Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1065 and Echvi_1066 are separated by 30 nucleotides Echvi_1066 and Echvi_1067 are separated by 70 nucleotides Echvi_1067 and Echvi_1068 are separated by 418 nucleotides Echvi_1068 and Echvi_1069 are separated by 145 nucleotides
Echvi_1065: Echvi_1065 - hypothetical protein, at 1,225,935 to 1,226,375
_1065
Echvi_1066: Echvi_1066 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 1,226,406 to 1,226,981
_1066
Echvi_1067: Echvi_1067 - Acyl carrier protein phosphodiesterase, at 1,227,052 to 1,227,675
_1067
Echvi_1068: Echvi_1068 - Transcriptional regulators, at 1,228,094 to 1,228,519
_1068
Echvi_1069: Echvi_1069 - 3-hydroxyacyl-CoA dehydrogenase, at 1,228,665 to 1,231,070
_1069
Position (kb)
1227
1228 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1226.063 kb on - strand, within Echvi_1065 at 1226.069 kb on + strand, within Echvi_1065 at 1226.069 kb on + strand, within Echvi_1065 at 1226.070 kb on - strand, within Echvi_1065 at 1226.073 kb on + strand, within Echvi_1065 at 1226.074 kb on - strand, within Echvi_1065 at 1226.074 kb on - strand, within Echvi_1065 at 1226.095 kb on - strand, within Echvi_1065 at 1226.095 kb on - strand, within Echvi_1065 at 1226.188 kb on + strand, within Echvi_1065 at 1226.331 kb on + strand, within Echvi_1065 at 1226.331 kb on + strand, within Echvi_1065 at 1226.331 kb on + strand, within Echvi_1065 at 1226.332 kb on - strand at 1226.332 kb on - strand at 1226.333 kb on + strand at 1226.382 kb on + strand at 1226.383 kb on - strand at 1226.426 kb on + strand at 1226.426 kb on + strand at 1226.426 kb on + strand at 1226.426 kb on + strand at 1226.427 kb on - strand at 1226.443 kb on + strand at 1226.444 kb on - strand at 1226.514 kb on + strand, within Echvi_1066 at 1226.514 kb on + strand, within Echvi_1066 at 1226.514 kb on + strand, within Echvi_1066 at 1226.514 kb on + strand, within Echvi_1066 at 1226.515 kb on - strand, within Echvi_1066 at 1226.553 kb on + strand, within Echvi_1066 at 1226.553 kb on + strand, within Echvi_1066 at 1226.553 kb on + strand, within Echvi_1066 at 1226.553 kb on + strand, within Echvi_1066 at 1226.554 kb on - strand, within Echvi_1066 at 1226.570 kb on - strand, within Echvi_1066 at 1226.570 kb on - strand, within Echvi_1066 at 1226.617 kb on - strand, within Echvi_1066 at 1226.643 kb on - strand, within Echvi_1066 at 1226.682 kb on + strand, within Echvi_1066 at 1226.705 kb on + strand, within Echvi_1066 at 1226.706 kb on - strand, within Echvi_1066 at 1226.710 kb on + strand, within Echvi_1066 at 1226.710 kb on + strand, within Echvi_1066 at 1226.711 kb on - strand, within Echvi_1066 at 1226.711 kb on - strand, within Echvi_1066 at 1226.711 kb on - strand, within Echvi_1066 at 1226.711 kb on - strand, within Echvi_1066 at 1226.711 kb on - strand, within Echvi_1066 at 1226.711 kb on - strand, within Echvi_1066 at 1226.711 kb on - strand, within Echvi_1066 at 1226.716 kb on + strand, within Echvi_1066 at 1226.716 kb on + strand, within Echvi_1066 at 1226.767 kb on + strand, within Echvi_1066 at 1226.767 kb on + strand, within Echvi_1066 at 1226.768 kb on - strand, within Echvi_1066 at 1226.768 kb on - strand, within Echvi_1066 at 1226.775 kb on + strand, within Echvi_1066 at 1226.799 kb on + strand, within Echvi_1066 at 1226.799 kb on + strand, within Echvi_1066 at 1226.799 kb on + strand, within Echvi_1066 at 1226.799 kb on + strand, within Echvi_1066 at 1226.799 kb on + strand, within Echvi_1066 at 1226.800 kb on - strand, within Echvi_1066 at 1226.800 kb on - strand, within Echvi_1066 at 1226.800 kb on - strand, within Echvi_1066 at 1226.822 kb on + strand, within Echvi_1066 at 1226.822 kb on + strand, within Echvi_1066 at 1226.823 kb on - strand, within Echvi_1066 at 1226.823 kb on - strand, within Echvi_1066 at 1226.823 kb on - strand, within Echvi_1066 at 1226.859 kb on + strand, within Echvi_1066 at 1226.860 kb on - strand, within Echvi_1066 at 1226.860 kb on - strand, within Echvi_1066 at 1226.860 kb on - strand, within Echvi_1066 at 1226.882 kb on - strand, within Echvi_1066 at 1226.910 kb on + strand, within Echvi_1066 at 1226.911 kb on - strand, within Echvi_1066 at 1226.925 kb on + strand at 1226.959 kb on + strand at 1226.979 kb on + strand at 1226.980 kb on - strand at 1226.989 kb on - strand at 1227.031 kb on - strand at 1227.031 kb on - strand at 1227.031 kb on - strand at 1227.031 kb on - strand at 1227.031 kb on - strand at 1227.031 kb on - strand at 1227.062 kb on + strand at 1227.084 kb on + strand at 1227.168 kb on + strand, within Echvi_1067 at 1227.169 kb on - strand, within Echvi_1067 at 1227.279 kb on - strand, within Echvi_1067 at 1227.279 kb on - strand, within Echvi_1067 at 1227.319 kb on + strand, within Echvi_1067 at 1227.320 kb on + strand, within Echvi_1067 at 1227.320 kb on - strand, within Echvi_1067 at 1227.340 kb on + strand, within Echvi_1067 at 1227.340 kb on + strand, within Echvi_1067 at 1227.340 kb on + strand, within Echvi_1067 at 1227.341 kb on - strand, within Echvi_1067 at 1227.341 kb on - strand, within Echvi_1067 at 1227.341 kb on - strand, within Echvi_1067 at 1227.373 kb on + strand, within Echvi_1067 at 1227.373 kb on + strand, within Echvi_1067 at 1227.373 kb on + strand, within Echvi_1067 at 1227.374 kb on - strand, within Echvi_1067 at 1227.374 kb on - strand, within Echvi_1067 at 1227.375 kb on + strand, within Echvi_1067 at 1227.376 kb on - strand, within Echvi_1067 at 1227.439 kb on + strand, within Echvi_1067 at 1227.440 kb on - strand, within Echvi_1067 at 1227.440 kb on - strand, within Echvi_1067 at 1227.440 kb on - strand, within Echvi_1067 at 1227.470 kb on - strand, within Echvi_1067 at 1227.470 kb on - strand, within Echvi_1067 at 1227.470 kb on - strand, within Echvi_1067 at 1227.493 kb on - strand, within Echvi_1067 at 1227.525 kb on + strand, within Echvi_1067 at 1227.525 kb on + strand, within Echvi_1067 at 1227.525 kb on + strand, within Echvi_1067 at 1227.526 kb on - strand, within Echvi_1067 at 1227.526 kb on - strand, within Echvi_1067 at 1227.526 kb on - strand, within Echvi_1067 at 1227.544 kb on + strand, within Echvi_1067 at 1227.544 kb on + strand, within Echvi_1067 at 1227.575 kb on + strand, within Echvi_1067 at 1227.576 kb on - strand, within Echvi_1067 at 1227.591 kb on + strand, within Echvi_1067 at 1227.626 kb on + strand at 1227.651 kb on - strand at 1227.651 kb on - strand at 1227.698 kb on - strand at 1227.701 kb on - strand at 1227.760 kb on + strand at 1227.780 kb on + strand at 1227.780 kb on + strand at 1227.780 kb on + strand at 1227.799 kb on + strand at 1227.800 kb on - strand at 1227.827 kb on + strand at 1227.836 kb on + strand at 1227.837 kb on - strand at 1227.845 kb on - strand at 1227.865 kb on + strand at 1227.865 kb on + strand at 1227.866 kb on - strand at 1227.866 kb on - strand at 1227.867 kb on + strand at 1227.867 kb on + strand at 1227.868 kb on - strand at 1227.875 kb on + strand at 1227.878 kb on + strand at 1227.878 kb on + strand at 1227.915 kb on - strand at 1227.948 kb on + strand at 1227.949 kb on - strand at 1227.949 kb on - strand at 1227.949 kb on - strand at 1227.955 kb on + strand at 1227.955 kb on + strand at 1227.956 kb on - strand at 1227.959 kb on + strand at 1227.959 kb on + strand at 1227.969 kb on + strand at 1227.995 kb on - strand at 1228.030 kb on - strand at 1228.042 kb on + strand at 1228.050 kb on + strand at 1228.057 kb on - strand at 1228.061 kb on + strand at 1228.062 kb on - strand at 1228.062 kb on - strand at 1228.071 kb on + strand at 1228.071 kb on + strand at 1228.071 kb on + strand at 1228.071 kb on + strand at 1228.071 kb on + strand at 1228.071 kb on + strand at 1228.071 kb on + strand at 1228.072 kb on - strand at 1228.072 kb on - strand at 1228.072 kb on - strand at 1228.072 kb on - strand at 1228.075 kb on - strand at 1228.157 kb on + strand, within Echvi_1068 at 1228.158 kb on - strand, within Echvi_1068 at 1228.158 kb on - strand, within Echvi_1068 at 1228.189 kb on + strand, within Echvi_1068 at 1228.189 kb on + strand, within Echvi_1068 at 1228.196 kb on - strand, within Echvi_1068 at 1228.243 kb on + strand, within Echvi_1068 at 1228.244 kb on - strand, within Echvi_1068 at 1228.246 kb on + strand, within Echvi_1068 at 1228.246 kb on + strand, within Echvi_1068 at 1228.246 kb on + strand, within Echvi_1068 at 1228.247 kb on - strand, within Echvi_1068 at 1228.247 kb on - strand, within Echvi_1068 at 1228.247 kb on - strand, within Echvi_1068 at 1228.247 kb on - strand, within Echvi_1068 at 1228.247 kb on - strand, within Echvi_1068 at 1228.252 kb on - strand, within Echvi_1068 at 1228.348 kb on + strand, within Echvi_1068 at 1228.349 kb on - strand, within Echvi_1068 at 1228.427 kb on - strand, within Echvi_1068 at 1228.468 kb on + strand, within Echvi_1068 at 1228.469 kb on - strand, within Echvi_1068 at 1228.469 kb on - strand, within Echvi_1068 at 1228.518 kb on - strand at 1228.554 kb on + strand at 1228.554 kb on + strand at 1228.555 kb on - strand at 1228.560 kb on - strand at 1228.572 kb on + strand at 1228.572 kb on + strand at 1228.572 kb on + strand at 1228.573 kb on - strand at 1228.573 kb on - strand at 1228.575 kb on - strand at 1228.575 kb on - strand at 1228.575 kb on - strand at 1228.575 kb on - strand at 1228.590 kb on + strand at 1228.647 kb on + strand at 1228.648 kb on - strand at 1228.648 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 1,226,063 - Echvi_1065 0.29 -1.1 1,226,069 + Echvi_1065 0.30 -0.1 1,226,069 + Echvi_1065 0.30 -0.6 1,226,070 - Echvi_1065 0.31 +1.8 1,226,073 + Echvi_1065 0.31 +0.4 1,226,074 - Echvi_1065 0.32 -0.1 1,226,074 - Echvi_1065 0.32 +2.2 1,226,095 - Echvi_1065 0.36 -0.2 1,226,095 - Echvi_1065 0.36 -1.2 1,226,188 + Echvi_1065 0.57 -1.0 1,226,331 + Echvi_1065 0.90 +0.9 1,226,331 + Echvi_1065 0.90 -0.7 1,226,331 + Echvi_1065 0.90 -0.9 1,226,332 - +1.2 1,226,332 - -0.8 1,226,333 + -0.3 1,226,382 + -0.6 1,226,383 - +0.2 1,226,426 + -1.2 1,226,426 + -1.5 1,226,426 + -0.1 1,226,426 + +0.9 1,226,427 - -0.5 1,226,443 + +0.6 1,226,444 - -2.0 1,226,514 + Echvi_1066 0.19 -0.5 1,226,514 + Echvi_1066 0.19 -0.4 1,226,514 + Echvi_1066 0.19 +1.9 1,226,514 + Echvi_1066 0.19 +1.0 1,226,515 - Echvi_1066 0.19 +0.4 1,226,553 + Echvi_1066 0.26 +0.9 1,226,553 + Echvi_1066 0.26 +2.1 1,226,553 + Echvi_1066 0.26 -0.4 1,226,553 + Echvi_1066 0.26 -0.7 1,226,554 - Echvi_1066 0.26 -0.7 1,226,570 - Echvi_1066 0.28 -0.9 1,226,570 - Echvi_1066 0.28 -1.9 1,226,617 - Echvi_1066 0.37 -0.2 1,226,643 - Echvi_1066 0.41 -1.0 1,226,682 + Echvi_1066 0.48 +0.4 1,226,705 + Echvi_1066 0.52 +0.1 1,226,706 - Echvi_1066 0.52 -0.5 1,226,710 + Echvi_1066 0.53 +1.0 1,226,710 + Echvi_1066 0.53 -1.1 1,226,711 - Echvi_1066 0.53 -0.5 1,226,711 - Echvi_1066 0.53 -1.5 1,226,711 - Echvi_1066 0.53 -1.6 1,226,711 - Echvi_1066 0.53 -0.9 1,226,711 - Echvi_1066 0.53 -0.3 1,226,711 - Echvi_1066 0.53 +0.3 1,226,711 - Echvi_1066 0.53 +0.2 1,226,716 + Echvi_1066 0.54 -1.5 1,226,716 + Echvi_1066 0.54 -0.4 1,226,767 + Echvi_1066 0.63 +0.7 1,226,767 + Echvi_1066 0.63 -2.0 1,226,768 - Echvi_1066 0.63 +0.8 1,226,768 - Echvi_1066 0.63 +0.4 1,226,775 + Echvi_1066 0.64 -1.3 1,226,799 + Echvi_1066 0.68 -1.8 1,226,799 + Echvi_1066 0.68 +1.4 1,226,799 + Echvi_1066 0.68 -1.6 1,226,799 + Echvi_1066 0.68 +0.1 1,226,799 + Echvi_1066 0.68 -0.6 1,226,800 - Echvi_1066 0.68 -0.0 1,226,800 - Echvi_1066 0.68 +1.7 1,226,800 - Echvi_1066 0.68 -0.5 1,226,822 + Echvi_1066 0.72 +0.2 1,226,822 + Echvi_1066 0.72 -0.8 1,226,823 - Echvi_1066 0.72 -0.5 1,226,823 - Echvi_1066 0.72 -2.2 1,226,823 - Echvi_1066 0.72 -2.5 1,226,859 + Echvi_1066 0.79 -0.6 1,226,860 - Echvi_1066 0.79 -0.4 1,226,860 - Echvi_1066 0.79 -0.2 1,226,860 - Echvi_1066 0.79 -0.1 1,226,882 - Echvi_1066 0.83 +1.7 1,226,910 + Echvi_1066 0.88 +0.7 1,226,911 - Echvi_1066 0.88 -0.1 1,226,925 + +0.2 1,226,959 + -0.1 1,226,979 + -2.5 1,226,980 - -0.2 1,226,989 - +0.0 1,227,031 - +0.7 1,227,031 - +0.0 1,227,031 - -0.4 1,227,031 - +0.5 1,227,031 - +0.9 1,227,031 - +1.7 1,227,062 + -0.4 1,227,084 + +0.2 1,227,168 + Echvi_1067 0.19 +0.7 1,227,169 - Echvi_1067 0.19 -1.2 1,227,279 - Echvi_1067 0.36 +1.6 1,227,279 - Echvi_1067 0.36 +1.0 1,227,319 + Echvi_1067 0.43 +1.8 1,227,320 + Echvi_1067 0.43 +0.2 1,227,320 - Echvi_1067 0.43 +0.5 1,227,340 + Echvi_1067 0.46 -0.3 1,227,340 + Echvi_1067 0.46 +1.1 1,227,340 + Echvi_1067 0.46 -0.9 1,227,341 - Echvi_1067 0.46 +1.0 1,227,341 - Echvi_1067 0.46 +1.0 1,227,341 - Echvi_1067 0.46 +1.5 1,227,373 + Echvi_1067 0.51 -0.1 1,227,373 + Echvi_1067 0.51 -0.2 1,227,373 + Echvi_1067 0.51 -1.2 1,227,374 - Echvi_1067 0.52 +1.6 1,227,374 - Echvi_1067 0.52 -1.1 1,227,375 + Echvi_1067 0.52 -1.2 1,227,376 - Echvi_1067 0.52 -2.7 1,227,439 + Echvi_1067 0.62 -2.2 1,227,440 - Echvi_1067 0.62 +1.1 1,227,440 - Echvi_1067 0.62 +0.0 1,227,440 - Echvi_1067 0.62 +0.3 1,227,470 - Echvi_1067 0.67 -0.6 1,227,470 - Echvi_1067 0.67 -0.4 1,227,470 - Echvi_1067 0.67 -0.3 1,227,493 - Echvi_1067 0.71 +0.9 1,227,525 + Echvi_1067 0.76 -0.5 1,227,525 + Echvi_1067 0.76 -1.1 1,227,525 + Echvi_1067 0.76 +1.2 1,227,526 - Echvi_1067 0.76 +0.8 1,227,526 - Echvi_1067 0.76 +0.1 1,227,526 - Echvi_1067 0.76 +0.2 1,227,544 + Echvi_1067 0.79 -0.2 1,227,544 + Echvi_1067 0.79 +0.5 1,227,575 + Echvi_1067 0.84 +0.8 1,227,576 - Echvi_1067 0.84 +0.1 1,227,591 + Echvi_1067 0.86 +0.4 1,227,626 + -0.0 1,227,651 - -1.2 1,227,651 - +1.4 1,227,698 - -0.4 1,227,701 - -1.2 1,227,760 + -0.1 1,227,780 + -2.0 1,227,780 + -0.8 1,227,780 + +0.4 1,227,799 + +1.0 1,227,800 - +0.9 1,227,827 + +0.4 1,227,836 + +0.4 1,227,837 - -0.5 1,227,845 - +1.0 1,227,865 + -0.3 1,227,865 + +0.3 1,227,866 - -1.5 1,227,866 - +0.4 1,227,867 + +2.4 1,227,867 + +0.9 1,227,868 - -0.7 1,227,875 + -0.3 1,227,878 + +0.2 1,227,878 + +0.4 1,227,915 - +1.4 1,227,948 + +0.4 1,227,949 - +1.4 1,227,949 - -0.7 1,227,949 - +1.4 1,227,955 + -0.3 1,227,955 + +1.9 1,227,956 - -1.4 1,227,959 + -1.6 1,227,959 + -1.9 1,227,969 + -1.4 1,227,995 - +0.4 1,228,030 - +0.4 1,228,042 + -0.6 1,228,050 + +0.9 1,228,057 - +0.3 1,228,061 + +1.2 1,228,062 - +0.3 1,228,062 - -0.2 1,228,071 + +0.9 1,228,071 + -0.4 1,228,071 + -0.6 1,228,071 + +1.2 1,228,071 + +0.8 1,228,071 + +1.8 1,228,071 + -1.4 1,228,072 - +1.5 1,228,072 - -0.6 1,228,072 - -1.1 1,228,072 - +0.1 1,228,075 - +1.3 1,228,157 + Echvi_1068 0.15 -1.0 1,228,158 - Echvi_1068 0.15 -2.9 1,228,158 - Echvi_1068 0.15 +0.5 1,228,189 + Echvi_1068 0.22 +0.4 1,228,189 + Echvi_1068 0.22 +0.7 1,228,196 - Echvi_1068 0.24 -1.6 1,228,243 + Echvi_1068 0.35 -0.3 1,228,244 - Echvi_1068 0.35 +0.1 1,228,246 + Echvi_1068 0.36 -1.1 1,228,246 + Echvi_1068 0.36 +0.9 1,228,246 + Echvi_1068 0.36 +0.3 1,228,247 - Echvi_1068 0.36 +0.0 1,228,247 - Echvi_1068 0.36 -0.0 1,228,247 - Echvi_1068 0.36 +0.0 1,228,247 - Echvi_1068 0.36 +1.1 1,228,247 - Echvi_1068 0.36 +1.2 1,228,252 - Echvi_1068 0.37 +0.5 1,228,348 + Echvi_1068 0.60 -0.1 1,228,349 - Echvi_1068 0.60 -2.1 1,228,427 - Echvi_1068 0.78 +0.9 1,228,468 + Echvi_1068 0.88 +1.7 1,228,469 - Echvi_1068 0.88 -1.4 1,228,469 - Echvi_1068 0.88 +0.2 1,228,518 - -0.8 1,228,554 + +1.1 1,228,554 + -0.1 1,228,555 - -0.9 1,228,560 - -0.5 1,228,572 + +0.5 1,228,572 + +0.4 1,228,572 + +1.4 1,228,573 - +0.7 1,228,573 - -2.1 1,228,575 - +0.3 1,228,575 - +0.4 1,228,575 - -0.5 1,228,575 - -0.7 1,228,590 + -0.4 1,228,647 + -0.2 1,228,648 - -2.3 1,228,648 - +0.8
Or see this region's nucleotide sequence