Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13515 and CA264_13520 are separated by 59 nucleotides CA264_13520 and CA264_13525 are separated by 211 nucleotides CA264_13525 and CA264_13530 are separated by 237 nucleotides
CA264_13515: CA264_13515 - glyoxalase/bleomycin resistance/dioxygenase family protein, at 3,156,717 to 3,157,139
_13515
CA264_13520: CA264_13520 - thioredoxin family protein, at 3,157,199 to 3,157,843
_13520
CA264_13525: CA264_13525 - NAD-dependent dehydratase, at 3,158,055 to 3,159,008
_13525
CA264_13530: CA264_13530 - hypothetical protein, at 3,159,246 to 3,160,175
_13530
Position (kb)
3158
3159
3160 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3157.078 kb on + strand, within CA264_13515 at 3157.085 kb on - strand, within CA264_13515 at 3157.085 kb on - strand, within CA264_13515 at 3157.138 kb on - strand at 3157.175 kb on + strand at 3157.181 kb on + strand at 3157.181 kb on + strand at 3157.267 kb on + strand, within CA264_13520 at 3157.267 kb on + strand, within CA264_13520 at 3157.476 kb on + strand, within CA264_13520 at 3157.477 kb on - strand, within CA264_13520 at 3157.520 kb on + strand, within CA264_13520 at 3157.613 kb on + strand, within CA264_13520 at 3157.708 kb on + strand, within CA264_13520 at 3157.709 kb on - strand, within CA264_13520 at 3157.710 kb on + strand, within CA264_13520 at 3157.710 kb on + strand, within CA264_13520 at 3157.715 kb on + strand, within CA264_13520 at 3157.715 kb on + strand, within CA264_13520 at 3157.716 kb on - strand, within CA264_13520 at 3157.716 kb on - strand, within CA264_13520 at 3157.716 kb on - strand, within CA264_13520 at 3157.716 kb on - strand, within CA264_13520 at 3157.880 kb on + strand at 3157.885 kb on + strand at 3157.886 kb on - strand at 3157.896 kb on + strand at 3157.896 kb on + strand at 3157.896 kb on + strand at 3157.899 kb on + strand at 3158.015 kb on + strand at 3158.034 kb on + strand at 3158.034 kb on + strand at 3158.102 kb on + strand at 3158.103 kb on - strand at 3158.104 kb on + strand at 3158.104 kb on + strand at 3158.105 kb on - strand at 3158.296 kb on - strand, within CA264_13525 at 3158.321 kb on + strand, within CA264_13525 at 3158.578 kb on + strand, within CA264_13525 at 3158.578 kb on + strand, within CA264_13525 at 3158.578 kb on + strand, within CA264_13525 at 3158.685 kb on + strand, within CA264_13525 at 3158.685 kb on + strand, within CA264_13525 at 3158.685 kb on + strand, within CA264_13525 at 3158.685 kb on + strand, within CA264_13525 at 3158.685 kb on + strand, within CA264_13525 at 3158.686 kb on - strand, within CA264_13525 at 3158.686 kb on - strand, within CA264_13525 at 3158.719 kb on - strand, within CA264_13525 at 3158.729 kb on + strand, within CA264_13525 at 3158.811 kb on - strand, within CA264_13525 at 3158.816 kb on - strand, within CA264_13525 at 3158.886 kb on + strand, within CA264_13525 at 3158.886 kb on + strand, within CA264_13525 at 3158.887 kb on - strand, within CA264_13525 at 3158.912 kb on - strand, within CA264_13525 at 3159.020 kb on + strand at 3159.037 kb on + strand at 3159.042 kb on - strand at 3159.070 kb on + strand at 3159.104 kb on + strand at 3159.131 kb on - strand at 3159.135 kb on + strand at 3159.136 kb on - strand at 3159.140 kb on + strand at 3159.141 kb on - strand at 3159.148 kb on + strand at 3159.166 kb on + strand at 3159.171 kb on + strand at 3159.195 kb on + strand at 3159.207 kb on - strand at 3159.220 kb on - strand at 3159.220 kb on - strand at 3159.225 kb on + strand at 3159.225 kb on + strand at 3159.248 kb on - strand at 3159.273 kb on - strand at 3159.329 kb on + strand at 3159.359 kb on + strand, within CA264_13530 at 3159.369 kb on - strand, within CA264_13530 at 3159.403 kb on + strand, within CA264_13530 at 3159.404 kb on - strand, within CA264_13530 at 3159.404 kb on - strand, within CA264_13530 at 3159.572 kb on + strand, within CA264_13530 at 3159.651 kb on + strand, within CA264_13530 at 3159.651 kb on + strand, within CA264_13530 at 3159.652 kb on - strand, within CA264_13530 at 3159.654 kb on - strand, within CA264_13530 at 3159.698 kb on + strand, within CA264_13530 at 3159.706 kb on + strand, within CA264_13530 at 3159.707 kb on - strand, within CA264_13530 at 3159.710 kb on + strand, within CA264_13530 at 3159.729 kb on + strand, within CA264_13530 at 3159.784 kb on + strand, within CA264_13530 at 3159.874 kb on - strand, within CA264_13530 at 3159.875 kb on + strand, within CA264_13530 at 3159.881 kb on + strand, within CA264_13530 at 3159.947 kb on + strand, within CA264_13530 at 3159.996 kb on - strand, within CA264_13530
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 3,157,078 + CA264_13515 0.85 +0.9 3,157,085 - CA264_13515 0.87 -0.4 3,157,085 - CA264_13515 0.87 -1.0 3,157,138 - -0.2 3,157,175 + +0.3 3,157,181 + -0.5 3,157,181 + +0.3 3,157,267 + CA264_13520 0.11 +0.7 3,157,267 + CA264_13520 0.11 +0.3 3,157,476 + CA264_13520 0.43 +0.5 3,157,477 - CA264_13520 0.43 -0.7 3,157,520 + CA264_13520 0.50 +0.2 3,157,613 + CA264_13520 0.64 +0.5 3,157,708 + CA264_13520 0.79 +0.4 3,157,709 - CA264_13520 0.79 +0.2 3,157,710 + CA264_13520 0.79 +0.8 3,157,710 + CA264_13520 0.79 +0.2 3,157,715 + CA264_13520 0.80 +0.7 3,157,715 + CA264_13520 0.80 -0.3 3,157,716 - CA264_13520 0.80 +0.4 3,157,716 - CA264_13520 0.80 +1.5 3,157,716 - CA264_13520 0.80 -0.4 3,157,716 - CA264_13520 0.80 -0.5 3,157,880 + -0.0 3,157,885 + -0.4 3,157,886 - -1.0 3,157,896 + -0.3 3,157,896 + +0.3 3,157,896 + -0.5 3,157,899 + +0.3 3,158,015 + -1.7 3,158,034 + -0.3 3,158,034 + +0.1 3,158,102 + -0.7 3,158,103 - -0.2 3,158,104 + -1.0 3,158,104 + +0.0 3,158,105 - -0.3 3,158,296 - CA264_13525 0.25 -0.9 3,158,321 + CA264_13525 0.28 -0.6 3,158,578 + CA264_13525 0.55 -0.4 3,158,578 + CA264_13525 0.55 -1.2 3,158,578 + CA264_13525 0.55 -0.4 3,158,685 + CA264_13525 0.66 -0.2 3,158,685 + CA264_13525 0.66 -0.8 3,158,685 + CA264_13525 0.66 +0.3 3,158,685 + CA264_13525 0.66 -0.1 3,158,685 + CA264_13525 0.66 -0.9 3,158,686 - CA264_13525 0.66 -0.2 3,158,686 - CA264_13525 0.66 -0.6 3,158,719 - CA264_13525 0.70 +0.4 3,158,729 + CA264_13525 0.71 -0.5 3,158,811 - CA264_13525 0.79 +0.8 3,158,816 - CA264_13525 0.80 +0.0 3,158,886 + CA264_13525 0.87 +0.3 3,158,886 + CA264_13525 0.87 -0.0 3,158,887 - CA264_13525 0.87 +0.0 3,158,912 - CA264_13525 0.90 +0.4 3,159,020 + -0.2 3,159,037 + -0.1 3,159,042 - +0.3 3,159,070 + +0.4 3,159,104 + -0.5 3,159,131 - -1.3 3,159,135 + +1.0 3,159,136 - -0.6 3,159,140 + +0.1 3,159,141 - +0.1 3,159,148 + -0.6 3,159,166 + -0.3 3,159,171 + +0.1 3,159,195 + -0.1 3,159,207 - -0.1 3,159,220 - -0.9 3,159,220 - -0.4 3,159,225 + +0.0 3,159,225 + -0.1 3,159,248 - -0.7 3,159,273 - -0.7 3,159,329 + -0.1 3,159,359 + CA264_13530 0.12 -0.1 3,159,369 - CA264_13530 0.13 -0.2 3,159,403 + CA264_13530 0.17 +0.4 3,159,404 - CA264_13530 0.17 -0.6 3,159,404 - CA264_13530 0.17 +0.4 3,159,572 + CA264_13530 0.35 -0.1 3,159,651 + CA264_13530 0.44 +2.0 3,159,651 + CA264_13530 0.44 -0.4 3,159,652 - CA264_13530 0.44 -0.3 3,159,654 - CA264_13530 0.44 +0.0 3,159,698 + CA264_13530 0.49 -0.1 3,159,706 + CA264_13530 0.49 +0.3 3,159,707 - CA264_13530 0.50 +2.1 3,159,710 + CA264_13530 0.50 +0.1 3,159,729 + CA264_13530 0.52 +1.1 3,159,784 + CA264_13530 0.58 -0.2 3,159,874 - CA264_13530 0.68 -0.1 3,159,875 + CA264_13530 0.68 -0.3 3,159,881 + CA264_13530 0.68 -0.3 3,159,947 + CA264_13530 0.75 -2.2 3,159,996 - CA264_13530 0.81 -0.7
Or see this region's nucleotide sequence