Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20760 and CA264_20765 overlap by 13 nucleotides CA264_20765 and CA264_20770 are separated by 3 nucleotides CA264_20770 and CA264_20775 are separated by 93 nucleotides
CA264_20760: CA264_20760 - hypothetical protein, at 12,270 to 13,040
_20760
CA264_20765: CA264_20765 - hypothetical protein, at 13,028 to 13,789
_20765
CA264_20770: CA264_20770 - oxidoreductase, at 13,793 to 15,757
_20770
CA264_20775: CA264_20775 - hypothetical protein, at 15,851 to 16,450
_20775
Position (kb)
13
14
15
16 Strain fitness (log2 ratio)
-2
-1
0
1 at 12.876 kb on - strand, within CA264_20760 at 12.931 kb on - strand, within CA264_20760 at 12.931 kb on - strand, within CA264_20760 at 12.953 kb on + strand, within CA264_20760 at 12.954 kb on - strand, within CA264_20760 at 12.954 kb on - strand, within CA264_20760 at 12.956 kb on + strand, within CA264_20760 at 12.957 kb on - strand, within CA264_20760 at 12.957 kb on - strand, within CA264_20760 at 12.972 kb on - strand at 12.972 kb on - strand at 12.975 kb on - strand at 12.978 kb on + strand at 13.012 kb on - strand at 13.012 kb on - strand at 13.012 kb on - strand at 13.012 kb on - strand at 13.016 kb on + strand at 13.111 kb on + strand, within CA264_20765 at 13.119 kb on + strand, within CA264_20765 at 13.170 kb on + strand, within CA264_20765 at 13.202 kb on + strand, within CA264_20765 at 13.203 kb on - strand, within CA264_20765 at 13.264 kb on + strand, within CA264_20765 at 13.267 kb on + strand, within CA264_20765 at 13.267 kb on + strand, within CA264_20765 at 13.267 kb on + strand, within CA264_20765 at 13.268 kb on - strand, within CA264_20765 at 13.302 kb on + strand, within CA264_20765 at 13.302 kb on + strand, within CA264_20765 at 13.303 kb on - strand, within CA264_20765 at 13.354 kb on - strand, within CA264_20765 at 13.354 kb on - strand, within CA264_20765 at 13.354 kb on - strand, within CA264_20765 at 13.411 kb on - strand, within CA264_20765 at 13.422 kb on + strand, within CA264_20765 at 13.423 kb on - strand, within CA264_20765 at 13.446 kb on - strand, within CA264_20765 at 13.450 kb on + strand, within CA264_20765 at 13.523 kb on + strand, within CA264_20765 at 13.523 kb on + strand, within CA264_20765 at 13.524 kb on - strand, within CA264_20765 at 13.524 kb on - strand, within CA264_20765 at 13.524 kb on - strand, within CA264_20765 at 13.524 kb on - strand, within CA264_20765 at 13.524 kb on - strand, within CA264_20765 at 13.524 kb on - strand, within CA264_20765 at 13.525 kb on + strand, within CA264_20765 at 13.526 kb on - strand, within CA264_20765 at 13.543 kb on + strand, within CA264_20765 at 13.545 kb on + strand, within CA264_20765 at 13.545 kb on + strand, within CA264_20765 at 13.546 kb on - strand, within CA264_20765 at 13.546 kb on - strand, within CA264_20765 at 13.546 kb on - strand, within CA264_20765 at 13.560 kb on - strand, within CA264_20765 at 13.742 kb on - strand at 13.768 kb on + strand at 13.790 kb on - strand at 13.790 kb on - strand at 13.883 kb on + strand at 13.884 kb on - strand at 13.884 kb on - strand at 13.896 kb on - strand at 13.896 kb on - strand at 13.896 kb on - strand at 13.928 kb on - strand at 13.953 kb on + strand at 13.954 kb on - strand at 13.960 kb on + strand at 13.961 kb on - strand at 13.964 kb on + strand at 13.964 kb on + strand at 13.965 kb on - strand at 14.010 kb on - strand, within CA264_20770 at 14.041 kb on + strand, within CA264_20770 at 14.271 kb on - strand, within CA264_20770 at 14.273 kb on + strand, within CA264_20770 at 14.274 kb on - strand, within CA264_20770 at 14.274 kb on - strand, within CA264_20770 at 14.400 kb on + strand, within CA264_20770 at 14.401 kb on - strand, within CA264_20770 at 14.401 kb on - strand, within CA264_20770 at 14.405 kb on + strand, within CA264_20770 at 14.405 kb on + strand, within CA264_20770 at 14.425 kb on + strand, within CA264_20770 at 14.441 kb on - strand, within CA264_20770 at 14.447 kb on - strand, within CA264_20770 at 14.447 kb on - strand, within CA264_20770 at 14.612 kb on + strand, within CA264_20770 at 14.614 kb on + strand, within CA264_20770 at 14.615 kb on - strand, within CA264_20770 at 14.634 kb on + strand, within CA264_20770 at 14.683 kb on - strand, within CA264_20770 at 14.713 kb on + strand, within CA264_20770 at 14.714 kb on - strand, within CA264_20770 at 14.715 kb on + strand, within CA264_20770 at 14.716 kb on - strand, within CA264_20770 at 14.725 kb on + strand, within CA264_20770 at 14.759 kb on - strand, within CA264_20770 at 14.827 kb on + strand, within CA264_20770 at 14.913 kb on - strand, within CA264_20770 at 14.927 kb on - strand, within CA264_20770 at 15.096 kb on + strand, within CA264_20770 at 15.097 kb on - strand, within CA264_20770 at 15.097 kb on - strand, within CA264_20770 at 15.097 kb on - strand, within CA264_20770 at 15.142 kb on + strand, within CA264_20770 at 15.143 kb on - strand, within CA264_20770 at 15.148 kb on - strand, within CA264_20770 at 15.188 kb on + strand, within CA264_20770 at 15.188 kb on + strand, within CA264_20770 at 15.189 kb on - strand, within CA264_20770 at 15.199 kb on - strand, within CA264_20770 at 15.205 kb on + strand, within CA264_20770 at 15.239 kb on + strand, within CA264_20770 at 15.352 kb on - strand, within CA264_20770 at 15.432 kb on - strand, within CA264_20770 at 15.441 kb on - strand, within CA264_20770 at 15.492 kb on + strand, within CA264_20770 at 15.514 kb on + strand, within CA264_20770 at 15.659 kb on - strand at 15.708 kb on - strand at 15.737 kb on + strand at 15.822 kb on + strand at 15.829 kb on - strand at 15.852 kb on + strand at 15.852 kb on + strand at 15.853 kb on - strand at 15.853 kb on - strand at 15.856 kb on + strand at 15.889 kb on + strand at 15.890 kb on - strand at 15.905 kb on - strand at 15.916 kb on + strand, within CA264_20775 at 15.917 kb on - strand, within CA264_20775 at 15.917 kb on - strand, within CA264_20775 at 15.928 kb on + strand, within CA264_20775 at 15.983 kb on - strand, within CA264_20775 at 16.066 kb on + strand, within CA264_20775 at 16.066 kb on + strand, within CA264_20775 at 16.067 kb on - strand, within CA264_20775 at 16.087 kb on + strand, within CA264_20775 at 16.088 kb on - strand, within CA264_20775 at 16.088 kb on - strand, within CA264_20775 at 16.088 kb on - strand, within CA264_20775 at 16.144 kb on + strand, within CA264_20775 at 16.144 kb on + strand, within CA264_20775 at 16.145 kb on - strand, within CA264_20775 at 16.145 kb on - strand, within CA264_20775 at 16.207 kb on + strand, within CA264_20775 at 16.207 kb on + strand, within CA264_20775 at 16.208 kb on - strand, within CA264_20775 at 16.312 kb on + strand, within CA264_20775 at 16.312 kb on + strand, within CA264_20775 at 16.312 kb on + strand, within CA264_20775 at 16.313 kb on - strand, within CA264_20775 at 16.313 kb on - strand, within CA264_20775 at 16.365 kb on - strand, within CA264_20775 at 16.367 kb on - strand, within CA264_20775 at 16.396 kb on + strand at 16.397 kb on - strand at 16.430 kb on + strand at 16.431 kb on - strand at 16.453 kb on + strand at 16.453 kb on + strand at 16.462 kb on + strand at 16.525 kb on + strand at 16.526 kb on - strand at 16.526 kb on - strand at 16.548 kb on + strand at 16.549 kb on - strand at 16.552 kb on + strand at 16.553 kb on - strand at 16.553 kb on - strand at 16.553 kb on - strand at 16.557 kb on - strand at 16.592 kb on + strand at 16.641 kb on - strand at 16.670 kb on + strand at 16.670 kb on + strand at 16.670 kb on + strand at 16.686 kb on + strand at 16.686 kb on + strand at 16.697 kb on + strand at 16.698 kb on - strand at 16.734 kb on + strand at 16.734 kb on + strand at 16.735 kb on - strand at 16.735 kb on - strand at 16.735 kb on - strand at 16.735 kb on - strand at 16.741 kb on - strand at 16.745 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 12,876 - CA264_20760 0.79 -0.6 12,931 - CA264_20760 0.86 -0.0 12,931 - CA264_20760 0.86 -0.5 12,953 + CA264_20760 0.89 -0.3 12,954 - CA264_20760 0.89 -0.8 12,954 - CA264_20760 0.89 -0.6 12,956 + CA264_20760 0.89 +0.9 12,957 - CA264_20760 0.89 -0.4 12,957 - CA264_20760 0.89 +0.6 12,972 - -0.2 12,972 - -0.1 12,975 - -0.3 12,978 + +0.2 13,012 - -0.2 13,012 - -0.2 13,012 - -0.4 13,012 - +0.1 13,016 + -0.1 13,111 + CA264_20765 0.11 +0.8 13,119 + CA264_20765 0.12 -0.3 13,170 + CA264_20765 0.19 -0.2 13,202 + CA264_20765 0.23 -1.8 13,203 - CA264_20765 0.23 -0.6 13,264 + CA264_20765 0.31 -0.0 13,267 + CA264_20765 0.31 +0.1 13,267 + CA264_20765 0.31 -0.5 13,267 + CA264_20765 0.31 -1.1 13,268 - CA264_20765 0.31 -0.6 13,302 + CA264_20765 0.36 -0.6 13,302 + CA264_20765 0.36 -0.2 13,303 - CA264_20765 0.36 -0.4 13,354 - CA264_20765 0.43 -0.3 13,354 - CA264_20765 0.43 -1.2 13,354 - CA264_20765 0.43 -0.4 13,411 - CA264_20765 0.50 -0.2 13,422 + CA264_20765 0.52 +1.1 13,423 - CA264_20765 0.52 +1.3 13,446 - CA264_20765 0.55 -0.3 13,450 + CA264_20765 0.55 +0.3 13,523 + CA264_20765 0.65 +0.2 13,523 + CA264_20765 0.65 -0.7 13,524 - CA264_20765 0.65 -0.3 13,524 - CA264_20765 0.65 +0.5 13,524 - CA264_20765 0.65 +1.1 13,524 - CA264_20765 0.65 -0.4 13,524 - CA264_20765 0.65 -0.7 13,524 - CA264_20765 0.65 -1.4 13,525 + CA264_20765 0.65 -0.1 13,526 - CA264_20765 0.65 -0.7 13,543 + CA264_20765 0.68 -1.9 13,545 + CA264_20765 0.68 +0.7 13,545 + CA264_20765 0.68 +0.1 13,546 - CA264_20765 0.68 -0.0 13,546 - CA264_20765 0.68 +1.0 13,546 - CA264_20765 0.68 -0.7 13,560 - CA264_20765 0.70 -0.3 13,742 - -0.1 13,768 + +0.8 13,790 - -0.1 13,790 - -0.1 13,883 + +0.1 13,884 - +0.3 13,884 - -1.4 13,896 - -0.1 13,896 - -0.7 13,896 - -0.2 13,928 - -0.3 13,953 + +0.6 13,954 - -1.4 13,960 + -0.6 13,961 - +0.8 13,964 + +1.4 13,964 + +0.0 13,965 - -0.1 14,010 - CA264_20770 0.11 -0.2 14,041 + CA264_20770 0.13 -1.0 14,271 - CA264_20770 0.24 -0.8 14,273 + CA264_20770 0.24 +0.2 14,274 - CA264_20770 0.24 -0.3 14,274 - CA264_20770 0.24 -0.5 14,400 + CA264_20770 0.31 +0.8 14,401 - CA264_20770 0.31 -0.3 14,401 - CA264_20770 0.31 +0.4 14,405 + CA264_20770 0.31 +0.4 14,405 + CA264_20770 0.31 -0.7 14,425 + CA264_20770 0.32 -0.2 14,441 - CA264_20770 0.33 -2.3 14,447 - CA264_20770 0.33 -0.9 14,447 - CA264_20770 0.33 -0.6 14,612 + CA264_20770 0.42 +0.1 14,614 + CA264_20770 0.42 +0.3 14,615 - CA264_20770 0.42 -0.5 14,634 + CA264_20770 0.43 -0.0 14,683 - CA264_20770 0.45 +0.4 14,713 + CA264_20770 0.47 -0.0 14,714 - CA264_20770 0.47 -0.2 14,715 + CA264_20770 0.47 -0.2 14,716 - CA264_20770 0.47 +0.9 14,725 + CA264_20770 0.47 +0.4 14,759 - CA264_20770 0.49 -0.6 14,827 + CA264_20770 0.53 +0.6 14,913 - CA264_20770 0.57 -0.1 14,927 - CA264_20770 0.58 +0.1 15,096 + CA264_20770 0.66 +0.7 15,097 - CA264_20770 0.66 -0.2 15,097 - CA264_20770 0.66 -0.5 15,097 - CA264_20770 0.66 -0.5 15,142 + CA264_20770 0.69 +0.1 15,143 - CA264_20770 0.69 -0.3 15,148 - CA264_20770 0.69 -0.5 15,188 + CA264_20770 0.71 +0.1 15,188 + CA264_20770 0.71 -1.7 15,189 - CA264_20770 0.71 -0.6 15,199 - CA264_20770 0.72 +0.2 15,205 + CA264_20770 0.72 +1.0 15,239 + CA264_20770 0.74 +0.2 15,352 - CA264_20770 0.79 +0.4 15,432 - CA264_20770 0.83 -0.7 15,441 - CA264_20770 0.84 -0.7 15,492 + CA264_20770 0.86 +0.1 15,514 + CA264_20770 0.88 +0.5 15,659 - -0.7 15,708 - -0.1 15,737 + +0.9 15,822 + -1.2 15,829 - -0.3 15,852 + -0.5 15,852 + +0.1 15,853 - -0.3 15,853 - +0.1 15,856 + -0.0 15,889 + -0.5 15,890 - -0.7 15,905 - -0.9 15,916 + CA264_20775 0.11 +1.1 15,917 - CA264_20775 0.11 +0.7 15,917 - CA264_20775 0.11 +0.5 15,928 + CA264_20775 0.13 +0.5 15,983 - CA264_20775 0.22 -0.4 16,066 + CA264_20775 0.36 -0.7 16,066 + CA264_20775 0.36 -0.2 16,067 - CA264_20775 0.36 -0.3 16,087 + CA264_20775 0.39 +0.3 16,088 - CA264_20775 0.40 +0.1 16,088 - CA264_20775 0.40 +0.1 16,088 - CA264_20775 0.40 -0.0 16,144 + CA264_20775 0.49 +0.1 16,144 + CA264_20775 0.49 -0.9 16,145 - CA264_20775 0.49 -0.3 16,145 - CA264_20775 0.49 -0.4 16,207 + CA264_20775 0.59 -0.5 16,207 + CA264_20775 0.59 -0.3 16,208 - CA264_20775 0.59 -0.1 16,312 + CA264_20775 0.77 +0.1 16,312 + CA264_20775 0.77 -0.7 16,312 + CA264_20775 0.77 -0.0 16,313 - CA264_20775 0.77 -0.0 16,313 - CA264_20775 0.77 -0.5 16,365 - CA264_20775 0.86 -0.4 16,367 - CA264_20775 0.86 -0.5 16,396 + -0.4 16,397 - -0.2 16,430 + -0.1 16,431 - -1.1 16,453 + -0.2 16,453 + -0.4 16,462 + -0.0 16,525 + -1.5 16,526 - -1.2 16,526 - -0.3 16,548 + +0.2 16,549 - -0.3 16,552 + -0.9 16,553 - +0.4 16,553 - -1.9 16,553 - -0.2 16,557 - -0.5 16,592 + -0.5 16,641 - +0.6 16,670 + -0.5 16,670 + +0.2 16,670 + -0.5 16,686 + -0.5 16,686 + -0.3 16,697 + -1.4 16,698 - +0.1 16,734 + -0.0 16,734 + -0.1 16,735 - +0.7 16,735 - -0.5 16,735 - -0.8 16,735 - +0.3 16,741 - -0.3 16,745 + -0.5
Or see this region's nucleotide sequence