Strain Fitness in Pseudomonas simiae WCS417 around PS417_13705

Experiment: Nalidixic 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.015 mg/ml
3,014,364	+		PS417_13695	0.52	-2.4
3,014,364	+		PS417_13695	0.52	+0.9
3,014,418	+		PS417_13695	0.56	+0.6
3,014,418	+		PS417_13695	0.56	+0.1
3,014,419	-				+0.9
3,014,419	-		PS417_13695	0.56	+0.1
3,014,419	-		PS417_13695	0.56	+0.2
3,014,422	+		PS417_13695	0.56	+0.2
3,014,740	-		PS417_13695	0.80	+0.4
3,014,856	+		PS417_13695	0.89	-0.4
3,014,859	+		PS417_13695	0.89	-1.7
3,014,860	-		PS417_13695	0.89	+1.9
3,014,860	-		PS417_13695	0.89	+0.9
3,014,975	+				+0.6
3,015,018	-				+0.4
3,015,070	-				-0.1
3,015,070	-				+0.1
3,015,107	+				+0.9
3,015,331	+				-3.7
3,015,332	-				+0.3
3,015,358	-				-0.7
3,015,365	+				+0.6
3,015,365	+				+0.1
3,015,366	-				-0.1
3,015,366	-				+0.1
3,015,413	-				+0.5
3,015,413	-				-0.0
3,015,413	-				+0.2
3,015,413	-				+0.5
3,015,413	-				-0.0
3,015,413	-				+0.3
3,015,414	+				+0.5
3,015,414	+				-0.3
3,015,414	+				+0.1
3,015,414	+				-0.1
3,015,414	+				+1.3
3,015,414	+				+1.9
3,015,414	+				+0.4
3,015,415	-				-1.1
3,015,415	-				+0.2
3,015,415	-				+2.7
3,015,415	-				-0.7
3,015,489	+		PS417_13705	0.15	+0.1
3,015,490	-		PS417_13705	0.15	+1.1
3,015,514	-		PS417_13705	0.18	+0.5
3,015,514	-		PS417_13705	0.18	+1.3
3,015,592	-		PS417_13705	0.27	-0.0
3,015,592	-		PS417_13705	0.27	+0.2
3,015,824	-		PS417_13705	0.54	-0.1
3,016,058	+		PS417_13705	0.81	+0.0
3,016,270	-				+0.3
3,016,328	+				+0.9
3,016,451	+				+0.2
3,016,451	+				-1.7
3,016,452	-				+0.1
3,016,458	+				-0.2
3,016,459	-				-0.1
3,016,461	+				-0.9
3,016,461	+				-0.1
3,016,462	-				-0.2
3,016,537	-		PS417_13710	0.21	+0.4
3,016,556	-		PS417_13710	0.27	+0.1
3,016,563	+		PS417_13710	0.29	+0.6
3,016,564	-		PS417_13710	0.30	+0.2
3,016,766	+				+0.3
3,016,767	-				-2.1
3,016,767	-				+0.3
3,016,949	+				-1.6
3,016,949	+				-0.6
3,016,957	+				-0.2
3,016,957	+				-0.5
3,016,957	+				+0.2
3,016,957	+				+0.1
3,016,958	-				+0.6
3,016,960	-				-1.7
3,016,991	+				+2.4
3,016,991	+				+0.7
3,016,991	+				+0.8
3,016,995	+				+1.6
3,017,014	+		PS417_13715	0.14	+0.9
3,017,014	+		PS417_13715	0.14	+0.2
3,017,018	+		PS417_13715	0.16	+0.5
3,017,018	+				+1.9
3,017,018	+		PS417_13715	0.16	-0.0
3,017,038	+		PS417_13715	0.25	+0.2
3,017,125	+		PS417_13715	0.64	-0.8
3,017,126	-		PS417_13715	0.64	-0.6