Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2339 and Echvi_2340 are separated by 121 nucleotides Echvi_2340 and Echvi_2341 are separated by 226 nucleotides
Echvi_2339: Echvi_2339 - Cytochrome bd-type quinol oxidase, subunit 1, at 2,775,800 to 2,777,125
_2339
Echvi_2340: Echvi_2340 - Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II, at 2,777,247 to 2,778,335
_2340
Echvi_2341: Echvi_2341 - naphthoate synthase (dihydroxynaphthoic acid synthetase), at 2,778,562 to 2,779,395
_2341
Position (kb)
2777
2778
2779 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2776.452 kb on - strand, within Echvi_2339 at 2776.495 kb on + strand, within Echvi_2339 at 2776.496 kb on - strand, within Echvi_2339 at 2776.517 kb on - strand, within Echvi_2339 at 2776.517 kb on - strand, within Echvi_2339 at 2776.642 kb on - strand, within Echvi_2339 at 2776.737 kb on - strand, within Echvi_2339 at 2776.786 kb on - strand, within Echvi_2339 at 2777.134 kb on - strand at 2777.162 kb on + strand at 2777.175 kb on - strand at 2777.203 kb on - strand at 2777.214 kb on - strand at 2777.275 kb on - strand at 2778.362 kb on + strand at 2778.430 kb on + strand at 2778.430 kb on + strand at 2778.431 kb on - strand at 2778.444 kb on + strand at 2778.466 kb on - strand at 2778.519 kb on + strand at 2778.520 kb on - strand at 2778.528 kb on + strand at 2778.528 kb on + strand at 2778.529 kb on - strand at 2778.533 kb on - strand at 2778.533 kb on - strand at 2778.537 kb on + strand at 2778.538 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 2,776,452 - Echvi_2339 0.49 -1.0 2,776,495 + Echvi_2339 0.52 -2.4 2,776,496 - Echvi_2339 0.52 +0.6 2,776,517 - Echvi_2339 0.54 -0.0 2,776,517 - Echvi_2339 0.54 -1.5 2,776,642 - Echvi_2339 0.63 +0.5 2,776,737 - Echvi_2339 0.71 +0.1 2,776,786 - Echvi_2339 0.74 -1.9 2,777,134 - -0.2 2,777,162 + -0.4 2,777,175 - -0.0 2,777,203 - +0.1 2,777,214 - -0.5 2,777,275 - +1.8 2,778,362 + +1.1 2,778,430 + +0.1 2,778,430 + -0.4 2,778,431 - +0.3 2,778,444 + +0.3 2,778,466 - +0.2 2,778,519 + +0.2 2,778,520 - +0.1 2,778,528 + +1.2 2,778,528 + -0.9 2,778,529 - +0.1 2,778,533 - +0.9 2,778,533 - +0.5 2,778,537 + -1.1 2,778,538 - -1.1
Or see this region's nucleotide sequence