Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15045 and CA264_15050 are separated by 32 nucleotides CA264_15050 and CA264_15055 are separated by 24 nucleotides CA264_15055 and CA264_15060 are separated by 540 nucleotides
CA264_15045: CA264_15045 - acetyl-CoA acetyltransferase, at 3,531,423 to 3,532,601
_15045
CA264_15050: CA264_15050 - 3-hydroxyacyl-CoA dehydrogenase, at 3,532,634 to 3,535,036
_15050
CA264_15055: CA264_15055 - MarR family transcriptional regulator, at 3,535,061 to 3,535,495
_15055
CA264_15060: CA264_15060 - long-chain fatty acid--CoA ligase, at 3,536,036 to 3,537,793
_15060
Position (kb)
3532
3533
3534
3535
3536 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3531.778 kb on - strand, within CA264_15045 at 3531.882 kb on + strand, within CA264_15045 at 3531.888 kb on - strand, within CA264_15045 at 3531.888 kb on - strand, within CA264_15045 at 3531.969 kb on + strand, within CA264_15045 at 3531.970 kb on - strand, within CA264_15045 at 3531.974 kb on - strand, within CA264_15045 at 3531.974 kb on - strand, within CA264_15045 at 3531.974 kb on - strand, within CA264_15045 at 3532.140 kb on + strand, within CA264_15045 at 3532.202 kb on - strand, within CA264_15045 at 3532.253 kb on + strand, within CA264_15045 at 3532.488 kb on + strand at 3532.489 kb on - strand at 3532.489 kb on - strand at 3532.586 kb on + strand at 3532.587 kb on - strand at 3532.588 kb on + strand at 3532.589 kb on - strand at 3532.589 kb on - strand at 3532.589 kb on - strand at 3532.615 kb on + strand at 3532.617 kb on + strand at 3532.622 kb on + strand at 3532.622 kb on + strand at 3532.622 kb on + strand at 3532.623 kb on - strand at 3532.623 kb on - strand at 3532.623 kb on - strand at 3532.625 kb on - strand at 3532.657 kb on + strand at 3532.658 kb on - strand at 3532.791 kb on + strand at 3532.831 kb on + strand at 3532.831 kb on + strand at 3532.832 kb on - strand at 3532.834 kb on - strand at 3532.873 kb on + strand at 3532.873 kb on + strand at 3532.874 kb on - strand at 3532.877 kb on + strand, within CA264_15050 at 3532.878 kb on - strand, within CA264_15050 at 3532.945 kb on + strand, within CA264_15050 at 3532.945 kb on + strand, within CA264_15050 at 3532.949 kb on + strand, within CA264_15050 at 3532.949 kb on + strand, within CA264_15050 at 3532.949 kb on + strand, within CA264_15050 at 3532.950 kb on - strand, within CA264_15050 at 3533.017 kb on + strand, within CA264_15050 at 3533.018 kb on - strand, within CA264_15050 at 3533.018 kb on - strand, within CA264_15050 at 3533.019 kb on + strand, within CA264_15050 at 3533.019 kb on + strand, within CA264_15050 at 3533.019 kb on + strand, within CA264_15050 at 3533.019 kb on + strand, within CA264_15050 at 3533.024 kb on + strand, within CA264_15050 at 3533.025 kb on - strand, within CA264_15050 at 3533.051 kb on - strand, within CA264_15050 at 3533.059 kb on + strand, within CA264_15050 at 3533.065 kb on + strand, within CA264_15050 at 3533.065 kb on + strand, within CA264_15050 at 3533.101 kb on - strand, within CA264_15050 at 3533.121 kb on + strand, within CA264_15050 at 3533.121 kb on + strand, within CA264_15050 at 3533.122 kb on - strand, within CA264_15050 at 3533.122 kb on - strand, within CA264_15050 at 3533.122 kb on - strand, within CA264_15050 at 3533.126 kb on - strand, within CA264_15050 at 3533.180 kb on + strand, within CA264_15050 at 3533.180 kb on + strand, within CA264_15050 at 3533.193 kb on - strand, within CA264_15050 at 3533.205 kb on + strand, within CA264_15050 at 3533.205 kb on + strand, within CA264_15050 at 3533.206 kb on - strand, within CA264_15050 at 3533.206 kb on - strand, within CA264_15050 at 3533.288 kb on + strand, within CA264_15050 at 3533.289 kb on - strand, within CA264_15050 at 3533.289 kb on - strand, within CA264_15050 at 3533.297 kb on + strand, within CA264_15050 at 3533.364 kb on + strand, within CA264_15050 at 3533.364 kb on + strand, within CA264_15050 at 3533.365 kb on - strand, within CA264_15050 at 3533.382 kb on + strand, within CA264_15050 at 3533.382 kb on + strand, within CA264_15050 at 3533.382 kb on + strand, within CA264_15050 at 3533.382 kb on + strand, within CA264_15050 at 3533.382 kb on + strand, within CA264_15050 at 3533.388 kb on + strand, within CA264_15050 at 3533.388 kb on + strand, within CA264_15050 at 3533.388 kb on + strand, within CA264_15050 at 3533.388 kb on + strand, within CA264_15050 at 3533.389 kb on - strand, within CA264_15050 at 3533.389 kb on - strand, within CA264_15050 at 3533.389 kb on - strand, within CA264_15050 at 3533.389 kb on - strand, within CA264_15050 at 3533.389 kb on - strand, within CA264_15050 at 3533.393 kb on - strand, within CA264_15050 at 3533.441 kb on + strand, within CA264_15050 at 3533.477 kb on - strand, within CA264_15050 at 3533.515 kb on + strand, within CA264_15050 at 3533.515 kb on + strand, within CA264_15050 at 3533.516 kb on - strand, within CA264_15050 at 3533.656 kb on - strand, within CA264_15050 at 3533.677 kb on - strand, within CA264_15050 at 3533.700 kb on - strand, within CA264_15050 at 3533.700 kb on - strand, within CA264_15050 at 3533.707 kb on - strand, within CA264_15050 at 3533.758 kb on + strand, within CA264_15050 at 3533.759 kb on - strand, within CA264_15050 at 3533.759 kb on - strand, within CA264_15050 at 3533.759 kb on - strand, within CA264_15050 at 3533.759 kb on - strand, within CA264_15050 at 3533.761 kb on - strand, within CA264_15050 at 3533.777 kb on - strand, within CA264_15050 at 3533.897 kb on - strand, within CA264_15050 at 3533.902 kb on + strand, within CA264_15050 at 3534.140 kb on - strand, within CA264_15050 at 3534.177 kb on + strand, within CA264_15050 at 3534.177 kb on + strand, within CA264_15050 at 3534.178 kb on - strand, within CA264_15050 at 3534.229 kb on - strand, within CA264_15050 at 3534.269 kb on + strand, within CA264_15050 at 3534.269 kb on + strand, within CA264_15050 at 3534.270 kb on - strand, within CA264_15050 at 3534.270 kb on - strand, within CA264_15050 at 3534.270 kb on - strand, within CA264_15050 at 3534.270 kb on - strand, within CA264_15050 at 3534.270 kb on - strand, within CA264_15050 at 3534.313 kb on + strand, within CA264_15050 at 3534.342 kb on - strand, within CA264_15050 at 3534.390 kb on + strand, within CA264_15050 at 3534.390 kb on + strand, within CA264_15050 at 3534.391 kb on - strand, within CA264_15050 at 3534.394 kb on + strand, within CA264_15050 at 3534.395 kb on - strand, within CA264_15050 at 3534.424 kb on + strand, within CA264_15050 at 3534.437 kb on + strand, within CA264_15050 at 3534.443 kb on - strand, within CA264_15050 at 3534.449 kb on - strand, within CA264_15050 at 3534.457 kb on - strand, within CA264_15050 at 3534.458 kb on + strand, within CA264_15050 at 3534.458 kb on + strand, within CA264_15050 at 3534.459 kb on - strand, within CA264_15050 at 3534.459 kb on - strand, within CA264_15050 at 3534.459 kb on - strand, within CA264_15050 at 3534.459 kb on - strand, within CA264_15050 at 3534.468 kb on + strand, within CA264_15050 at 3534.489 kb on - strand, within CA264_15050 at 3534.489 kb on - strand, within CA264_15050 at 3534.511 kb on + strand, within CA264_15050 at 3534.512 kb on - strand, within CA264_15050 at 3534.515 kb on + strand, within CA264_15050 at 3534.515 kb on + strand, within CA264_15050 at 3534.516 kb on - strand, within CA264_15050 at 3534.516 kb on - strand, within CA264_15050 at 3534.517 kb on + strand, within CA264_15050 at 3534.517 kb on + strand, within CA264_15050 at 3534.518 kb on - strand, within CA264_15050 at 3534.551 kb on - strand, within CA264_15050 at 3534.631 kb on + strand, within CA264_15050 at 3534.634 kb on + strand, within CA264_15050 at 3534.643 kb on + strand, within CA264_15050 at 3534.644 kb on - strand, within CA264_15050 at 3534.644 kb on - strand, within CA264_15050 at 3534.644 kb on - strand, within CA264_15050 at 3534.644 kb on - strand, within CA264_15050 at 3534.644 kb on - strand, within CA264_15050 at 3534.754 kb on + strand, within CA264_15050 at 3534.754 kb on + strand, within CA264_15050 at 3534.755 kb on - strand, within CA264_15050 at 3534.770 kb on - strand, within CA264_15050 at 3534.826 kb on + strand at 3534.827 kb on - strand at 3534.829 kb on + strand at 3534.829 kb on + strand at 3534.959 kb on - strand at 3535.004 kb on + strand at 3535.025 kb on + strand at 3535.036 kb on + strand at 3535.041 kb on + strand at 3535.042 kb on - strand at 3535.045 kb on + strand at 3535.045 kb on + strand at 3535.045 kb on + strand at 3535.045 kb on + strand at 3535.046 kb on - strand at 3535.047 kb on + strand at 3535.047 kb on + strand at 3535.047 kb on + strand at 3535.047 kb on + strand at 3535.047 kb on + strand at 3535.048 kb on - strand at 3535.062 kb on + strand at 3535.094 kb on + strand at 3535.107 kb on - strand, within CA264_15055 at 3535.262 kb on - strand, within CA264_15055 at 3535.263 kb on + strand, within CA264_15055 at 3535.263 kb on + strand, within CA264_15055 at 3535.264 kb on - strand, within CA264_15055 at 3535.267 kb on + strand, within CA264_15055 at 3535.268 kb on - strand, within CA264_15055 at 3535.337 kb on + strand, within CA264_15055 at 3535.382 kb on + strand, within CA264_15055 at 3535.383 kb on - strand, within CA264_15055 at 3535.402 kb on + strand, within CA264_15055 at 3535.402 kb on + strand, within CA264_15055 at 3535.402 kb on + strand, within CA264_15055 at 3535.402 kb on + strand, within CA264_15055 at 3535.403 kb on - strand, within CA264_15055 at 3535.403 kb on - strand, within CA264_15055 at 3535.432 kb on - strand, within CA264_15055 at 3535.462 kb on + strand at 3535.470 kb on + strand at 3535.475 kb on + strand at 3535.511 kb on - strand at 3535.520 kb on - strand at 3535.601 kb on + strand at 3535.602 kb on - strand at 3535.603 kb on + strand at 3535.610 kb on + strand at 3535.618 kb on + strand at 3535.618 kb on + strand at 3535.622 kb on + strand at 3535.625 kb on - strand at 3535.628 kb on - strand at 3535.648 kb on + strand at 3535.648 kb on + strand at 3535.651 kb on + strand at 3535.733 kb on + strand at 3535.757 kb on - strand at 3535.758 kb on + strand at 3535.759 kb on - strand at 3535.759 kb on - strand at 3535.763 kb on - strand at 3535.769 kb on - strand at 3535.769 kb on - strand at 3535.780 kb on + strand at 3535.780 kb on + strand at 3535.781 kb on - strand at 3535.815 kb on + strand at 3535.910 kb on + strand at 3535.912 kb on + strand at 3535.912 kb on + strand at 3535.912 kb on + strand at 3535.914 kb on + strand at 3535.914 kb on + strand at 3535.914 kb on + strand at 3535.915 kb on - strand at 3535.918 kb on - strand at 3536.027 kb on - strand at 3536.027 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 3,531,778 - CA264_15045 0.30 +0.5 3,531,882 + CA264_15045 0.39 +1.1 3,531,888 - CA264_15045 0.39 -0.4 3,531,888 - CA264_15045 0.39 +0.3 3,531,969 + CA264_15045 0.46 +0.5 3,531,970 - CA264_15045 0.46 -0.7 3,531,974 - CA264_15045 0.47 +0.3 3,531,974 - CA264_15045 0.47 -0.2 3,531,974 - CA264_15045 0.47 -0.0 3,532,140 + CA264_15045 0.61 +0.3 3,532,202 - CA264_15045 0.66 -0.3 3,532,253 + CA264_15045 0.70 +0.4 3,532,488 + +1.0 3,532,489 - +2.3 3,532,489 - +1.1 3,532,586 + +0.1 3,532,587 - +0.4 3,532,588 + +0.4 3,532,589 - -0.0 3,532,589 - +0.3 3,532,589 - +0.4 3,532,615 + -0.6 3,532,617 + -0.9 3,532,622 + +0.1 3,532,622 + +0.9 3,532,622 + +0.6 3,532,623 - -0.6 3,532,623 - +0.2 3,532,623 - +0.1 3,532,625 - -0.6 3,532,657 + -0.1 3,532,658 - +0.0 3,532,791 + +0.1 3,532,831 + -0.0 3,532,831 + +0.9 3,532,832 - +0.8 3,532,834 - +0.2 3,532,873 + +0.4 3,532,873 + -1.2 3,532,874 - -0.6 3,532,877 + CA264_15050 0.10 -0.5 3,532,878 - CA264_15050 0.10 -0.6 3,532,945 + CA264_15050 0.13 +0.5 3,532,945 + CA264_15050 0.13 +0.0 3,532,949 + CA264_15050 0.13 +0.3 3,532,949 + CA264_15050 0.13 +2.1 3,532,949 + CA264_15050 0.13 +0.9 3,532,950 - CA264_15050 0.13 +0.0 3,533,017 + CA264_15050 0.16 +0.0 3,533,018 - CA264_15050 0.16 +1.7 3,533,018 - CA264_15050 0.16 -0.5 3,533,019 + CA264_15050 0.16 -0.3 3,533,019 + CA264_15050 0.16 +0.9 3,533,019 + CA264_15050 0.16 +0.8 3,533,019 + CA264_15050 0.16 +0.6 3,533,024 + CA264_15050 0.16 +1.1 3,533,025 - CA264_15050 0.16 +0.4 3,533,051 - CA264_15050 0.17 +0.9 3,533,059 + CA264_15050 0.18 -0.6 3,533,065 + CA264_15050 0.18 +0.5 3,533,065 + CA264_15050 0.18 +0.8 3,533,101 - CA264_15050 0.19 -0.1 3,533,121 + CA264_15050 0.20 -0.5 3,533,121 + CA264_15050 0.20 +0.2 3,533,122 - CA264_15050 0.20 -0.1 3,533,122 - CA264_15050 0.20 +1.7 3,533,122 - CA264_15050 0.20 +0.2 3,533,126 - CA264_15050 0.20 -0.6 3,533,180 + CA264_15050 0.23 +0.4 3,533,180 + CA264_15050 0.23 +1.6 3,533,193 - CA264_15050 0.23 -1.3 3,533,205 + CA264_15050 0.24 +0.5 3,533,205 + CA264_15050 0.24 -0.5 3,533,206 - CA264_15050 0.24 +0.2 3,533,206 - CA264_15050 0.24 +1.7 3,533,288 + CA264_15050 0.27 -1.7 3,533,289 - CA264_15050 0.27 +1.1 3,533,289 - CA264_15050 0.27 +2.3 3,533,297 + CA264_15050 0.28 +0.4 3,533,364 + CA264_15050 0.30 +0.9 3,533,364 + CA264_15050 0.30 +1.3 3,533,365 - CA264_15050 0.30 +0.4 3,533,382 + CA264_15050 0.31 -0.9 3,533,382 + CA264_15050 0.31 +0.5 3,533,382 + CA264_15050 0.31 -0.5 3,533,382 + CA264_15050 0.31 -0.8 3,533,382 + CA264_15050 0.31 +0.2 3,533,388 + CA264_15050 0.31 +2.5 3,533,388 + CA264_15050 0.31 +1.5 3,533,388 + CA264_15050 0.31 +0.7 3,533,388 + CA264_15050 0.31 +0.1 3,533,389 - CA264_15050 0.31 -0.2 3,533,389 - CA264_15050 0.31 -0.1 3,533,389 - CA264_15050 0.31 -0.1 3,533,389 - CA264_15050 0.31 -0.2 3,533,389 - CA264_15050 0.31 +0.2 3,533,393 - CA264_15050 0.32 +0.1 3,533,441 + CA264_15050 0.34 +0.0 3,533,477 - CA264_15050 0.35 +0.4 3,533,515 + CA264_15050 0.37 +0.1 3,533,515 + CA264_15050 0.37 -0.3 3,533,516 - CA264_15050 0.37 +0.2 3,533,656 - CA264_15050 0.43 +0.8 3,533,677 - CA264_15050 0.43 -0.1 3,533,700 - CA264_15050 0.44 +0.5 3,533,700 - CA264_15050 0.44 -0.0 3,533,707 - CA264_15050 0.45 +0.4 3,533,758 + CA264_15050 0.47 -0.2 3,533,759 - CA264_15050 0.47 +0.5 3,533,759 - CA264_15050 0.47 +0.6 3,533,759 - CA264_15050 0.47 +0.2 3,533,759 - CA264_15050 0.47 -0.1 3,533,761 - CA264_15050 0.47 +0.5 3,533,777 - CA264_15050 0.48 +1.1 3,533,897 - CA264_15050 0.53 +0.3 3,533,902 + CA264_15050 0.53 +0.3 3,534,140 - CA264_15050 0.63 -0.1 3,534,177 + CA264_15050 0.64 +0.1 3,534,177 + CA264_15050 0.64 -0.4 3,534,178 - CA264_15050 0.64 +0.3 3,534,229 - CA264_15050 0.66 +0.5 3,534,269 + CA264_15050 0.68 +0.4 3,534,269 + CA264_15050 0.68 -0.4 3,534,270 - CA264_15050 0.68 -0.2 3,534,270 - CA264_15050 0.68 +1.0 3,534,270 - CA264_15050 0.68 -0.1 3,534,270 - CA264_15050 0.68 +0.8 3,534,270 - CA264_15050 0.68 -0.4 3,534,313 + CA264_15050 0.70 +0.1 3,534,342 - CA264_15050 0.71 +0.5 3,534,390 + CA264_15050 0.73 +0.7 3,534,390 + CA264_15050 0.73 -0.8 3,534,391 - CA264_15050 0.73 -0.0 3,534,394 + CA264_15050 0.73 -0.3 3,534,395 - CA264_15050 0.73 +1.5 3,534,424 + CA264_15050 0.74 +0.3 3,534,437 + CA264_15050 0.75 +0.5 3,534,443 - CA264_15050 0.75 +0.4 3,534,449 - CA264_15050 0.76 +0.3 3,534,457 - CA264_15050 0.76 -0.3 3,534,458 + CA264_15050 0.76 +0.3 3,534,458 + CA264_15050 0.76 +0.8 3,534,459 - CA264_15050 0.76 -0.1 3,534,459 - CA264_15050 0.76 -0.5 3,534,459 - CA264_15050 0.76 +0.9 3,534,459 - CA264_15050 0.76 +0.3 3,534,468 + CA264_15050 0.76 +0.3 3,534,489 - CA264_15050 0.77 +0.8 3,534,489 - CA264_15050 0.77 +0.8 3,534,511 + CA264_15050 0.78 -0.1 3,534,512 - CA264_15050 0.78 -0.1 3,534,515 + CA264_15050 0.78 +0.4 3,534,515 + CA264_15050 0.78 +1.0 3,534,516 - CA264_15050 0.78 -0.4 3,534,516 - CA264_15050 0.78 +0.1 3,534,517 + CA264_15050 0.78 +0.0 3,534,517 + CA264_15050 0.78 +0.5 3,534,518 - CA264_15050 0.78 -0.3 3,534,551 - CA264_15050 0.80 -1.0 3,534,631 + CA264_15050 0.83 +1.3 3,534,634 + CA264_15050 0.83 -0.2 3,534,643 + CA264_15050 0.84 +0.3 3,534,644 - CA264_15050 0.84 +0.3 3,534,644 - CA264_15050 0.84 +0.8 3,534,644 - CA264_15050 0.84 +0.2 3,534,644 - CA264_15050 0.84 +0.1 3,534,644 - CA264_15050 0.84 -0.6 3,534,754 + CA264_15050 0.88 +0.6 3,534,754 + CA264_15050 0.88 +0.5 3,534,755 - CA264_15050 0.88 +0.9 3,534,770 - CA264_15050 0.89 +0.2 3,534,826 + +0.2 3,534,827 - -1.2 3,534,829 + +2.0 3,534,829 + -0.3 3,534,959 - -0.8 3,535,004 + +0.6 3,535,025 + +0.4 3,535,036 + -0.3 3,535,041 + -0.0 3,535,042 - -0.1 3,535,045 + +0.5 3,535,045 + -0.2 3,535,045 + -0.1 3,535,045 + -0.1 3,535,046 - +1.3 3,535,047 + +0.4 3,535,047 + +1.5 3,535,047 + -0.1 3,535,047 + -0.2 3,535,047 + -0.2 3,535,048 - -0.8 3,535,062 + +0.5 3,535,094 + -0.7 3,535,107 - CA264_15055 0.11 -0.6 3,535,262 - CA264_15055 0.46 -0.9 3,535,263 + CA264_15055 0.46 -0.9 3,535,263 + CA264_15055 0.46 -0.9 3,535,264 - CA264_15055 0.47 -0.6 3,535,267 + CA264_15055 0.47 +0.4 3,535,268 - CA264_15055 0.48 -2.1 3,535,337 + CA264_15055 0.63 -0.5 3,535,382 + CA264_15055 0.74 +0.2 3,535,383 - CA264_15055 0.74 -1.0 3,535,402 + CA264_15055 0.78 +0.9 3,535,402 + CA264_15055 0.78 -1.1 3,535,402 + CA264_15055 0.78 -0.9 3,535,402 + CA264_15055 0.78 -0.5 3,535,403 - CA264_15055 0.79 -0.3 3,535,403 - CA264_15055 0.79 +1.5 3,535,432 - CA264_15055 0.85 -0.4 3,535,462 + -1.5 3,535,470 + -0.5 3,535,475 + +1.7 3,535,511 - -0.2 3,535,520 - +0.1 3,535,601 + -0.3 3,535,602 - -0.2 3,535,603 + +0.9 3,535,610 + -0.8 3,535,618 + -0.1 3,535,618 + -1.9 3,535,622 + +0.2 3,535,625 - +0.2 3,535,628 - -0.5 3,535,648 + -0.0 3,535,648 + -0.5 3,535,651 + -0.1 3,535,733 + +0.7 3,535,757 - +0.4 3,535,758 + -1.8 3,535,759 - -0.5 3,535,759 - +0.9 3,535,763 - -0.5 3,535,769 - -0.1 3,535,769 - +0.0 3,535,780 + +0.0 3,535,780 + -0.1 3,535,781 - +0.0 3,535,815 + +0.3 3,535,910 + -0.0 3,535,912 + +0.4 3,535,912 + +0.5 3,535,912 + +0.1 3,535,914 + -0.4 3,535,914 + +0.8 3,535,914 + -0.6 3,535,915 - -0.5 3,535,918 - -0.1 3,536,027 - +0.7 3,536,027 - -0.1
Or see this region's nucleotide sequence