Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3491 and Echvi_3492 are separated by 445 nucleotides Echvi_3492 and Echvi_3493 are separated by 0 nucleotides
Echvi_3491: Echvi_3491 - NHL repeat./Predicted periplasmic protein (DUF2233)., at 4,134,675 to 4,136,642
_3491
Echvi_3492: Echvi_3492 - Phosphate/sulphate permeases, at 4,137,088 to 4,138,110
_3492
Echvi_3493: Echvi_3493 - Fibrobacter succinogenes major domain (Fib_succ_major)., at 4,138,111 to 4,139,529
_3493
Position (kb)
4137
4138
4139 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4136.089 kb on + strand, within Echvi_3491 at 4136.093 kb on + strand, within Echvi_3491 at 4136.118 kb on - strand, within Echvi_3491 at 4136.120 kb on + strand, within Echvi_3491 at 4136.121 kb on - strand, within Echvi_3491 at 4136.193 kb on + strand, within Echvi_3491 at 4136.193 kb on + strand, within Echvi_3491 at 4136.194 kb on - strand, within Echvi_3491 at 4136.246 kb on + strand, within Echvi_3491 at 4136.247 kb on - strand, within Echvi_3491 at 4136.247 kb on - strand, within Echvi_3491 at 4136.247 kb on - strand, within Echvi_3491 at 4136.255 kb on + strand, within Echvi_3491 at 4136.267 kb on - strand, within Echvi_3491 at 4136.267 kb on - strand, within Echvi_3491 at 4136.267 kb on - strand, within Echvi_3491 at 4136.305 kb on + strand, within Echvi_3491 at 4136.309 kb on + strand, within Echvi_3491 at 4136.309 kb on + strand, within Echvi_3491 at 4136.309 kb on + strand, within Echvi_3491 at 4136.309 kb on + strand, within Echvi_3491 at 4136.309 kb on + strand, within Echvi_3491 at 4136.309 kb on + strand, within Echvi_3491 at 4136.309 kb on + strand, within Echvi_3491 at 4136.313 kb on + strand, within Echvi_3491 at 4136.313 kb on + strand, within Echvi_3491 at 4136.313 kb on + strand, within Echvi_3491 at 4136.314 kb on - strand, within Echvi_3491 at 4136.314 kb on - strand, within Echvi_3491 at 4136.314 kb on - strand, within Echvi_3491 at 4136.314 kb on - strand, within Echvi_3491 at 4136.318 kb on + strand, within Echvi_3491 at 4136.318 kb on + strand, within Echvi_3491 at 4136.318 kb on + strand, within Echvi_3491 at 4136.319 kb on - strand, within Echvi_3491 at 4136.319 kb on - strand, within Echvi_3491 at 4136.323 kb on + strand, within Echvi_3491 at 4136.324 kb on - strand, within Echvi_3491 at 4136.369 kb on + strand, within Echvi_3491 at 4136.370 kb on - strand, within Echvi_3491 at 4136.370 kb on - strand, within Echvi_3491 at 4136.428 kb on + strand, within Echvi_3491 at 4136.428 kb on + strand, within Echvi_3491 at 4136.450 kb on + strand at 4136.450 kb on + strand at 4136.451 kb on - strand at 4136.451 kb on - strand at 4136.451 kb on - strand at 4136.455 kb on + strand at 4136.456 kb on - strand at 4136.478 kb on + strand at 4136.479 kb on - strand at 4136.479 kb on - strand at 4136.484 kb on - strand at 4136.484 kb on - strand at 4136.486 kb on + strand at 4136.487 kb on - strand at 4136.487 kb on - strand at 4136.487 kb on - strand at 4136.487 kb on - strand at 4136.487 kb on - strand at 4136.490 kb on - strand at 4136.494 kb on + strand at 4136.494 kb on + strand at 4136.514 kb on + strand at 4136.516 kb on + strand at 4136.516 kb on + strand at 4136.516 kb on + strand at 4136.516 kb on + strand at 4136.517 kb on - strand at 4136.517 kb on - strand at 4136.563 kb on + strand at 4136.564 kb on - strand at 4136.564 kb on - strand at 4136.567 kb on - strand at 4136.599 kb on - strand at 4136.623 kb on + strand at 4136.671 kb on + strand at 4136.705 kb on + strand at 4136.705 kb on + strand at 4136.705 kb on + strand at 4136.706 kb on - strand at 4136.776 kb on - strand at 4136.791 kb on - strand at 4136.795 kb on + strand at 4136.800 kb on - strand at 4136.828 kb on + strand at 4136.837 kb on + strand at 4136.837 kb on + strand at 4136.838 kb on - strand at 4136.849 kb on + strand at 4136.850 kb on - strand at 4136.869 kb on + strand at 4136.870 kb on - strand at 4136.916 kb on - strand at 4136.922 kb on - strand at 4136.941 kb on + strand at 4137.064 kb on + strand at 4137.079 kb on - strand at 4137.102 kb on + strand at 4137.151 kb on - strand at 4137.191 kb on - strand, within Echvi_3492 at 4137.191 kb on - strand, within Echvi_3492 at 4137.191 kb on - strand, within Echvi_3492 at 4137.237 kb on + strand, within Echvi_3492 at 4137.238 kb on - strand, within Echvi_3492 at 4137.240 kb on + strand, within Echvi_3492 at 4137.241 kb on - strand, within Echvi_3492 at 4137.241 kb on - strand, within Echvi_3492 at 4137.241 kb on - strand, within Echvi_3492 at 4137.241 kb on - strand, within Echvi_3492 at 4137.246 kb on - strand, within Echvi_3492 at 4137.246 kb on - strand, within Echvi_3492 at 4137.305 kb on + strand, within Echvi_3492 at 4137.305 kb on + strand, within Echvi_3492 at 4137.305 kb on + strand, within Echvi_3492 at 4137.305 kb on + strand, within Echvi_3492 at 4137.306 kb on - strand, within Echvi_3492 at 4137.341 kb on + strand, within Echvi_3492 at 4137.342 kb on - strand, within Echvi_3492 at 4137.342 kb on - strand, within Echvi_3492 at 4137.345 kb on - strand, within Echvi_3492 at 4137.414 kb on + strand, within Echvi_3492 at 4137.415 kb on - strand, within Echvi_3492 at 4137.455 kb on + strand, within Echvi_3492 at 4137.456 kb on - strand, within Echvi_3492 at 4137.468 kb on + strand, within Echvi_3492 at 4137.469 kb on - strand, within Echvi_3492 at 4137.469 kb on - strand, within Echvi_3492 at 4137.478 kb on + strand, within Echvi_3492 at 4137.575 kb on + strand, within Echvi_3492 at 4137.575 kb on + strand, within Echvi_3492 at 4137.575 kb on + strand, within Echvi_3492 at 4137.575 kb on + strand, within Echvi_3492 at 4137.576 kb on - strand, within Echvi_3492 at 4137.590 kb on - strand, within Echvi_3492 at 4137.723 kb on - strand, within Echvi_3492 at 4137.910 kb on + strand, within Echvi_3492 at 4137.910 kb on + strand, within Echvi_3492 at 4137.910 kb on + strand, within Echvi_3492 at 4137.910 kb on + strand, within Echvi_3492 at 4137.910 kb on + strand, within Echvi_3492 at 4137.910 kb on + strand, within Echvi_3492 at 4137.910 kb on + strand, within Echvi_3492 at 4137.910 kb on + strand, within Echvi_3492 at 4137.911 kb on - strand, within Echvi_3492 at 4137.911 kb on - strand, within Echvi_3492 at 4137.911 kb on - strand, within Echvi_3492 at 4137.911 kb on - strand, within Echvi_3492 at 4137.911 kb on - strand, within Echvi_3492 at 4137.911 kb on - strand, within Echvi_3492 at 4137.911 kb on - strand, within Echvi_3492 at 4137.947 kb on + strand, within Echvi_3492 at 4137.984 kb on + strand, within Echvi_3492 at 4137.984 kb on + strand, within Echvi_3492 at 4137.987 kb on + strand, within Echvi_3492 at 4138.081 kb on + strand at 4138.081 kb on + strand at 4138.081 kb on + strand at 4138.081 kb on + strand at 4138.082 kb on - strand at 4138.082 kb on - strand at 4138.112 kb on + strand at 4138.113 kb on - strand at 4138.138 kb on + strand at 4138.138 kb on + strand at 4138.138 kb on + strand at 4138.139 kb on - strand at 4138.225 kb on + strand at 4138.228 kb on - strand at 4138.374 kb on + strand, within Echvi_3493 at 4138.375 kb on - strand, within Echvi_3493 at 4138.400 kb on + strand, within Echvi_3493 at 4138.400 kb on + strand, within Echvi_3493 at 4138.400 kb on + strand, within Echvi_3493 at 4138.401 kb on - strand, within Echvi_3493 at 4138.401 kb on - strand, within Echvi_3493 at 4138.451 kb on + strand, within Echvi_3493 at 4138.452 kb on - strand, within Echvi_3493 at 4138.488 kb on + strand, within Echvi_3493 at 4138.488 kb on + strand, within Echvi_3493 at 4138.489 kb on - strand, within Echvi_3493 at 4138.489 kb on - strand, within Echvi_3493 at 4138.489 kb on - strand, within Echvi_3493 at 4138.489 kb on - strand, within Echvi_3493 at 4138.489 kb on - strand, within Echvi_3493 at 4138.532 kb on - strand, within Echvi_3493 at 4138.574 kb on - strand, within Echvi_3493 at 4138.586 kb on + strand, within Echvi_3493 at 4138.590 kb on - strand, within Echvi_3493 at 4138.590 kb on - strand, within Echvi_3493 at 4138.590 kb on - strand, within Echvi_3493 at 4138.592 kb on + strand, within Echvi_3493 at 4138.593 kb on - strand, within Echvi_3493 at 4138.610 kb on + strand, within Echvi_3493 at 4138.610 kb on + strand, within Echvi_3493 at 4138.610 kb on + strand, within Echvi_3493 at 4138.610 kb on + strand, within Echvi_3493 at 4138.610 kb on + strand, within Echvi_3493 at 4138.611 kb on - strand, within Echvi_3493 at 4138.611 kb on - strand, within Echvi_3493 at 4138.611 kb on - strand, within Echvi_3493 at 4138.611 kb on - strand, within Echvi_3493 at 4138.615 kb on - strand, within Echvi_3493 at 4138.625 kb on - strand, within Echvi_3493 at 4138.635 kb on - strand, within Echvi_3493 at 4138.683 kb on + strand, within Echvi_3493 at 4138.683 kb on + strand, within Echvi_3493 at 4138.683 kb on + strand, within Echvi_3493 at 4138.684 kb on - strand, within Echvi_3493 at 4138.712 kb on + strand, within Echvi_3493 at 4138.716 kb on + strand, within Echvi_3493 at 4138.717 kb on - strand, within Echvi_3493 at 4138.801 kb on - strand, within Echvi_3493 at 4138.833 kb on - strand, within Echvi_3493 at 4138.844 kb on + strand, within Echvi_3493 at 4138.979 kb on + strand, within Echvi_3493 at 4138.980 kb on - strand, within Echvi_3493 at 4138.980 kb on - strand, within Echvi_3493 at 4139.015 kb on + strand, within Echvi_3493 at 4139.050 kb on + strand, within Echvi_3493
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 4,136,089 + Echvi_3491 0.72 -0.3 4,136,093 + Echvi_3491 0.72 -2.4 4,136,118 - Echvi_3491 0.73 +0.8 4,136,120 + Echvi_3491 0.73 -1.9 4,136,121 - Echvi_3491 0.73 +0.2 4,136,193 + Echvi_3491 0.77 +0.5 4,136,193 + Echvi_3491 0.77 -0.0 4,136,194 - Echvi_3491 0.77 +0.3 4,136,246 + Echvi_3491 0.80 -2.1 4,136,247 - Echvi_3491 0.80 -0.0 4,136,247 - Echvi_3491 0.80 -0.5 4,136,247 - Echvi_3491 0.80 -1.9 4,136,255 + Echvi_3491 0.80 -0.4 4,136,267 - Echvi_3491 0.81 +0.3 4,136,267 - Echvi_3491 0.81 -0.4 4,136,267 - Echvi_3491 0.81 +0.7 4,136,305 + Echvi_3491 0.83 +0.6 4,136,309 + Echvi_3491 0.83 -1.5 4,136,309 + Echvi_3491 0.83 -1.1 4,136,309 + Echvi_3491 0.83 +0.1 4,136,309 + Echvi_3491 0.83 +0.1 4,136,309 + Echvi_3491 0.83 +0.9 4,136,309 + Echvi_3491 0.83 -0.3 4,136,309 + Echvi_3491 0.83 -0.3 4,136,313 + Echvi_3491 0.83 +2.7 4,136,313 + Echvi_3491 0.83 -0.6 4,136,313 + Echvi_3491 0.83 -0.9 4,136,314 - Echvi_3491 0.83 -0.5 4,136,314 - Echvi_3491 0.83 -0.9 4,136,314 - Echvi_3491 0.83 +0.0 4,136,314 - Echvi_3491 0.83 +0.2 4,136,318 + Echvi_3491 0.83 -0.9 4,136,318 + Echvi_3491 0.83 +2.1 4,136,318 + Echvi_3491 0.83 -1.4 4,136,319 - Echvi_3491 0.84 +0.2 4,136,319 - Echvi_3491 0.84 +0.3 4,136,323 + Echvi_3491 0.84 +1.9 4,136,324 - Echvi_3491 0.84 +0.2 4,136,369 + Echvi_3491 0.86 -0.3 4,136,370 - Echvi_3491 0.86 +0.9 4,136,370 - Echvi_3491 0.86 -0.2 4,136,428 + Echvi_3491 0.89 +0.5 4,136,428 + Echvi_3491 0.89 -0.1 4,136,450 + +1.1 4,136,450 + +0.9 4,136,451 - +0.8 4,136,451 - +0.0 4,136,451 - -0.2 4,136,455 + -1.1 4,136,456 - -0.2 4,136,478 + +0.1 4,136,479 - +0.7 4,136,479 - +1.2 4,136,484 - +0.0 4,136,484 - -1.7 4,136,486 + -0.2 4,136,487 - +0.1 4,136,487 - -1.5 4,136,487 - +0.1 4,136,487 - +1.3 4,136,487 - -1.1 4,136,490 - -1.1 4,136,494 + -0.6 4,136,494 + +0.1 4,136,514 + +1.2 4,136,516 + -0.1 4,136,516 + +0.0 4,136,516 + -1.3 4,136,516 + +1.1 4,136,517 - +0.0 4,136,517 - -0.7 4,136,563 + -1.6 4,136,564 - -0.5 4,136,564 - -2.8 4,136,567 - +0.4 4,136,599 - -0.3 4,136,623 + +0.9 4,136,671 + -0.6 4,136,705 + -0.4 4,136,705 + -0.1 4,136,705 + +0.6 4,136,706 - +0.1 4,136,776 - +0.1 4,136,791 - -0.4 4,136,795 + -1.7 4,136,800 - -0.5 4,136,828 + +0.1 4,136,837 + -0.3 4,136,837 + +0.3 4,136,838 - -0.2 4,136,849 + -1.9 4,136,850 - -0.5 4,136,869 + +1.7 4,136,870 - -0.2 4,136,916 - -0.4 4,136,922 - -0.1 4,136,941 + +0.5 4,137,064 + -0.8 4,137,079 - -0.2 4,137,102 + +0.7 4,137,151 - +0.8 4,137,191 - Echvi_3492 0.10 -0.8 4,137,191 - Echvi_3492 0.10 -0.3 4,137,191 - Echvi_3492 0.10 +1.8 4,137,237 + Echvi_3492 0.15 +0.9 4,137,238 - Echvi_3492 0.15 +0.8 4,137,240 + Echvi_3492 0.15 -1.3 4,137,241 - Echvi_3492 0.15 -0.7 4,137,241 - Echvi_3492 0.15 -0.3 4,137,241 - Echvi_3492 0.15 +0.1 4,137,241 - Echvi_3492 0.15 -0.9 4,137,246 - Echvi_3492 0.15 -1.3 4,137,246 - Echvi_3492 0.15 +0.7 4,137,305 + Echvi_3492 0.21 +0.9 4,137,305 + Echvi_3492 0.21 +0.6 4,137,305 + Echvi_3492 0.21 +0.1 4,137,305 + Echvi_3492 0.21 -0.4 4,137,306 - Echvi_3492 0.21 +0.3 4,137,341 + Echvi_3492 0.25 -0.5 4,137,342 - Echvi_3492 0.25 +0.1 4,137,342 - Echvi_3492 0.25 -0.8 4,137,345 - Echvi_3492 0.25 -0.7 4,137,414 + Echvi_3492 0.32 +0.6 4,137,415 - Echvi_3492 0.32 -0.3 4,137,455 + Echvi_3492 0.36 +0.2 4,137,456 - Echvi_3492 0.36 +1.1 4,137,468 + Echvi_3492 0.37 +1.1 4,137,469 - Echvi_3492 0.37 +0.6 4,137,469 - Echvi_3492 0.37 +1.9 4,137,478 + Echvi_3492 0.38 +0.7 4,137,575 + Echvi_3492 0.48 +1.3 4,137,575 + Echvi_3492 0.48 -0.5 4,137,575 + Echvi_3492 0.48 -0.3 4,137,575 + Echvi_3492 0.48 +0.5 4,137,576 - Echvi_3492 0.48 -0.4 4,137,590 - Echvi_3492 0.49 +1.6 4,137,723 - Echvi_3492 0.62 +0.6 4,137,910 + Echvi_3492 0.80 +0.8 4,137,910 + Echvi_3492 0.80 -0.7 4,137,910 + Echvi_3492 0.80 +1.4 4,137,910 + Echvi_3492 0.80 +0.4 4,137,910 + Echvi_3492 0.80 +0.6 4,137,910 + Echvi_3492 0.80 +1.1 4,137,910 + Echvi_3492 0.80 +0.5 4,137,910 + Echvi_3492 0.80 +0.4 4,137,911 - Echvi_3492 0.80 +1.1 4,137,911 - Echvi_3492 0.80 +0.4 4,137,911 - Echvi_3492 0.80 +0.2 4,137,911 - Echvi_3492 0.80 +0.3 4,137,911 - Echvi_3492 0.80 -0.3 4,137,911 - Echvi_3492 0.80 +1.9 4,137,911 - Echvi_3492 0.80 +0.4 4,137,947 + Echvi_3492 0.84 +1.9 4,137,984 + Echvi_3492 0.88 +2.1 4,137,984 + Echvi_3492 0.88 +0.3 4,137,987 + Echvi_3492 0.88 -1.6 4,138,081 + -0.1 4,138,081 + +0.5 4,138,081 + -0.5 4,138,081 + +0.3 4,138,082 - +0.1 4,138,082 - +0.1 4,138,112 + -1.9 4,138,113 - +1.5 4,138,138 + +0.9 4,138,138 + -0.2 4,138,138 + -2.4 4,138,139 - -2.4 4,138,225 + -0.2 4,138,228 - -0.0 4,138,374 + Echvi_3493 0.19 +1.0 4,138,375 - Echvi_3493 0.19 -1.7 4,138,400 + Echvi_3493 0.20 +0.8 4,138,400 + Echvi_3493 0.20 +0.6 4,138,400 + Echvi_3493 0.20 +1.4 4,138,401 - Echvi_3493 0.20 +1.1 4,138,401 - Echvi_3493 0.20 +0.4 4,138,451 + Echvi_3493 0.24 +0.0 4,138,452 - Echvi_3493 0.24 +0.6 4,138,488 + Echvi_3493 0.27 -0.2 4,138,488 + Echvi_3493 0.27 -0.7 4,138,489 - Echvi_3493 0.27 -1.2 4,138,489 - Echvi_3493 0.27 +1.7 4,138,489 - Echvi_3493 0.27 -0.9 4,138,489 - Echvi_3493 0.27 -0.7 4,138,489 - Echvi_3493 0.27 +0.1 4,138,532 - Echvi_3493 0.30 +0.1 4,138,574 - Echvi_3493 0.33 +0.2 4,138,586 + Echvi_3493 0.33 +0.7 4,138,590 - Echvi_3493 0.34 +0.4 4,138,590 - Echvi_3493 0.34 -0.2 4,138,590 - Echvi_3493 0.34 -1.4 4,138,592 + Echvi_3493 0.34 -1.5 4,138,593 - Echvi_3493 0.34 -1.1 4,138,610 + Echvi_3493 0.35 -0.2 4,138,610 + Echvi_3493 0.35 +1.2 4,138,610 + Echvi_3493 0.35 +0.1 4,138,610 + Echvi_3493 0.35 -0.6 4,138,610 + Echvi_3493 0.35 -0.3 4,138,611 - Echvi_3493 0.35 +0.8 4,138,611 - Echvi_3493 0.35 +0.3 4,138,611 - Echvi_3493 0.35 -1.5 4,138,611 - Echvi_3493 0.35 -0.6 4,138,615 - Echvi_3493 0.36 +0.1 4,138,625 - Echvi_3493 0.36 +3.0 4,138,635 - Echvi_3493 0.37 +0.6 4,138,683 + Echvi_3493 0.40 -0.2 4,138,683 + Echvi_3493 0.40 -2.8 4,138,683 + Echvi_3493 0.40 +0.2 4,138,684 - Echvi_3493 0.40 +1.6 4,138,712 + Echvi_3493 0.42 +0.2 4,138,716 + Echvi_3493 0.43 -0.3 4,138,717 - Echvi_3493 0.43 +0.5 4,138,801 - Echvi_3493 0.49 +0.6 4,138,833 - Echvi_3493 0.51 +2.2 4,138,844 + Echvi_3493 0.52 -0.9 4,138,979 + Echvi_3493 0.61 +0.5 4,138,980 - Echvi_3493 0.61 +1.8 4,138,980 - Echvi_3493 0.61 +0.1 4,139,015 + Echvi_3493 0.64 -0.3 4,139,050 + Echvi_3493 0.66 +0.1
Or see this region's nucleotide sequence