Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_18300

Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_18295 and CA264_18300 are separated by 235 nucleotidesCA264_18300 and CA264_18305 are separated by 108 nucleotidesCA264_18305 and CA264_18310 are separated by 307 nucleotides CA264_18295: CA264_18295 - iron-sulfur cluster-binding protein, at 4,254,173 to 4,255,546 _18295 CA264_18300: CA264_18300 - peptidase M28, at 4,255,782 to 4,257,338 _18300 CA264_18305: CA264_18305 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 4,257,447 to 4,257,932 _18305 CA264_18310: CA264_18310 - hypothetical protein, at 4,258,240 to 4,258,374 _18310 Position (kb) 4255 4256 4257 4258Strain fitness (log2 ratio) -2 -1 0 1 2at 4254.868 kb on + strand, within CA264_18295at 4254.869 kb on - strand, within CA264_18295at 4254.970 kb on - strand, within CA264_18295at 4255.094 kb on + strand, within CA264_18295at 4255.095 kb on - strand, within CA264_18295at 4255.095 kb on - strand, within CA264_18295at 4255.134 kb on + strand, within CA264_18295at 4255.134 kb on + strand, within CA264_18295at 4255.304 kb on + strand, within CA264_18295at 4255.304 kb on + strand, within CA264_18295at 4255.351 kb on - strand, within CA264_18295at 4255.456 kb on - strandat 4255.456 kb on - strandat 4255.456 kb on - strandat 4255.535 kb on + strandat 4255.536 kb on - strandat 4255.541 kb on - strandat 4255.650 kb on - strandat 4255.661 kb on + strandat 4255.661 kb on + strandat 4255.695 kb on + strandat 4255.698 kb on + strandat 4255.710 kb on + strandat 4255.711 kb on - strandat 4255.760 kb on + strandat 4255.760 kb on + strandat 4255.776 kb on - strandat 4255.776 kb on - strandat 4255.791 kb on - strandat 4255.940 kb on - strand, within CA264_18300at 4256.023 kb on + strand, within CA264_18300at 4256.023 kb on + strand, within CA264_18300at 4256.023 kb on + strand, within CA264_18300at 4256.024 kb on - strandat 4256.024 kb on - strand, within CA264_18300at 4256.024 kb on - strand, within CA264_18300at 4256.024 kb on - strand, within CA264_18300at 4256.027 kb on + strand, within CA264_18300at 4256.027 kb on + strand, within CA264_18300at 4256.027 kb on + strand, within CA264_18300at 4256.029 kb on + strand, within CA264_18300at 4256.029 kb on + strand, within CA264_18300at 4256.050 kb on + strand, within CA264_18300at 4256.117 kb on - strand, within CA264_18300at 4256.117 kb on - strand, within CA264_18300at 4256.122 kb on + strand, within CA264_18300at 4256.122 kb on + strand, within CA264_18300at 4256.122 kb on + strand, within CA264_18300at 4256.122 kb on + strand, within CA264_18300at 4256.123 kb on - strand, within CA264_18300at 4256.123 kb on - strand, within CA264_18300at 4256.123 kb on - strand, within CA264_18300at 4256.123 kb on - strand, within CA264_18300at 4256.152 kb on + strand, within CA264_18300at 4256.230 kb on + strand, within CA264_18300at 4256.231 kb on - strand, within CA264_18300at 4256.231 kb on - strand, within CA264_18300at 4256.281 kb on - strand, within CA264_18300at 4256.281 kb on - strand, within CA264_18300at 4256.385 kb on + strand, within CA264_18300at 4256.428 kb on + strand, within CA264_18300at 4256.429 kb on - strand, within CA264_18300at 4256.479 kb on + strand, within CA264_18300at 4256.655 kb on + strand, within CA264_18300at 4256.755 kb on + strand, within CA264_18300at 4256.755 kb on + strand, within CA264_18300at 4256.756 kb on - strand, within CA264_18300at 4256.756 kb on - strand, within CA264_18300at 4256.844 kb on + strand, within CA264_18300at 4256.862 kb on + strand, within CA264_18300at 4256.863 kb on - strand, within CA264_18300at 4256.877 kb on + strand, within CA264_18300at 4256.878 kb on - strand, within CA264_18300at 4256.899 kb on + strand, within CA264_18300at 4256.900 kb on - strand, within CA264_18300at 4256.901 kb on + strand, within CA264_18300at 4256.902 kb on - strand, within CA264_18300at 4257.140 kb on + strand, within CA264_18300at 4257.141 kb on - strand, within CA264_18300at 4257.143 kb on + strand, within CA264_18300at 4257.143 kb on + strand, within CA264_18300at 4257.143 kb on + strand, within CA264_18300at 4257.171 kb on - strand, within CA264_18300at 4257.330 kb on - strandat 4257.338 kb on + strandat 4257.338 kb on + strandat 4257.339 kb on - strandat 4257.391 kb on - strandat 4257.445 kb on + strandat 4257.449 kb on - strandat 4257.449 kb on - strandat 4257.449 kb on - strandat 4257.449 kb on - strandat 4257.945 kb on - strandat 4257.945 kb on - strandat 4257.945 kb on - strandat 4257.948 kb on + strandat 4257.948 kb on + strandat 4257.948 kb on + strandat 4257.948 kb on + strandat 4257.948 kb on + strandat 4257.949 kb on - strandat 4257.949 kb on - strandat 4257.949 kb on - strandat 4257.949 kb on - strandat 4257.949 kb on - strandat 4257.955 kb on + strandat 4257.955 kb on + strandat 4257.955 kb on + strandat 4257.958 kb on + strandat 4257.992 kb on + strandat 4257.992 kb on + strandat 4257.993 kb on - strandat 4257.993 kb on - strandat 4257.996 kb on + strandat 4257.997 kb on - strandat 4258.008 kb on - strandat 4258.019 kb on + strandat 4258.019 kb on + strandat 4258.019 kb on + strandat 4258.020 kb on - strandat 4258.043 kb on + strandat 4258.062 kb on - strandat 4258.066 kb on + strandat 4258.151 kb on - strandat 4258.173 kb on + strandat 4258.235 kb on + strandat 4258.235 kb on + strandat 4258.236 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol%
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4,254,868 + CA264_18295 0.51 -0.8
4,254,869 - CA264_18295 0.51 -1.1
4,254,970 - CA264_18295 0.58 -0.9
4,255,094 + CA264_18295 0.67 -1.7
4,255,095 - CA264_18295 0.67 -0.8
4,255,095 - CA264_18295 0.67 -1.8
4,255,134 + CA264_18295 0.70 +0.1
4,255,134 + CA264_18295 0.70 -1.3
4,255,304 + CA264_18295 0.82 -1.3
4,255,304 + CA264_18295 0.82 -1.0
4,255,351 - CA264_18295 0.86 -1.1
4,255,456 - -1.5
4,255,456 - -1.3
4,255,456 - -1.8
4,255,535 + +0.2
4,255,536 - -0.8
4,255,541 - -0.5
4,255,650 - +1.4
4,255,661 + -0.1
4,255,661 + -0.3
4,255,695 + +0.3
4,255,698 + -0.5
4,255,710 + +1.4
4,255,711 - +0.1
4,255,760 + +0.1
4,255,760 + +0.7
4,255,776 - -1.7
4,255,776 - +0.9
4,255,791 - -0.2
4,255,940 - CA264_18300 0.10 -0.4
4,256,023 + CA264_18300 0.15 -0.1
4,256,023 + CA264_18300 0.15 +0.6
4,256,023 + CA264_18300 0.15 +0.4
4,256,024 - -0.3
4,256,024 - CA264_18300 0.16 -0.7
4,256,024 - CA264_18300 0.16 +0.9
4,256,024 - CA264_18300 0.16 +0.4
4,256,027 + CA264_18300 0.16 -0.4
4,256,027 + CA264_18300 0.16 -0.2
4,256,027 + CA264_18300 0.16 +0.2
4,256,029 + CA264_18300 0.16 -0.3
4,256,029 + CA264_18300 0.16 +0.8
4,256,050 + CA264_18300 0.17 -0.4
4,256,117 - CA264_18300 0.22 -0.7
4,256,117 - CA264_18300 0.22 +0.7
4,256,122 + CA264_18300 0.22 -0.1
4,256,122 + CA264_18300 0.22 -0.3
4,256,122 + CA264_18300 0.22 -0.9
4,256,122 + CA264_18300 0.22 -0.3
4,256,123 - CA264_18300 0.22 -0.3
4,256,123 - CA264_18300 0.22 -0.3
4,256,123 - CA264_18300 0.22 +0.6
4,256,123 - CA264_18300 0.22 -0.3
4,256,152 + CA264_18300 0.24 +0.7
4,256,230 + CA264_18300 0.29 +0.1
4,256,231 - CA264_18300 0.29 -0.5
4,256,231 - CA264_18300 0.29 -0.9
4,256,281 - CA264_18300 0.32 -0.2
4,256,281 - CA264_18300 0.32 -0.0
4,256,385 + CA264_18300 0.39 -0.6
4,256,428 + CA264_18300 0.41 -0.3
4,256,429 - CA264_18300 0.42 +2.1
4,256,479 + CA264_18300 0.45 +0.0
4,256,655 + CA264_18300 0.56 -0.9
4,256,755 + CA264_18300 0.62 +0.2
4,256,755 + CA264_18300 0.62 -0.1
4,256,756 - CA264_18300 0.63 +0.7
4,256,756 - CA264_18300 0.63 -0.4
4,256,844 + CA264_18300 0.68 -0.1
4,256,862 + CA264_18300 0.69 +0.7
4,256,863 - CA264_18300 0.69 -0.5
4,256,877 + CA264_18300 0.70 -0.3
4,256,878 - CA264_18300 0.70 +0.9
4,256,899 + CA264_18300 0.72 -1.1
4,256,900 - CA264_18300 0.72 +0.0
4,256,901 + CA264_18300 0.72 -0.4
4,256,902 - CA264_18300 0.72 -0.5
4,257,140 + CA264_18300 0.87 -0.4
4,257,141 - CA264_18300 0.87 +0.1
4,257,143 + CA264_18300 0.87 +0.4
4,257,143 + CA264_18300 0.87 -0.1
4,257,143 + CA264_18300 0.87 -0.8
4,257,171 - CA264_18300 0.89 -0.1
4,257,330 - +0.1
4,257,338 + -1.1
4,257,338 + -0.7
4,257,339 - -0.7
4,257,391 - -0.6
4,257,445 + +0.1
4,257,449 - -0.1
4,257,449 - +0.0
4,257,449 - -1.1
4,257,449 - +0.1
4,257,945 - -0.7
4,257,945 - +0.5
4,257,945 - -0.2
4,257,948 + -0.1
4,257,948 + -1.5
4,257,948 + +0.7
4,257,948 + -1.9
4,257,948 + -0.5
4,257,949 - +0.8
4,257,949 - +0.6
4,257,949 - +0.5
4,257,949 - +1.1
4,257,949 - -0.5
4,257,955 + +0.9
4,257,955 + -0.6
4,257,955 + +0.4
4,257,958 + +0.1
4,257,992 + +0.4
4,257,992 + -0.5
4,257,993 - +0.6
4,257,993 - -0.1
4,257,996 + +0.6
4,257,997 - -0.1
4,258,008 - -0.6
4,258,019 + +0.1
4,258,019 + -1.4
4,258,019 + -0.5
4,258,020 - -0.8
4,258,043 + +0.1
4,258,062 - -0.6
4,258,066 + +0.3
4,258,151 - -0.7
4,258,173 + -0.1
4,258,235 + -0.3
4,258,235 + +0.4
4,258,236 - -0.3

Or see this region's nucleotide sequence