Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10440 and CA264_10445 are separated by 98 nucleotides CA264_10445 and CA264_10450 are separated by 94 nucleotides
CA264_10440: CA264_10440 - LysR family transcriptional regulator, at 2,424,053 to 2,424,946
_10440
CA264_10445: CA264_10445 - hypothetical protein, at 2,425,045 to 2,425,299
_10445
CA264_10450: CA264_10450 - N-acetyltransferase, at 2,425,394 to 2,425,921
_10450
Position (kb)
2425
2426 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2424.054 kb on + strand at 2424.054 kb on + strand at 2424.055 kb on - strand at 2424.072 kb on + strand at 2424.072 kb on + strand at 2424.125 kb on - strand at 2424.165 kb on + strand, within CA264_10440 at 2424.166 kb on - strand, within CA264_10440 at 2424.177 kb on - strand, within CA264_10440 at 2424.202 kb on + strand, within CA264_10440 at 2424.203 kb on - strand, within CA264_10440 at 2424.210 kb on + strand, within CA264_10440 at 2424.216 kb on + strand, within CA264_10440 at 2424.221 kb on + strand, within CA264_10440 at 2424.224 kb on + strand, within CA264_10440 at 2424.224 kb on + strand, within CA264_10440 at 2424.224 kb on + strand, within CA264_10440 at 2424.224 kb on + strand, within CA264_10440 at 2424.224 kb on + strand, within CA264_10440 at 2424.224 kb on + strand, within CA264_10440 at 2424.225 kb on - strand, within CA264_10440 at 2424.225 kb on - strand, within CA264_10440 at 2424.225 kb on - strand, within CA264_10440 at 2424.225 kb on - strand, within CA264_10440 at 2424.397 kb on + strand, within CA264_10440 at 2424.397 kb on + strand, within CA264_10440 at 2424.466 kb on - strand, within CA264_10440 at 2424.482 kb on + strand, within CA264_10440 at 2424.531 kb on + strand, within CA264_10440 at 2424.532 kb on - strand, within CA264_10440 at 2424.532 kb on - strand, within CA264_10440 at 2424.597 kb on - strand, within CA264_10440 at 2424.723 kb on - strand, within CA264_10440 at 2424.740 kb on + strand, within CA264_10440 at 2424.813 kb on - strand, within CA264_10440 at 2424.929 kb on + strand at 2424.930 kb on - strand at 2424.982 kb on + strand at 2424.996 kb on + strand at 2425.059 kb on + strand at 2425.059 kb on + strand at 2425.059 kb on + strand at 2425.059 kb on + strand at 2425.059 kb on + strand at 2425.060 kb on - strand at 2425.060 kb on - strand at 2425.060 kb on - strand at 2425.063 kb on + strand at 2425.063 kb on + strand at 2425.063 kb on + strand at 2425.065 kb on + strand at 2425.066 kb on - strand at 2425.125 kb on + strand, within CA264_10445 at 2425.126 kb on - strand, within CA264_10445 at 2425.175 kb on + strand, within CA264_10445 at 2425.175 kb on + strand, within CA264_10445 at 2425.266 kb on - strand, within CA264_10445 at 2425.285 kb on + strand at 2425.292 kb on + strand at 2425.292 kb on + strand at 2425.332 kb on + strand at 2425.333 kb on - strand at 2425.336 kb on + strand at 2425.336 kb on + strand at 2425.352 kb on + strand at 2425.366 kb on - strand at 2425.368 kb on + strand at 2425.368 kb on + strand at 2425.368 kb on + strand at 2425.368 kb on + strand at 2425.369 kb on - strand at 2425.369 kb on - strand at 2425.372 kb on - strand at 2425.378 kb on + strand at 2425.378 kb on + strand at 2425.379 kb on - strand at 2425.379 kb on - strand at 2425.410 kb on + strand at 2425.410 kb on + strand at 2425.410 kb on + strand at 2425.411 kb on - strand at 2425.493 kb on - strand, within CA264_10450 at 2425.580 kb on + strand, within CA264_10450 at 2425.614 kb on - strand, within CA264_10450 at 2425.623 kb on + strand, within CA264_10450 at 2425.675 kb on - strand, within CA264_10450 at 2425.685 kb on + strand, within CA264_10450 at 2425.685 kb on + strand, within CA264_10450 at 2425.692 kb on + strand, within CA264_10450 at 2425.714 kb on + strand, within CA264_10450 at 2425.774 kb on + strand, within CA264_10450 at 2425.782 kb on + strand, within CA264_10450 at 2425.888 kb on + strand at 2425.889 kb on - strand at 2425.890 kb on + strand at 2425.890 kb on + strand at 2425.891 kb on - strand at 2425.891 kb on - strand at 2425.970 kb on + strand at 2426.075 kb on + strand at 2426.077 kb on + strand at 2426.086 kb on + strand at 2426.087 kb on - strand at 2426.093 kb on - strand at 2426.153 kb on - strand at 2426.197 kb on + strand at 2426.197 kb on + strand at 2426.210 kb on + strand at 2426.211 kb on - strand at 2426.214 kb on + strand at 2426.214 kb on + strand at 2426.214 kb on + strand at 2426.215 kb on - strand at 2426.221 kb on + strand at 2426.222 kb on - strand at 2426.228 kb on + strand at 2426.229 kb on - strand at 2426.229 kb on - strand at 2426.232 kb on + strand at 2426.232 kb on + strand at 2426.233 kb on - strand at 2426.233 kb on - strand at 2426.293 kb on + strand at 2426.299 kb on + strand at 2426.299 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 2,424,054 + -0.4 2,424,054 + +0.3 2,424,055 - -0.8 2,424,072 + +0.0 2,424,072 + +0.5 2,424,125 - +0.2 2,424,165 + CA264_10440 0.13 +0.3 2,424,166 - CA264_10440 0.13 -0.7 2,424,177 - CA264_10440 0.14 +0.1 2,424,202 + CA264_10440 0.17 -3.2 2,424,203 - CA264_10440 0.17 -1.0 2,424,210 + CA264_10440 0.18 +0.2 2,424,216 + CA264_10440 0.18 -0.4 2,424,221 + CA264_10440 0.19 +1.3 2,424,224 + CA264_10440 0.19 -0.4 2,424,224 + CA264_10440 0.19 -0.9 2,424,224 + CA264_10440 0.19 -0.2 2,424,224 + CA264_10440 0.19 -0.4 2,424,224 + CA264_10440 0.19 -0.4 2,424,224 + CA264_10440 0.19 +0.9 2,424,225 - CA264_10440 0.19 -1.8 2,424,225 - CA264_10440 0.19 -0.7 2,424,225 - CA264_10440 0.19 +0.7 2,424,225 - CA264_10440 0.19 +0.4 2,424,397 + CA264_10440 0.38 -0.4 2,424,397 + CA264_10440 0.38 +0.7 2,424,466 - CA264_10440 0.46 +1.3 2,424,482 + CA264_10440 0.48 +0.4 2,424,531 + CA264_10440 0.53 -0.0 2,424,532 - CA264_10440 0.54 -0.7 2,424,532 - CA264_10440 0.54 -0.5 2,424,597 - CA264_10440 0.61 -1.3 2,424,723 - CA264_10440 0.75 -0.5 2,424,740 + CA264_10440 0.77 +1.5 2,424,813 - CA264_10440 0.85 -0.2 2,424,929 + -0.6 2,424,930 - -0.2 2,424,982 + -1.6 2,424,996 + +0.2 2,425,059 + -1.4 2,425,059 + -0.1 2,425,059 + -0.2 2,425,059 + -0.7 2,425,059 + +0.2 2,425,060 - +0.4 2,425,060 - -0.1 2,425,060 - +0.9 2,425,063 + +0.1 2,425,063 + -0.1 2,425,063 + -0.2 2,425,065 + -0.2 2,425,066 - +0.4 2,425,125 + CA264_10445 0.31 -0.3 2,425,126 - CA264_10445 0.32 -0.3 2,425,175 + CA264_10445 0.51 -0.4 2,425,175 + CA264_10445 0.51 -0.1 2,425,266 - CA264_10445 0.87 -0.7 2,425,285 + -0.4 2,425,292 + +0.0 2,425,292 + +0.9 2,425,332 + -0.4 2,425,333 - -0.3 2,425,336 + -0.0 2,425,336 + -1.6 2,425,352 + -0.4 2,425,366 - -0.1 2,425,368 + +0.9 2,425,368 + +0.1 2,425,368 + -0.1 2,425,368 + -1.2 2,425,369 - +0.8 2,425,369 - -0.6 2,425,372 - -0.5 2,425,378 + -0.3 2,425,378 + -0.3 2,425,379 - +0.0 2,425,379 - -0.3 2,425,410 + -0.1 2,425,410 + +0.4 2,425,410 + -0.1 2,425,411 - -0.1 2,425,493 - CA264_10450 0.19 -0.3 2,425,580 + CA264_10450 0.35 -0.1 2,425,614 - CA264_10450 0.42 -0.1 2,425,623 + CA264_10450 0.43 +0.1 2,425,675 - CA264_10450 0.53 -1.2 2,425,685 + CA264_10450 0.55 +1.7 2,425,685 + CA264_10450 0.55 -0.4 2,425,692 + CA264_10450 0.56 -1.0 2,425,714 + CA264_10450 0.61 +0.6 2,425,774 + CA264_10450 0.72 -0.1 2,425,782 + CA264_10450 0.73 +0.1 2,425,888 + -0.0 2,425,889 - +0.1 2,425,890 + -0.6 2,425,890 + -1.3 2,425,891 - +1.8 2,425,891 - -0.1 2,425,970 + -0.4 2,426,075 + -0.1 2,426,077 + -2.4 2,426,086 + -0.8 2,426,087 - +0.2 2,426,093 - -0.5 2,426,153 - +0.7 2,426,197 + -0.5 2,426,197 + -0.3 2,426,210 + -0.5 2,426,211 - +0.3 2,426,214 + -0.5 2,426,214 + +0.5 2,426,214 + +0.0 2,426,215 - +0.2 2,426,221 + -1.0 2,426,222 - +0.8 2,426,228 + -0.2 2,426,229 - -0.2 2,426,229 - -0.0 2,426,232 + -0.3 2,426,232 + +0.3 2,426,233 - -0.0 2,426,233 - -0.2 2,426,293 + +1.0 2,426,299 + -0.7 2,426,299 + +0.5
Or see this region's nucleotide sequence