Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_10780

Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_10775 and CA264_10780 are separated by 100 nucleotidesCA264_10780 and CA264_10785 overlap by 1 nucleotides CA264_10775: CA264_10775 - malonyl CoA-acyl carrier protein transacylase, at 2,489,345 to 2,490,220 _10775 CA264_10780: CA264_10780 - hypothetical protein, at 2,490,321 to 2,490,746 _10780 CA264_10785: CA264_10785 - hypothetical protein, at 2,490,746 to 2,493,337 _10785 Position (kb) 2490 2491Strain fitness (log2 ratio) -2 -1 0 1 2at 2489.321 kb on - strandat 2489.322 kb on + strandat 2489.322 kb on + strandat 2489.323 kb on - strandat 2489.328 kb on - strandat 2489.330 kb on - strandat 2489.378 kb on + strandat 2489.379 kb on - strandat 2490.262 kb on + strandat 2490.263 kb on - strandat 2490.443 kb on + strand, within CA264_10780at 2490.443 kb on + strand, within CA264_10780at 2490.462 kb on + strand, within CA264_10780at 2490.462 kb on + strand, within CA264_10780at 2490.521 kb on - strand, within CA264_10780at 2490.651 kb on + strand, within CA264_10780at 2490.714 kb on - strandat 2490.774 kb on + strandat 2490.790 kb on + strandat 2490.790 kb on + strandat 2490.790 kb on + strandat 2490.790 kb on + strandat 2490.790 kb on + strandat 2490.800 kb on + strandat 2490.800 kb on + strandat 2490.800 kb on + strandat 2490.801 kb on - strandat 2490.805 kb on + strandat 2490.807 kb on + strandat 2490.807 kb on + strandat 2490.808 kb on - strandat 2490.828 kb on + strandat 2490.831 kb on + strandat 2490.831 kb on + strandat 2490.834 kb on + strandat 2490.834 kb on + strandat 2490.835 kb on - strandat 2490.835 kb on - strandat 2490.835 kb on - strandat 2490.848 kb on - strandat 2490.884 kb on - strandat 2490.884 kb on - strandat 2490.888 kb on + strandat 2490.889 kb on - strandat 2491.043 kb on + strand, within CA264_10785at 2491.045 kb on + strand, within CA264_10785at 2491.054 kb on + strand, within CA264_10785at 2491.055 kb on - strand, within CA264_10785at 2491.060 kb on + strand, within CA264_10785at 2491.061 kb on - strand, within CA264_10785at 2491.066 kb on + strand, within CA264_10785at 2491.067 kb on - strand, within CA264_10785at 2491.067 kb on - strand, within CA264_10785at 2491.125 kb on + strand, within CA264_10785at 2491.126 kb on - strand, within CA264_10785at 2491.162 kb on - strand, within CA264_10785at 2491.218 kb on + strand, within CA264_10785at 2491.219 kb on - strand, within CA264_10785at 2491.219 kb on - strand, within CA264_10785at 2491.219 kb on - strand, within CA264_10785at 2491.221 kb on + strand, within CA264_10785at 2491.222 kb on - strand, within CA264_10785at 2491.222 kb on - strand, within CA264_10785at 2491.222 kb on - strand, within CA264_10785at 2491.223 kb on + strand, within CA264_10785at 2491.223 kb on + strand, within CA264_10785at 2491.223 kb on + strand, within CA264_10785at 2491.223 kb on + strand, within CA264_10785at 2491.223 kb on + strand, within CA264_10785at 2491.224 kb on - strand, within CA264_10785at 2491.224 kb on - strand, within CA264_10785at 2491.230 kb on + strand, within CA264_10785at 2491.231 kb on - strand, within CA264_10785at 2491.385 kb on - strand, within CA264_10785at 2491.385 kb on - strand, within CA264_10785at 2491.388 kb on + strand, within CA264_10785at 2491.388 kb on + strand, within CA264_10785at 2491.389 kb on - strand, within CA264_10785at 2491.389 kb on - strand, within CA264_10785at 2491.389 kb on - strand, within CA264_10785at 2491.459 kb on - strand, within CA264_10785at 2491.461 kb on + strand, within CA264_10785at 2491.461 kb on + strand, within CA264_10785at 2491.462 kb on - strand, within CA264_10785at 2491.462 kb on - strand, within CA264_10785at 2491.462 kb on - strand, within CA264_10785at 2491.467 kb on + strand, within CA264_10785at 2491.518 kb on + strand, within CA264_10785at 2491.518 kb on + strand, within CA264_10785at 2491.519 kb on - strand, within CA264_10785at 2491.584 kb on + strand, within CA264_10785at 2491.588 kb on + strand, within CA264_10785at 2491.588 kb on + strand, within CA264_10785at 2491.588 kb on + strand, within CA264_10785at 2491.589 kb on - strand, within CA264_10785at 2491.589 kb on - strand, within CA264_10785at 2491.589 kb on - strand, within CA264_10785at 2491.589 kb on - strand, within CA264_10785at 2491.590 kb on + strand, within CA264_10785at 2491.590 kb on + strand, within CA264_10785at 2491.626 kb on + strand, within CA264_10785at 2491.627 kb on - strand, within CA264_10785at 2491.673 kb on + strand, within CA264_10785at 2491.679 kb on + strand, within CA264_10785at 2491.680 kb on - strand, within CA264_10785at 2491.680 kb on - strand, within CA264_10785at 2491.683 kb on + strand, within CA264_10785at 2491.684 kb on - strand, within CA264_10785

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol%
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2,489,321 - -1.5
2,489,322 + -0.0
2,489,322 + -0.4
2,489,323 - -0.0
2,489,328 - -0.2
2,489,330 - -1.2
2,489,378 + -0.5
2,489,379 - +0.2
2,490,262 + +0.9
2,490,263 - +0.0
2,490,443 + CA264_10780 0.29 -0.6
2,490,443 + CA264_10780 0.29 -0.7
2,490,462 + CA264_10780 0.33 -1.0
2,490,462 + CA264_10780 0.33 +0.0
2,490,521 - CA264_10780 0.47 -0.7
2,490,651 + CA264_10780 0.77 +0.7
2,490,714 - -0.1
2,490,774 + -0.3
2,490,790 + -0.2
2,490,790 + +1.0
2,490,790 + -0.1
2,490,790 + -0.2
2,490,790 + +0.5
2,490,800 + -0.1
2,490,800 + -0.7
2,490,800 + -0.2
2,490,801 - -1.1
2,490,805 + +0.2
2,490,807 + -1.4
2,490,807 + -1.0
2,490,808 - -0.9
2,490,828 + +0.3
2,490,831 + +0.8
2,490,831 + +1.4
2,490,834 + -0.7
2,490,834 + -2.1
2,490,835 - -0.7
2,490,835 - -0.1
2,490,835 - -0.0
2,490,848 - -0.9
2,490,884 - -0.4
2,490,884 - +0.3
2,490,888 + +0.3
2,490,889 - +0.0
2,491,043 + CA264_10785 0.11 +0.9
2,491,045 + CA264_10785 0.12 -0.6
2,491,054 + CA264_10785 0.12 +0.5
2,491,055 - CA264_10785 0.12 -0.2
2,491,060 + CA264_10785 0.12 +0.0
2,491,061 - CA264_10785 0.12 -0.2
2,491,066 + CA264_10785 0.12 +0.1
2,491,067 - CA264_10785 0.12 -0.4
2,491,067 - CA264_10785 0.12 -1.1
2,491,125 + CA264_10785 0.15 +0.1
2,491,126 - CA264_10785 0.15 -1.2
2,491,162 - CA264_10785 0.16 +1.9
2,491,218 + CA264_10785 0.18 +0.7
2,491,219 - CA264_10785 0.18 +0.5
2,491,219 - CA264_10785 0.18 +0.9
2,491,219 - CA264_10785 0.18 -0.6
2,491,221 + CA264_10785 0.18 +0.2
2,491,222 - CA264_10785 0.18 +0.6
2,491,222 - CA264_10785 0.18 +0.3
2,491,222 - CA264_10785 0.18 -0.5
2,491,223 + CA264_10785 0.18 +0.1
2,491,223 + CA264_10785 0.18 +0.8
2,491,223 + CA264_10785 0.18 -0.1
2,491,223 + CA264_10785 0.18 -1.9
2,491,223 + CA264_10785 0.18 -0.5
2,491,224 - CA264_10785 0.18 +0.1
2,491,224 - CA264_10785 0.18 -0.9
2,491,230 + CA264_10785 0.19 +0.7
2,491,231 - CA264_10785 0.19 -0.0
2,491,385 - CA264_10785 0.25 +2.0
2,491,385 - CA264_10785 0.25 -0.5
2,491,388 + CA264_10785 0.25 +0.4
2,491,388 + CA264_10785 0.25 +0.4
2,491,389 - CA264_10785 0.25 -1.2
2,491,389 - CA264_10785 0.25 +0.1
2,491,389 - CA264_10785 0.25 +0.7
2,491,459 - CA264_10785 0.28 -0.9
2,491,461 + CA264_10785 0.28 -1.7
2,491,461 + CA264_10785 0.28 -0.5
2,491,462 - CA264_10785 0.28 -0.2
2,491,462 - CA264_10785 0.28 -0.7
2,491,462 - CA264_10785 0.28 -1.0
2,491,467 + CA264_10785 0.28 -0.1
2,491,518 + CA264_10785 0.30 +0.2
2,491,518 + CA264_10785 0.30 +0.3
2,491,519 - CA264_10785 0.30 -0.5
2,491,584 + CA264_10785 0.32 -0.4
2,491,588 + CA264_10785 0.32 -0.5
2,491,588 + CA264_10785 0.32 -0.8
2,491,588 + CA264_10785 0.32 +0.7
2,491,589 - CA264_10785 0.33 +1.5
2,491,589 - CA264_10785 0.33 -0.6
2,491,589 - CA264_10785 0.33 -0.2
2,491,589 - CA264_10785 0.33 -0.4
2,491,590 + CA264_10785 0.33 -0.8
2,491,590 + CA264_10785 0.33 +0.0
2,491,626 + CA264_10785 0.34 +1.3
2,491,627 - CA264_10785 0.34 -0.2
2,491,673 + CA264_10785 0.36 -1.5
2,491,679 + CA264_10785 0.36 -0.4
2,491,680 - CA264_10785 0.36 -1.7
2,491,680 - CA264_10785 0.36 +0.3
2,491,683 + CA264_10785 0.36 +0.2
2,491,684 - CA264_10785 0.36 -0.3

Or see this region's nucleotide sequence