Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16760 and CA264_16765 are separated by 208 nucleotides CA264_16765 and CA264_16770 are separated by 203 nucleotides CA264_16770 and CA264_16775 are separated by 254 nucleotides
CA264_16760: CA264_16760 - hypothetical protein, at 3,907,393 to 3,909,216
_16760
CA264_16765: CA264_16765 - coproporphyrinogen III oxidase, at 3,909,425 to 3,910,552
_16765
CA264_16770: CA264_16770 - hypothetical protein, at 3,910,756 to 3,911,091
_16770
CA264_16775: CA264_16775 - metal-dependent hydrolase, at 3,911,346 to 3,912,116
_16775
Position (kb)
3909
3910
3911 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3908.464 kb on + strand, within CA264_16760 at 3908.464 kb on + strand, within CA264_16760 at 3908.465 kb on - strand, within CA264_16760 at 3908.465 kb on - strand, within CA264_16760 at 3908.468 kb on + strand, within CA264_16760 at 3908.469 kb on - strand, within CA264_16760 at 3908.536 kb on + strand, within CA264_16760 at 3908.547 kb on - strand, within CA264_16760 at 3908.547 kb on - strand, within CA264_16760 at 3908.598 kb on + strand, within CA264_16760 at 3908.598 kb on + strand, within CA264_16760 at 3908.599 kb on - strand, within CA264_16760 at 3908.603 kb on + strand, within CA264_16760 at 3908.603 kb on + strand, within CA264_16760 at 3908.603 kb on + strand, within CA264_16760 at 3908.603 kb on + strand, within CA264_16760 at 3908.603 kb on + strand, within CA264_16760 at 3908.604 kb on - strand, within CA264_16760 at 3908.604 kb on - strand, within CA264_16760 at 3908.604 kb on - strand, within CA264_16760 at 3908.649 kb on + strand, within CA264_16760 at 3908.659 kb on + strand, within CA264_16760 at 3908.661 kb on + strand, within CA264_16760 at 3908.662 kb on - strand, within CA264_16760 at 3908.665 kb on + strand, within CA264_16760 at 3908.740 kb on + strand, within CA264_16760 at 3908.740 kb on + strand, within CA264_16760 at 3908.741 kb on - strand, within CA264_16760 at 3908.741 kb on - strand, within CA264_16760 at 3908.744 kb on + strand, within CA264_16760 at 3908.745 kb on - strand, within CA264_16760 at 3908.745 kb on - strand, within CA264_16760 at 3908.745 kb on - strand, within CA264_16760 at 3908.898 kb on - strand, within CA264_16760 at 3908.901 kb on + strand, within CA264_16760 at 3908.901 kb on + strand, within CA264_16760 at 3908.901 kb on + strand, within CA264_16760 at 3908.902 kb on - strand, within CA264_16760 at 3908.902 kb on - strand, within CA264_16760 at 3908.902 kb on - strand, within CA264_16760 at 3908.924 kb on + strand, within CA264_16760 at 3908.925 kb on - strand, within CA264_16760 at 3908.946 kb on - strand, within CA264_16760 at 3909.212 kb on + strand at 3909.233 kb on + strand at 3909.234 kb on - strand at 3909.254 kb on + strand at 3909.254 kb on + strand at 3909.316 kb on + strand at 3909.382 kb on + strand at 3909.382 kb on + strand at 3909.383 kb on - strand at 3909.437 kb on + strand at 3909.590 kb on + strand, within CA264_16765 at 3909.640 kb on - strand, within CA264_16765 at 3909.669 kb on + strand, within CA264_16765 at 3909.874 kb on + strand, within CA264_16765 at 3909.875 kb on - strand, within CA264_16765 at 3909.884 kb on - strand, within CA264_16765 at 3910.043 kb on - strand, within CA264_16765 at 3910.121 kb on + strand, within CA264_16765 at 3910.194 kb on - strand, within CA264_16765 at 3910.194 kb on - strand, within CA264_16765 at 3910.194 kb on - strand, within CA264_16765 at 3910.194 kb on - strand, within CA264_16765 at 3910.203 kb on + strand, within CA264_16765 at 3910.244 kb on + strand, within CA264_16765 at 3910.245 kb on - strand, within CA264_16765 at 3910.352 kb on - strand, within CA264_16765 at 3910.352 kb on - strand, within CA264_16765 at 3910.403 kb on + strand, within CA264_16765 at 3910.410 kb on - strand, within CA264_16765 at 3910.490 kb on + strand at 3910.551 kb on - strand at 3910.551 kb on - strand at 3910.562 kb on + strand at 3910.563 kb on - strand at 3910.563 kb on - strand at 3910.567 kb on - strand at 3910.568 kb on + strand at 3910.585 kb on - strand at 3910.601 kb on + strand at 3910.606 kb on - strand at 3910.608 kb on - strand at 3910.646 kb on + strand at 3910.656 kb on + strand at 3910.717 kb on + strand at 3910.718 kb on - strand at 3910.718 kb on - strand at 3910.720 kb on - strand at 3910.721 kb on + strand at 3910.721 kb on + strand at 3910.805 kb on + strand, within CA264_16770 at 3910.913 kb on - strand, within CA264_16770 at 3910.915 kb on + strand, within CA264_16770 at 3910.915 kb on + strand, within CA264_16770 at 3910.916 kb on - strand, within CA264_16770 at 3910.936 kb on - strand, within CA264_16770 at 3910.936 kb on - strand, within CA264_16770 at 3911.090 kb on - strand at 3911.141 kb on - strand at 3911.144 kb on + strand at 3911.144 kb on + strand at 3911.144 kb on + strand at 3911.144 kb on + strand at 3911.145 kb on - strand at 3911.146 kb on + strand at 3911.147 kb on - strand at 3911.189 kb on - strand at 3911.189 kb on - strand at 3911.316 kb on + strand at 3911.317 kb on - strand at 3911.320 kb on + strand at 3911.321 kb on - strand at 3911.321 kb on - strand at 3911.321 kb on - strand at 3911.323 kb on - strand at 3911.357 kb on + strand at 3911.361 kb on - strand at 3911.364 kb on + strand at 3911.380 kb on - strand at 3911.388 kb on - strand at 3911.472 kb on + strand, within CA264_16775 at 3911.532 kb on + strand, within CA264_16775 at 3911.532 kb on + strand, within CA264_16775 at 3911.533 kb on - strand, within CA264_16775 at 3911.533 kb on - strand, within CA264_16775
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 3,908,464 + CA264_16760 0.59 +0.9 3,908,464 + CA264_16760 0.59 +0.5 3,908,465 - CA264_16760 0.59 +0.4 3,908,465 - CA264_16760 0.59 -0.5 3,908,468 + CA264_16760 0.59 +0.1 3,908,469 - CA264_16760 0.59 +0.2 3,908,536 + CA264_16760 0.63 +0.1 3,908,547 - CA264_16760 0.63 +0.9 3,908,547 - CA264_16760 0.63 -0.9 3,908,598 + CA264_16760 0.66 -1.4 3,908,598 + CA264_16760 0.66 -0.2 3,908,599 - CA264_16760 0.66 +0.6 3,908,603 + CA264_16760 0.66 -0.8 3,908,603 + CA264_16760 0.66 -1.3 3,908,603 + CA264_16760 0.66 -0.3 3,908,603 + CA264_16760 0.66 +0.2 3,908,603 + CA264_16760 0.66 +0.0 3,908,604 - CA264_16760 0.66 +1.9 3,908,604 - CA264_16760 0.66 +0.2 3,908,604 - CA264_16760 0.66 +0.5 3,908,649 + CA264_16760 0.69 -0.8 3,908,659 + CA264_16760 0.69 +0.2 3,908,661 + CA264_16760 0.70 -1.1 3,908,662 - CA264_16760 0.70 -0.3 3,908,665 + CA264_16760 0.70 -0.3 3,908,740 + CA264_16760 0.74 -0.8 3,908,740 + CA264_16760 0.74 -0.1 3,908,741 - CA264_16760 0.74 -0.5 3,908,741 - CA264_16760 0.74 +0.7 3,908,744 + CA264_16760 0.74 -0.2 3,908,745 - CA264_16760 0.74 -0.3 3,908,745 - CA264_16760 0.74 +0.4 3,908,745 - CA264_16760 0.74 -0.1 3,908,898 - CA264_16760 0.83 +1.2 3,908,901 + CA264_16760 0.83 +2.7 3,908,901 + CA264_16760 0.83 +0.1 3,908,901 + CA264_16760 0.83 +0.3 3,908,902 - CA264_16760 0.83 +0.4 3,908,902 - CA264_16760 0.83 +0.2 3,908,902 - CA264_16760 0.83 -1.4 3,908,924 + CA264_16760 0.84 -0.3 3,908,925 - CA264_16760 0.84 -0.8 3,908,946 - CA264_16760 0.85 -0.5 3,909,212 + +0.0 3,909,233 + -0.2 3,909,234 - -0.2 3,909,254 + +0.1 3,909,254 + +1.6 3,909,316 + -0.5 3,909,382 + -0.2 3,909,382 + +1.1 3,909,383 - +0.7 3,909,437 + -0.0 3,909,590 + CA264_16765 0.15 +0.0 3,909,640 - CA264_16765 0.19 -0.1 3,909,669 + CA264_16765 0.22 -1.1 3,909,874 + CA264_16765 0.40 -0.1 3,909,875 - CA264_16765 0.40 +1.3 3,909,884 - CA264_16765 0.41 +0.1 3,910,043 - CA264_16765 0.55 -1.9 3,910,121 + CA264_16765 0.62 -0.3 3,910,194 - CA264_16765 0.68 +0.5 3,910,194 - CA264_16765 0.68 -0.9 3,910,194 - CA264_16765 0.68 -0.6 3,910,194 - CA264_16765 0.68 +0.1 3,910,203 + CA264_16765 0.69 -0.6 3,910,244 + CA264_16765 0.73 -1.0 3,910,245 - CA264_16765 0.73 -0.4 3,910,352 - CA264_16765 0.82 -1.4 3,910,352 - CA264_16765 0.82 -0.4 3,910,403 + CA264_16765 0.87 -1.4 3,910,410 - CA264_16765 0.87 +0.7 3,910,490 + +0.3 3,910,551 - +0.5 3,910,551 - -0.8 3,910,562 + -0.1 3,910,563 - +0.1 3,910,563 - +0.0 3,910,567 - -0.0 3,910,568 + -0.3 3,910,585 - +0.0 3,910,601 + -0.7 3,910,606 - +0.1 3,910,608 - +4.5 3,910,646 + +0.9 3,910,656 + +0.3 3,910,717 + +0.4 3,910,718 - -0.2 3,910,718 - -0.5 3,910,720 - +0.2 3,910,721 + -0.1 3,910,721 + -0.1 3,910,805 + CA264_16770 0.15 -0.3 3,910,913 - CA264_16770 0.47 -0.8 3,910,915 + CA264_16770 0.47 +0.1 3,910,915 + CA264_16770 0.47 +1.2 3,910,916 - CA264_16770 0.48 -0.1 3,910,936 - CA264_16770 0.54 +0.3 3,910,936 - CA264_16770 0.54 +1.8 3,911,090 - -0.3 3,911,141 - +0.7 3,911,144 + -0.0 3,911,144 + -0.7 3,911,144 + -0.1 3,911,144 + -0.4 3,911,145 - -0.1 3,911,146 + -0.0 3,911,147 - -0.2 3,911,189 - +0.0 3,911,189 - +0.7 3,911,316 + -0.7 3,911,317 - +1.2 3,911,320 + +0.6 3,911,321 - -0.5 3,911,321 - +0.5 3,911,321 - -0.3 3,911,323 - +0.3 3,911,357 + -0.2 3,911,361 - +0.7 3,911,364 + -0.6 3,911,380 - -0.4 3,911,388 - +0.1 3,911,472 + CA264_16775 0.16 -0.3 3,911,532 + CA264_16775 0.24 -0.1 3,911,532 + CA264_16775 0.24 +0.8 3,911,533 - CA264_16775 0.24 +0.7 3,911,533 - CA264_16775 0.24 -0.0
Or see this region's nucleotide sequence