.77	+0.8
5,132,332	+		PS417_23735	0.77	-1.0
5,132,333	-		PS417_23735	0.78	-2.2
5,132,333	-		PS417_23735	0.78	+0.2
5,132,360	+		PS417_23735	0.87	-2.1
5,132,361	-		PS417_23735	0.87	+0.5
5,132,438	+				+0.2
5,132,439	-				-0.8
5,132,439	-				-0.1
5,132,445	-				-0.4
5,132,579	+		PS417_23740	0.14	-0.8
5,132,579	+		PS417_23740	0.14	+1.0
5,132,579	+		PS417_23740	0.14	-0.0
5,132,580	-				-0.9
5,132,580	-		PS417_23740	0.14	+0.2
5,132,580	-		PS417_23740	0.14	-0.4
5,132,580	-		PS417_23740	0.14	-0.5
5,132,582	+		PS417_23740	0.15	-0.3
5,132,641	+		PS417_23740	0.21	-0.3
5,132,648	+		PS417_23740	0.22	+0.0
5,132,648	+		PS417_23740	0.22	-0.1
5,132,648	+		PS417_23740	0.22	+0.5
5,132,649	-		PS417_23740	0.22	+0.1
5,132,649	-		PS417_23740	0.22	+0.6
5,132,650	+		PS417_23740	0.22	+0.1
5,132,650	+		PS417_23740	0.22	+0.5
5,132,651	-		PS417_23740	0.22	-1.5
5,132,651	-		PS417_23740	0.22	-0.5
5,132,651	-		PS417_23740	0.22	+0.3
5,132,651	-		PS417_23740	0.22	+1.8
5,132,741	+		PS417_23740	0.31	+0.4
5,132,742	-		PS417_23740	0.32	-0.9