Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3162 and Echvi_3163 are separated by 2 nucleotides Echvi_3163 and Echvi_3164 are separated by 40 nucleotides Echvi_3164 and Echvi_3165 are separated by 15 nucleotides
Echvi_3162: Echvi_3162 - Universal stress protein UspA and related nucleotide-binding proteins, at 3,768,764 to 3,769,594
_3162
Echvi_3163: Echvi_3163 - Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains, at 3,769,597 to 3,770,442
_3163
Echvi_3164: Echvi_3164 - hypothetical protein, at 3,770,483 to 3,770,737
_3164
Echvi_3165: Echvi_3165 - Predicted exonuclease of the beta-lactamase fold involved in RNA processing, at 3,770,753 to 3,772,129
_3165
Position (kb)
3770
3771 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3769.508 kb on - strand, within Echvi_3162 at 3769.525 kb on - strand at 3769.576 kb on - strand at 3769.583 kb on - strand at 3769.739 kb on - strand, within Echvi_3163 at 3769.739 kb on - strand, within Echvi_3163 at 3769.789 kb on - strand, within Echvi_3163 at 3769.820 kb on - strand, within Echvi_3163 at 3769.909 kb on - strand, within Echvi_3163 at 3769.927 kb on - strand, within Echvi_3163 at 3769.965 kb on - strand, within Echvi_3163 at 3769.990 kb on + strand, within Echvi_3163 at 3769.990 kb on + strand, within Echvi_3163 at 3769.991 kb on - strand, within Echvi_3163 at 3769.992 kb on + strand, within Echvi_3163 at 3769.992 kb on + strand, within Echvi_3163 at 3769.993 kb on - strand, within Echvi_3163 at 3770.008 kb on + strand, within Echvi_3163 at 3770.035 kb on - strand, within Echvi_3163 at 3770.051 kb on + strand, within Echvi_3163 at 3770.052 kb on - strand, within Echvi_3163 at 3770.052 kb on - strand, within Echvi_3163 at 3770.052 kb on - strand, within Echvi_3163 at 3770.053 kb on + strand, within Echvi_3163 at 3770.054 kb on - strand, within Echvi_3163 at 3770.054 kb on - strand, within Echvi_3163 at 3770.054 kb on - strand, within Echvi_3163 at 3770.054 kb on - strand, within Echvi_3163 at 3770.054 kb on - strand, within Echvi_3163 at 3770.054 kb on - strand, within Echvi_3163 at 3770.055 kb on + strand, within Echvi_3163 at 3770.056 kb on - strand, within Echvi_3163 at 3770.138 kb on - strand, within Echvi_3163 at 3770.138 kb on - strand, within Echvi_3163 at 3770.138 kb on - strand, within Echvi_3163 at 3770.138 kb on - strand, within Echvi_3163 at 3770.196 kb on + strand, within Echvi_3163 at 3770.243 kb on + strand, within Echvi_3163 at 3770.244 kb on - strand, within Echvi_3163 at 3770.244 kb on - strand, within Echvi_3163 at 3770.244 kb on - strand, within Echvi_3163 at 3770.244 kb on - strand, within Echvi_3163 at 3770.244 kb on - strand, within Echvi_3163 at 3770.247 kb on + strand, within Echvi_3163 at 3770.247 kb on + strand, within Echvi_3163 at 3770.259 kb on - strand, within Echvi_3163 at 3770.259 kb on - strand, within Echvi_3163 at 3770.277 kb on - strand, within Echvi_3163 at 3770.335 kb on - strand, within Echvi_3163 at 3770.433 kb on - strand at 3770.577 kb on + strand, within Echvi_3164 at 3770.584 kb on - strand, within Echvi_3164 at 3770.586 kb on + strand, within Echvi_3164 at 3770.598 kb on + strand, within Echvi_3164 at 3770.598 kb on + strand, within Echvi_3164 at 3770.598 kb on + strand, within Echvi_3164 at 3770.599 kb on - strand, within Echvi_3164 at 3770.599 kb on - strand, within Echvi_3164 at 3770.605 kb on - strand, within Echvi_3164 at 3770.620 kb on + strand, within Echvi_3164 at 3770.636 kb on + strand, within Echvi_3164 at 3770.638 kb on + strand, within Echvi_3164 at 3770.639 kb on - strand, within Echvi_3164 at 3770.836 kb on + strand at 3770.837 kb on - strand at 3770.845 kb on - strand at 3770.972 kb on + strand, within Echvi_3165 at 3770.973 kb on - strand, within Echvi_3165 at 3771.062 kb on - strand, within Echvi_3165 at 3771.173 kb on + strand, within Echvi_3165 at 3771.174 kb on - strand, within Echvi_3165 at 3771.174 kb on - strand, within Echvi_3165 at 3771.266 kb on + strand, within Echvi_3165 at 3771.266 kb on + strand, within Echvi_3165 at 3771.267 kb on - strand, within Echvi_3165 at 3771.267 kb on - strand, within Echvi_3165 at 3771.267 kb on - strand, within Echvi_3165 at 3771.280 kb on + strand, within Echvi_3165 at 3771.280 kb on + strand, within Echvi_3165 at 3771.281 kb on - strand, within Echvi_3165 at 3771.281 kb on - strand, within Echvi_3165 at 3771.282 kb on + strand, within Echvi_3165 at 3771.283 kb on - strand, within Echvi_3165 at 3771.283 kb on - strand, within Echvi_3165 at 3771.334 kb on - strand, within Echvi_3165 at 3771.334 kb on - strand, within Echvi_3165 at 3771.337 kb on - strand, within Echvi_3165 at 3771.372 kb on + strand, within Echvi_3165 at 3771.373 kb on - strand, within Echvi_3165 at 3771.375 kb on + strand, within Echvi_3165 at 3771.375 kb on + strand, within Echvi_3165 at 3771.376 kb on - strand, within Echvi_3165 at 3771.376 kb on - strand, within Echvi_3165 at 3771.379 kb on + strand, within Echvi_3165 at 3771.392 kb on + strand, within Echvi_3165 at 3771.421 kb on - strand, within Echvi_3165 at 3771.577 kb on - strand, within Echvi_3165 at 3771.619 kb on + strand, within Echvi_3165 at 3771.619 kb on + strand, within Echvi_3165 at 3771.619 kb on + strand, within Echvi_3165 at 3771.620 kb on - strand, within Echvi_3165 at 3771.620 kb on - strand, within Echvi_3165 at 3771.620 kb on - strand, within Echvi_3165 at 3771.679 kb on + strand, within Echvi_3165 at 3771.680 kb on - strand, within Echvi_3165 at 3771.695 kb on + strand, within Echvi_3165 at 3771.695 kb on + strand, within Echvi_3165 at 3771.714 kb on + strand, within Echvi_3165 at 3771.715 kb on - strand, within Echvi_3165
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 3,769,508 - Echvi_3162 0.90 -0.5 3,769,525 - -0.1 3,769,576 - +0.2 3,769,583 - +1.0 3,769,739 - Echvi_3163 0.17 +0.2 3,769,739 - Echvi_3163 0.17 -0.6 3,769,789 - Echvi_3163 0.23 -0.2 3,769,820 - Echvi_3163 0.26 -0.7 3,769,909 - Echvi_3163 0.37 -0.1 3,769,927 - Echvi_3163 0.39 -1.3 3,769,965 - Echvi_3163 0.43 -1.1 3,769,990 + Echvi_3163 0.46 +0.0 3,769,990 + Echvi_3163 0.46 -0.6 3,769,991 - Echvi_3163 0.47 +1.5 3,769,992 + Echvi_3163 0.47 +0.4 3,769,992 + Echvi_3163 0.47 -1.3 3,769,993 - Echvi_3163 0.47 -0.1 3,770,008 + Echvi_3163 0.49 +0.5 3,770,035 - Echvi_3163 0.52 -0.1 3,770,051 + Echvi_3163 0.54 +1.0 3,770,052 - Echvi_3163 0.54 -1.2 3,770,052 - Echvi_3163 0.54 +0.4 3,770,052 - Echvi_3163 0.54 -0.0 3,770,053 + Echvi_3163 0.54 +1.4 3,770,054 - Echvi_3163 0.54 -0.0 3,770,054 - Echvi_3163 0.54 -1.6 3,770,054 - Echvi_3163 0.54 +0.0 3,770,054 - Echvi_3163 0.54 +0.2 3,770,054 - Echvi_3163 0.54 -1.2 3,770,054 - Echvi_3163 0.54 +0.5 3,770,055 + Echvi_3163 0.54 +3.7 3,770,056 - Echvi_3163 0.54 -1.8 3,770,138 - Echvi_3163 0.64 +1.6 3,770,138 - Echvi_3163 0.64 +0.2 3,770,138 - Echvi_3163 0.64 +2.2 3,770,138 - Echvi_3163 0.64 +0.7 3,770,196 + Echvi_3163 0.71 +0.2 3,770,243 + Echvi_3163 0.76 +0.6 3,770,244 - Echvi_3163 0.76 -0.4 3,770,244 - Echvi_3163 0.76 -0.5 3,770,244 - Echvi_3163 0.76 +0.4 3,770,244 - Echvi_3163 0.76 -0.3 3,770,244 - Echvi_3163 0.76 -2.2 3,770,247 + Echvi_3163 0.77 -0.3 3,770,247 + Echvi_3163 0.77 +0.4 3,770,259 - Echvi_3163 0.78 -0.3 3,770,259 - Echvi_3163 0.78 -0.5 3,770,277 - Echvi_3163 0.80 -0.6 3,770,335 - Echvi_3163 0.87 +0.4 3,770,433 - -0.5 3,770,577 + Echvi_3164 0.37 -0.2 3,770,584 - Echvi_3164 0.40 -0.6 3,770,586 + Echvi_3164 0.40 +2.3 3,770,598 + Echvi_3164 0.45 +2.0 3,770,598 + Echvi_3164 0.45 -0.5 3,770,598 + Echvi_3164 0.45 +2.9 3,770,599 - Echvi_3164 0.45 +0.6 3,770,599 - Echvi_3164 0.45 +1.1 3,770,605 - Echvi_3164 0.48 +1.2 3,770,620 + Echvi_3164 0.54 +0.2 3,770,636 + Echvi_3164 0.60 -1.4 3,770,638 + Echvi_3164 0.61 +0.2 3,770,639 - Echvi_3164 0.61 +0.1 3,770,836 + +2.0 3,770,837 - -0.9 3,770,845 - -1.4 3,770,972 + Echvi_3165 0.16 -1.4 3,770,973 - Echvi_3165 0.16 -0.3 3,771,062 - Echvi_3165 0.22 +0.6 3,771,173 + Echvi_3165 0.31 +0.7 3,771,174 - Echvi_3165 0.31 +0.3 3,771,174 - Echvi_3165 0.31 +0.0 3,771,266 + Echvi_3165 0.37 +0.7 3,771,266 + Echvi_3165 0.37 -0.7 3,771,267 - Echvi_3165 0.37 -0.7 3,771,267 - Echvi_3165 0.37 +0.6 3,771,267 - Echvi_3165 0.37 -0.1 3,771,280 + Echvi_3165 0.38 -0.1 3,771,280 + Echvi_3165 0.38 -0.7 3,771,281 - Echvi_3165 0.38 +0.6 3,771,281 - Echvi_3165 0.38 +0.7 3,771,282 + Echvi_3165 0.38 +0.9 3,771,283 - Echvi_3165 0.38 +0.2 3,771,283 - Echvi_3165 0.38 -1.1 3,771,334 - Echvi_3165 0.42 +0.2 3,771,334 - Echvi_3165 0.42 +1.0 3,771,337 - Echvi_3165 0.42 +1.0 3,771,372 + Echvi_3165 0.45 +1.2 3,771,373 - Echvi_3165 0.45 -0.1 3,771,375 + Echvi_3165 0.45 +0.4 3,771,375 + Echvi_3165 0.45 -0.6 3,771,376 - Echvi_3165 0.45 +1.3 3,771,376 - Echvi_3165 0.45 -1.3 3,771,379 + Echvi_3165 0.45 -1.0 3,771,392 + Echvi_3165 0.46 -0.3 3,771,421 - Echvi_3165 0.49 +0.9 3,771,577 - Echvi_3165 0.60 +0.7 3,771,619 + Echvi_3165 0.63 +0.1 3,771,619 + Echvi_3165 0.63 -0.2 3,771,619 + Echvi_3165 0.63 -0.5 3,771,620 - Echvi_3165 0.63 -0.8 3,771,620 - Echvi_3165 0.63 -3.1 3,771,620 - Echvi_3165 0.63 +0.9 3,771,679 + Echvi_3165 0.67 -0.3 3,771,680 - Echvi_3165 0.67 +2.3 3,771,695 + Echvi_3165 0.68 +0.4 3,771,695 + Echvi_3165 0.68 +0.6 3,771,714 + Echvi_3165 0.70 -0.7 3,771,715 - Echvi_3165 0.70 +1.1
Or see this region's nucleotide sequence