Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1450 and Echvi_1451 are separated by 220 nucleotides Echvi_1451 and Echvi_1452 are separated by 80 nucleotides
Echvi_1450: Echvi_1450 - 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases, at 1,662,916 to 1,664,271
_1450
Echvi_1451: Echvi_1451 - Predicted membrane protein, at 1,664,492 to 1,664,911
_1451
Echvi_1452: Echvi_1452 - dTDP-glucose pyrophosphorylase, at 1,664,992 to 1,665,894
_1452
Position (kb)
1664
1665 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1663.494 kb on + strand, within Echvi_1450 at 1663.494 kb on + strand, within Echvi_1450 at 1663.495 kb on - strand, within Echvi_1450 at 1663.567 kb on - strand, within Echvi_1450 at 1663.572 kb on - strand, within Echvi_1450 at 1663.584 kb on + strand, within Echvi_1450 at 1663.593 kb on + strand, within Echvi_1450 at 1663.686 kb on + strand, within Echvi_1450 at 1663.694 kb on - strand, within Echvi_1450 at 1663.914 kb on + strand, within Echvi_1450 at 1663.915 kb on - strand, within Echvi_1450 at 1663.915 kb on - strand, within Echvi_1450 at 1664.042 kb on + strand, within Echvi_1450 at 1664.043 kb on - strand, within Echvi_1450 at 1664.043 kb on - strand, within Echvi_1450 at 1664.046 kb on + strand, within Echvi_1450 at 1664.101 kb on + strand, within Echvi_1450 at 1664.102 kb on - strand, within Echvi_1450 at 1664.102 kb on - strand, within Echvi_1450 at 1664.102 kb on - strand, within Echvi_1450 at 1664.106 kb on + strand, within Echvi_1450 at 1664.106 kb on + strand, within Echvi_1450 at 1664.125 kb on - strand, within Echvi_1450 at 1664.125 kb on - strand, within Echvi_1450 at 1664.238 kb on + strand at 1664.295 kb on + strand at 1664.301 kb on + strand at 1664.373 kb on + strand at 1664.387 kb on - strand at 1664.387 kb on - strand at 1664.409 kb on + strand at 1664.440 kb on + strand at 1664.441 kb on - strand at 1664.441 kb on - strand at 1664.441 kb on - strand at 1664.456 kb on - strand at 1664.536 kb on + strand, within Echvi_1451 at 1664.733 kb on - strand, within Echvi_1451 at 1664.744 kb on + strand, within Echvi_1451 at 1664.744 kb on + strand, within Echvi_1451 at 1664.745 kb on - strand, within Echvi_1451 at 1664.757 kb on - strand, within Echvi_1451 at 1664.757 kb on - strand, within Echvi_1451 at 1664.764 kb on + strand, within Echvi_1451 at 1664.852 kb on + strand, within Echvi_1451 at 1664.858 kb on + strand, within Echvi_1451 at 1664.859 kb on - strand, within Echvi_1451 at 1664.928 kb on + strand at 1664.939 kb on + strand at 1664.963 kb on + strand at 1664.968 kb on + strand at 1665.074 kb on + strand at 1665.117 kb on + strand, within Echvi_1452 at 1665.312 kb on + strand, within Echvi_1452 at 1665.360 kb on + strand, within Echvi_1452 at 1665.360 kb on + strand, within Echvi_1452 at 1665.366 kb on + strand, within Echvi_1452 at 1665.366 kb on + strand, within Echvi_1452 at 1665.366 kb on + strand, within Echvi_1452 at 1665.367 kb on - strand, within Echvi_1452 at 1665.403 kb on - strand, within Echvi_1452 at 1665.443 kb on + strand, within Echvi_1452 at 1665.453 kb on + strand, within Echvi_1452 at 1665.453 kb on + strand, within Echvi_1452 at 1665.453 kb on + strand, within Echvi_1452 at 1665.497 kb on - strand, within Echvi_1452 at 1665.521 kb on + strand, within Echvi_1452 at 1665.521 kb on + strand, within Echvi_1452 at 1665.754 kb on - strand, within Echvi_1452 at 1665.834 kb on + strand at 1665.869 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 1,663,494 + Echvi_1450 0.43 -2.2 1,663,494 + Echvi_1450 0.43 -2.8 1,663,495 - Echvi_1450 0.43 -1.5 1,663,567 - Echvi_1450 0.48 -1.8 1,663,572 - Echvi_1450 0.48 -1.3 1,663,584 + Echvi_1450 0.49 -3.0 1,663,593 + Echvi_1450 0.50 -1.8 1,663,686 + Echvi_1450 0.57 -2.5 1,663,694 - Echvi_1450 0.57 -3.4 1,663,914 + Echvi_1450 0.74 -0.6 1,663,915 - Echvi_1450 0.74 -1.3 1,663,915 - Echvi_1450 0.74 -0.1 1,664,042 + Echvi_1450 0.83 -3.2 1,664,043 - Echvi_1450 0.83 -1.6 1,664,043 - Echvi_1450 0.83 -1.6 1,664,046 + Echvi_1450 0.83 +0.8 1,664,101 + Echvi_1450 0.87 +1.5 1,664,102 - Echvi_1450 0.87 -0.3 1,664,102 - Echvi_1450 0.87 -2.4 1,664,102 - Echvi_1450 0.87 -0.3 1,664,106 + Echvi_1450 0.88 -0.1 1,664,106 + Echvi_1450 0.88 -0.9 1,664,125 - Echvi_1450 0.89 -3.2 1,664,125 - Echvi_1450 0.89 -2.4 1,664,238 + -0.7 1,664,295 + -1.0 1,664,301 + -1.3 1,664,373 + +1.4 1,664,387 - -1.0 1,664,387 - -0.2 1,664,409 + -0.7 1,664,440 + +0.1 1,664,441 - -0.8 1,664,441 - -0.4 1,664,441 - +0.5 1,664,456 - -0.1 1,664,536 + Echvi_1451 0.10 +0.4 1,664,733 - Echvi_1451 0.57 -1.4 1,664,744 + Echvi_1451 0.60 -0.1 1,664,744 + Echvi_1451 0.60 -0.1 1,664,745 - Echvi_1451 0.60 -1.4 1,664,757 - Echvi_1451 0.63 +0.8 1,664,757 - Echvi_1451 0.63 +0.7 1,664,764 + Echvi_1451 0.65 +1.0 1,664,852 + Echvi_1451 0.86 -0.9 1,664,858 + Echvi_1451 0.87 -1.1 1,664,859 - Echvi_1451 0.87 -2.5 1,664,928 + +0.1 1,664,939 + -0.5 1,664,963 + -0.9 1,664,968 + -1.5 1,665,074 + +0.6 1,665,117 + Echvi_1452 0.14 -0.0 1,665,312 + Echvi_1452 0.35 -0.5 1,665,360 + Echvi_1452 0.41 -0.8 1,665,360 + Echvi_1452 0.41 -0.2 1,665,366 + Echvi_1452 0.41 -3.0 1,665,366 + Echvi_1452 0.41 +0.8 1,665,366 + Echvi_1452 0.41 -2.4 1,665,367 - Echvi_1452 0.42 -0.3 1,665,403 - Echvi_1452 0.46 -1.9 1,665,443 + Echvi_1452 0.50 -1.6 1,665,453 + Echvi_1452 0.51 -1.2 1,665,453 + Echvi_1452 0.51 -2.5 1,665,453 + Echvi_1452 0.51 +0.5 1,665,497 - Echvi_1452 0.56 +0.1 1,665,521 + Echvi_1452 0.59 +1.0 1,665,521 + Echvi_1452 0.59 +0.9 1,665,754 - Echvi_1452 0.84 -1.8 1,665,834 + -2.1 1,665,869 - -0.6
Or see this region's nucleotide sequence