Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21370 and CA264_21375 are separated by 94 nucleotides CA264_21375 and CA264_21380 are separated by 11 nucleotides
CA264_21370: CA264_21370 - hypothetical protein, at 138,206 to 139,042
_21370
CA264_21375: CA264_21375 - hypothetical protein, at 139,137 to 139,643
_21375
CA264_21380: CA264_21380 - hypothetical protein, at 139,655 to 140,869
_21380
Position (kb)
139
140 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 138.200 kb on + strand at 138.201 kb on - strand at 138.201 kb on - strand at 138.201 kb on - strand at 138.220 kb on + strand at 138.237 kb on - strand at 138.268 kb on - strand at 138.273 kb on + strand at 138.281 kb on - strand at 138.281 kb on - strand at 138.311 kb on - strand, within CA264_21370 at 138.349 kb on + strand, within CA264_21370 at 138.350 kb on - strand, within CA264_21370 at 138.351 kb on + strand, within CA264_21370 at 138.355 kb on + strand, within CA264_21370 at 138.356 kb on - strand, within CA264_21370 at 138.396 kb on - strand, within CA264_21370 at 138.410 kb on + strand, within CA264_21370 at 138.410 kb on + strand, within CA264_21370 at 138.411 kb on - strand, within CA264_21370 at 138.411 kb on - strand, within CA264_21370 at 138.411 kb on - strand, within CA264_21370 at 138.411 kb on - strand, within CA264_21370 at 138.412 kb on + strand, within CA264_21370 at 138.505 kb on - strand, within CA264_21370 at 138.602 kb on + strand, within CA264_21370 at 138.604 kb on + strand, within CA264_21370 at 138.604 kb on + strand, within CA264_21370 at 138.607 kb on + strand, within CA264_21370 at 138.644 kb on + strand, within CA264_21370 at 138.698 kb on + strand, within CA264_21370 at 138.704 kb on - strand, within CA264_21370 at 138.716 kb on + strand, within CA264_21370 at 138.757 kb on - strand, within CA264_21370 at 138.815 kb on + strand, within CA264_21370 at 138.815 kb on + strand, within CA264_21370 at 138.816 kb on - strand, within CA264_21370 at 138.903 kb on + strand, within CA264_21370 at 138.915 kb on + strand, within CA264_21370 at 138.935 kb on + strand, within CA264_21370 at 138.935 kb on + strand, within CA264_21370 at 138.935 kb on + strand, within CA264_21370 at 138.936 kb on - strand, within CA264_21370 at 138.936 kb on - strand, within CA264_21370 at 138.938 kb on - strand, within CA264_21370 at 138.939 kb on + strand, within CA264_21370 at 138.939 kb on + strand, within CA264_21370 at 138.940 kb on - strand, within CA264_21370 at 138.940 kb on - strand, within CA264_21370 at 138.940 kb on - strand, within CA264_21370 at 138.940 kb on - strand, within CA264_21370 at 138.940 kb on - strand, within CA264_21370 at 138.940 kb on - strand, within CA264_21370 at 138.960 kb on - strand at 138.981 kb on + strand at 139.041 kb on - strand at 139.065 kb on - strand at 139.099 kb on - strand at 139.104 kb on - strand at 139.125 kb on + strand at 139.126 kb on - strand at 139.126 kb on - strand at 139.151 kb on + strand at 139.152 kb on - strand at 139.152 kb on - strand at 139.171 kb on + strand at 139.171 kb on + strand at 139.210 kb on - strand, within CA264_21375 at 139.215 kb on + strand, within CA264_21375 at 139.215 kb on + strand, within CA264_21375 at 139.216 kb on - strand, within CA264_21375 at 139.216 kb on - strand, within CA264_21375 at 139.236 kb on - strand, within CA264_21375 at 139.240 kb on - strand, within CA264_21375 at 139.285 kb on + strand, within CA264_21375 at 139.288 kb on + strand, within CA264_21375 at 139.288 kb on + strand, within CA264_21375 at 139.335 kb on + strand, within CA264_21375 at 139.336 kb on - strand, within CA264_21375 at 139.338 kb on - strand, within CA264_21375 at 139.338 kb on - strand, within CA264_21375 at 139.357 kb on - strand, within CA264_21375 at 139.384 kb on + strand, within CA264_21375 at 139.385 kb on - strand, within CA264_21375 at 139.393 kb on - strand, within CA264_21375 at 139.424 kb on + strand, within CA264_21375 at 139.448 kb on + strand, within CA264_21375 at 139.449 kb on - strand, within CA264_21375 at 139.484 kb on + strand, within CA264_21375 at 139.500 kb on + strand, within CA264_21375 at 139.501 kb on - strand, within CA264_21375 at 139.501 kb on - strand, within CA264_21375 at 139.501 kb on - strand, within CA264_21375 at 139.576 kb on - strand, within CA264_21375 at 139.635 kb on - strand at 139.818 kb on + strand, within CA264_21380 at 139.820 kb on + strand, within CA264_21380 at 139.822 kb on + strand, within CA264_21380 at 139.880 kb on + strand, within CA264_21380 at 140.062 kb on + strand, within CA264_21380 at 140.210 kb on + strand, within CA264_21380 at 140.314 kb on + strand, within CA264_21380 at 140.314 kb on + strand, within CA264_21380 at 140.418 kb on + strand, within CA264_21380
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 138,200 + +0.0 138,201 - +0.1 138,201 - -0.3 138,201 - -0.1 138,220 + -0.2 138,237 - +0.1 138,268 - -0.4 138,273 + +0.2 138,281 - -0.1 138,281 - -0.2 138,311 - CA264_21370 0.13 -0.3 138,349 + CA264_21370 0.17 +0.0 138,350 - CA264_21370 0.17 +0.2 138,351 + CA264_21370 0.17 +0.3 138,355 + CA264_21370 0.18 -0.0 138,356 - CA264_21370 0.18 +0.9 138,396 - CA264_21370 0.23 -0.0 138,410 + CA264_21370 0.24 -1.0 138,410 + CA264_21370 0.24 +0.1 138,411 - CA264_21370 0.24 -0.6 138,411 - CA264_21370 0.24 -0.5 138,411 - CA264_21370 0.24 -0.1 138,411 - CA264_21370 0.24 +0.4 138,412 + CA264_21370 0.25 -2.0 138,505 - CA264_21370 0.36 +1.5 138,602 + CA264_21370 0.47 +0.1 138,604 + CA264_21370 0.48 +0.2 138,604 + CA264_21370 0.48 -0.7 138,607 + CA264_21370 0.48 -0.1 138,644 + CA264_21370 0.52 -0.1 138,698 + CA264_21370 0.59 -0.2 138,704 - CA264_21370 0.59 +0.0 138,716 + CA264_21370 0.61 +0.2 138,757 - CA264_21370 0.66 -0.1 138,815 + CA264_21370 0.73 +0.1 138,815 + CA264_21370 0.73 -1.1 138,816 - CA264_21370 0.73 -0.5 138,903 + CA264_21370 0.83 -0.3 138,915 + CA264_21370 0.85 +0.5 138,935 + CA264_21370 0.87 +0.4 138,935 + CA264_21370 0.87 +0.1 138,935 + CA264_21370 0.87 -0.5 138,936 - CA264_21370 0.87 -0.4 138,936 - CA264_21370 0.87 -0.1 138,938 - CA264_21370 0.87 +1.1 138,939 + CA264_21370 0.88 +0.1 138,939 + CA264_21370 0.88 +0.4 138,940 - CA264_21370 0.88 -0.7 138,940 - CA264_21370 0.88 -0.2 138,940 - CA264_21370 0.88 +0.4 138,940 - CA264_21370 0.88 -0.1 138,940 - CA264_21370 0.88 -0.4 138,940 - CA264_21370 0.88 +1.1 138,960 - +0.4 138,981 + -0.4 139,041 - -0.9 139,065 - +0.5 139,099 - -0.5 139,104 - -0.4 139,125 + -0.2 139,126 - -0.1 139,126 - +1.8 139,151 + -0.2 139,152 - +0.1 139,152 - +0.2 139,171 + +0.4 139,171 + -2.0 139,210 - CA264_21375 0.14 -0.5 139,215 + CA264_21375 0.15 -0.1 139,215 + CA264_21375 0.15 -0.1 139,216 - CA264_21375 0.16 +0.5 139,216 - CA264_21375 0.16 -1.2 139,236 - CA264_21375 0.20 -2.4 139,240 - CA264_21375 0.20 -0.1 139,285 + CA264_21375 0.29 +0.2 139,288 + CA264_21375 0.30 +0.4 139,288 + CA264_21375 0.30 -0.3 139,335 + CA264_21375 0.39 -0.5 139,336 - CA264_21375 0.39 -0.8 139,338 - CA264_21375 0.40 -0.3 139,338 - CA264_21375 0.40 -0.5 139,357 - CA264_21375 0.43 -2.3 139,384 + CA264_21375 0.49 -0.0 139,385 - CA264_21375 0.49 -1.0 139,393 - CA264_21375 0.50 +0.4 139,424 + CA264_21375 0.57 +0.9 139,448 + CA264_21375 0.61 +1.3 139,449 - CA264_21375 0.62 -0.5 139,484 + CA264_21375 0.68 -1.0 139,500 + CA264_21375 0.72 +1.4 139,501 - CA264_21375 0.72 -0.8 139,501 - CA264_21375 0.72 +0.0 139,501 - CA264_21375 0.72 -0.3 139,576 - CA264_21375 0.87 -0.2 139,635 - -0.4 139,818 + CA264_21380 0.13 -0.7 139,820 + CA264_21380 0.14 -1.7 139,822 + CA264_21380 0.14 -1.2 139,880 + CA264_21380 0.19 +0.3 140,062 + CA264_21380 0.33 +0.7 140,210 + CA264_21380 0.46 -0.3 140,314 + CA264_21380 0.54 -1.1 140,314 + CA264_21380 0.54 +0.5 140,418 + CA264_21380 0.63 +0.2
Or see this region's nucleotide sequence