Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16385 and CA264_16390 are separated by 207 nucleotides CA264_16390 and CA264_16395 overlap by 17 nucleotides CA264_16395 and CA264_16400 are separated by 1 nucleotides
CA264_16385: CA264_16385 - DUF4271 domain-containing protein, at 3,813,155 to 3,814,198
_16385
CA264_16390: CA264_16390 - hypothetical protein, at 3,814,406 to 3,814,798
_16390
CA264_16395: CA264_16395 - lipoyl(octanoyl) transferase, at 3,814,782 to 3,815,516
_16395
CA264_16400: CA264_16400 - bifunctional phosphoglucose/phosphomannose isomerase, at 3,815,518 to 3,816,513
_16400
Position (kb)
3814
3815 Strain fitness (log2 ratio)
-1
0
1 at 3813.413 kb on + strand, within CA264_16385 at 3813.510 kb on - strand, within CA264_16385 at 3813.583 kb on + strand, within CA264_16385 at 3813.583 kb on + strand, within CA264_16385 at 3813.760 kb on - strand, within CA264_16385 at 3813.760 kb on - strand, within CA264_16385 at 3813.785 kb on - strand, within CA264_16385 at 3813.800 kb on + strand, within CA264_16385 at 3813.800 kb on + strand, within CA264_16385 at 3813.802 kb on + strand, within CA264_16385 at 3813.802 kb on + strand, within CA264_16385 at 3813.803 kb on - strand, within CA264_16385 at 3813.803 kb on - strand, within CA264_16385 at 3813.809 kb on - strand, within CA264_16385 at 3813.827 kb on + strand, within CA264_16385 at 3813.828 kb on - strand, within CA264_16385 at 3813.831 kb on + strand, within CA264_16385 at 3813.914 kb on + strand, within CA264_16385 at 3813.995 kb on + strand, within CA264_16385 at 3813.996 kb on - strand, within CA264_16385 at 3814.008 kb on + strand, within CA264_16385 at 3814.136 kb on - strand at 3814.137 kb on + strand at 3814.137 kb on + strand at 3814.144 kb on + strand at 3814.161 kb on + strand at 3814.162 kb on - strand at 3814.239 kb on - strand at 3814.286 kb on - strand at 3814.286 kb on - strand at 3814.289 kb on + strand at 3814.290 kb on - strand at 3814.290 kb on - strand at 3814.308 kb on + strand at 3814.308 kb on + strand at 3814.308 kb on + strand at 3814.309 kb on - strand at 3814.441 kb on + strand at 3814.518 kb on + strand, within CA264_16390 at 3814.519 kb on - strand, within CA264_16390 at 3814.521 kb on + strand, within CA264_16390 at 3814.522 kb on - strand, within CA264_16390 at 3814.522 kb on - strand, within CA264_16390 at 3814.717 kb on - strand, within CA264_16390 at 3814.717 kb on - strand, within CA264_16390 at 3814.787 kb on - strand at 3814.812 kb on - strand at 3814.814 kb on + strand at 3815.522 kb on - strand at 3815.554 kb on - strand at 3815.584 kb on + strand at 3815.585 kb on - strand at 3815.764 kb on - strand, within CA264_16400 at 3815.764 kb on - strand, within CA264_16400
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 3,813,413 + CA264_16385 0.25 +0.9 3,813,510 - CA264_16385 0.34 -0.1 3,813,583 + CA264_16385 0.41 +0.9 3,813,583 + CA264_16385 0.41 +0.4 3,813,760 - CA264_16385 0.58 -0.5 3,813,760 - CA264_16385 0.58 +0.2 3,813,785 - CA264_16385 0.60 +1.1 3,813,800 + CA264_16385 0.62 -0.1 3,813,800 + CA264_16385 0.62 -0.3 3,813,802 + CA264_16385 0.62 -0.2 3,813,802 + CA264_16385 0.62 +0.7 3,813,803 - CA264_16385 0.62 -0.3 3,813,803 - CA264_16385 0.62 -0.7 3,813,809 - CA264_16385 0.63 +0.4 3,813,827 + CA264_16385 0.64 -0.2 3,813,828 - CA264_16385 0.64 +0.2 3,813,831 + CA264_16385 0.65 -0.1 3,813,914 + CA264_16385 0.73 -0.4 3,813,995 + CA264_16385 0.80 -0.0 3,813,996 - CA264_16385 0.81 +0.1 3,814,008 + CA264_16385 0.82 -1.4 3,814,136 - -0.8 3,814,137 + -0.4 3,814,137 + -0.1 3,814,144 + -0.2 3,814,161 + +1.0 3,814,162 - +0.9 3,814,239 - +0.2 3,814,286 - -0.5 3,814,286 - -0.1 3,814,289 + -1.3 3,814,290 - +1.2 3,814,290 - -0.5 3,814,308 + -0.0 3,814,308 + -0.6 3,814,308 + -0.2 3,814,309 - -0.6 3,814,441 + -0.8 3,814,518 + CA264_16390 0.28 -0.8 3,814,519 - CA264_16390 0.29 +0.2 3,814,521 + CA264_16390 0.29 -0.2 3,814,522 - CA264_16390 0.30 +0.2 3,814,522 - CA264_16390 0.30 +0.9 3,814,717 - CA264_16390 0.79 +0.3 3,814,717 - CA264_16390 0.79 +0.7 3,814,787 - -0.4 3,814,812 - +0.1 3,814,814 + -0.4 3,815,522 - -0.3 3,815,554 - +0.6 3,815,584 + +0.2 3,815,585 - -1.3 3,815,764 - CA264_16400 0.25 -0.6 3,815,764 - CA264_16400 0.25 +0.0
Or see this region's nucleotide sequence