Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08365 and CA264_08370 are separated by 749 nucleotides CA264_08370 and CA264_08375 are separated by 62 nucleotides CA264_08375 and CA264_08380 are separated by 3 nucleotides
CA264_08365: CA264_08365 - hypothetical protein, at 1,932,531 to 1,933,166
_08365
CA264_08370: CA264_08370 - WYL domain-containing protein, at 1,933,916 to 1,934,854
_08370
CA264_08375: CA264_08375 - CRISPR-associated protein Cas6, at 1,934,917 to 1,935,591
_08375
CA264_08380: CA264_08380 - hypothetical protein, at 1,935,595 to 1,936,395
_08380
Position (kb)
1933
1934
1935 Strain fitness (log2 ratio)
-2
-1
0
1 at 1932.916 kb on + strand, within CA264_08365 at 1932.943 kb on + strand, within CA264_08365 at 1933.003 kb on + strand, within CA264_08365 at 1933.020 kb on + strand, within CA264_08365 at 1933.020 kb on + strand, within CA264_08365 at 1933.021 kb on - strand, within CA264_08365 at 1933.076 kb on + strand, within CA264_08365 at 1933.077 kb on - strand, within CA264_08365 at 1933.088 kb on + strand, within CA264_08365 at 1933.155 kb on - strand at 1933.155 kb on - strand at 1933.180 kb on - strand at 1933.181 kb on + strand at 1933.182 kb on - strand at 1933.198 kb on + strand at 1933.198 kb on + strand at 1933.198 kb on + strand at 1933.199 kb on - strand at 1933.270 kb on - strand at 1933.293 kb on + strand at 1933.299 kb on - strand at 1933.305 kb on - strand at 1933.329 kb on - strand at 1933.357 kb on - strand at 1933.373 kb on - strand at 1933.373 kb on - strand at 1933.373 kb on - strand at 1933.375 kb on + strand at 1933.376 kb on - strand at 1933.376 kb on - strand at 1933.376 kb on - strand at 1933.386 kb on + strand at 1933.720 kb on + strand at 1933.721 kb on - strand at 1933.752 kb on + strand at 1933.753 kb on - strand at 1933.772 kb on + strand at 1933.800 kb on + strand at 1933.829 kb on - strand at 1933.829 kb on - strand at 1933.831 kb on + strand at 1933.832 kb on - strand at 1933.915 kb on + strand at 1933.927 kb on + strand at 1933.927 kb on + strand at 1933.930 kb on + strand at 1933.930 kb on + strand at 1933.931 kb on - strand at 1933.947 kb on + strand at 1933.947 kb on + strand at 1933.947 kb on + strand at 1934.098 kb on + strand, within CA264_08370 at 1934.099 kb on - strand, within CA264_08370 at 1934.102 kb on + strand, within CA264_08370 at 1934.123 kb on + strand, within CA264_08370 at 1934.123 kb on + strand, within CA264_08370 at 1934.124 kb on - strand, within CA264_08370 at 1934.124 kb on - strand, within CA264_08370 at 1934.247 kb on - strand, within CA264_08370 at 1934.342 kb on + strand, within CA264_08370 at 1934.383 kb on - strand, within CA264_08370 at 1934.383 kb on - strand, within CA264_08370 at 1934.383 kb on - strand, within CA264_08370 at 1934.421 kb on - strand, within CA264_08370 at 1934.628 kb on - strand, within CA264_08370 at 1934.633 kb on - strand, within CA264_08370 at 1934.633 kb on - strand, within CA264_08370 at 1934.633 kb on - strand, within CA264_08370 at 1934.739 kb on + strand, within CA264_08370 at 1934.740 kb on - strand, within CA264_08370 at 1934.740 kb on - strand, within CA264_08370 at 1934.916 kb on + strand at 1934.931 kb on + strand at 1934.944 kb on - strand at 1935.060 kb on - strand, within CA264_08375 at 1935.128 kb on - strand, within CA264_08375 at 1935.128 kb on - strand, within CA264_08375 at 1935.128 kb on - strand, within CA264_08375 at 1935.139 kb on + strand, within CA264_08375 at 1935.146 kb on + strand, within CA264_08375 at 1935.162 kb on + strand, within CA264_08375 at 1935.164 kb on + strand, within CA264_08375 at 1935.165 kb on - strand, within CA264_08375 at 1935.213 kb on - strand, within CA264_08375 at 1935.272 kb on + strand, within CA264_08375 at 1935.286 kb on - strand, within CA264_08375 at 1935.296 kb on + strand, within CA264_08375 at 1935.451 kb on - strand, within CA264_08375 at 1935.464 kb on + strand, within CA264_08375 at 1935.465 kb on - strand, within CA264_08375 at 1935.481 kb on - strand, within CA264_08375 at 1935.490 kb on - strand, within CA264_08375 at 1935.490 kb on - strand, within CA264_08375 at 1935.490 kb on - strand, within CA264_08375 at 1935.507 kb on - strand, within CA264_08375 at 1935.522 kb on + strand, within CA264_08375 at 1935.562 kb on - strand at 1935.637 kb on + strand at 1935.671 kb on + strand at 1935.671 kb on + strand at 1935.706 kb on - strand, within CA264_08380 at 1935.843 kb on + strand, within CA264_08380
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 1,932,916 + CA264_08365 0.61 -0.6 1,932,943 + CA264_08365 0.65 -1.2 1,933,003 + CA264_08365 0.74 -0.1 1,933,020 + CA264_08365 0.77 -1.1 1,933,020 + CA264_08365 0.77 -0.1 1,933,021 - CA264_08365 0.77 +0.7 1,933,076 + CA264_08365 0.86 -1.5 1,933,077 - CA264_08365 0.86 -0.5 1,933,088 + CA264_08365 0.88 -0.4 1,933,155 - -0.4 1,933,155 - -1.0 1,933,180 - +0.1 1,933,181 + -1.1 1,933,182 - -1.6 1,933,198 + -0.9 1,933,198 + -1.8 1,933,198 + -1.7 1,933,199 - +0.3 1,933,270 - +0.4 1,933,293 + -2.5 1,933,299 - -0.6 1,933,305 - -0.6 1,933,329 - -0.8 1,933,357 - -0.3 1,933,373 - -0.1 1,933,373 - -0.5 1,933,373 - -0.3 1,933,375 + -1.5 1,933,376 - -0.8 1,933,376 - -0.6 1,933,376 - -0.4 1,933,386 + +0.5 1,933,720 + -0.7 1,933,721 - -0.4 1,933,752 + -1.0 1,933,753 - -0.3 1,933,772 + -1.3 1,933,800 + -1.0 1,933,829 - -1.4 1,933,829 - -2.0 1,933,831 + -1.6 1,933,832 - -1.1 1,933,915 + -0.4 1,933,927 + +0.1 1,933,927 + +0.3 1,933,930 + -0.5 1,933,930 + -0.8 1,933,931 - -0.4 1,933,947 + -0.5 1,933,947 + +0.3 1,933,947 + -0.6 1,934,098 + CA264_08370 0.19 -0.6 1,934,099 - CA264_08370 0.19 -2.0 1,934,102 + CA264_08370 0.20 -1.0 1,934,123 + CA264_08370 0.22 -0.8 1,934,123 + CA264_08370 0.22 +0.6 1,934,124 - CA264_08370 0.22 -1.2 1,934,124 - CA264_08370 0.22 -0.3 1,934,247 - CA264_08370 0.35 -0.3 1,934,342 + CA264_08370 0.45 -1.4 1,934,383 - CA264_08370 0.50 -0.4 1,934,383 - CA264_08370 0.50 +0.4 1,934,383 - CA264_08370 0.50 -1.3 1,934,421 - CA264_08370 0.54 -0.4 1,934,628 - CA264_08370 0.76 -0.7 1,934,633 - CA264_08370 0.76 -1.0 1,934,633 - CA264_08370 0.76 -0.9 1,934,633 - CA264_08370 0.76 -0.9 1,934,739 + CA264_08370 0.88 -1.3 1,934,740 - CA264_08370 0.88 -0.4 1,934,740 - CA264_08370 0.88 -0.8 1,934,916 + -0.8 1,934,931 + -0.6 1,934,944 - -0.9 1,935,060 - CA264_08375 0.21 -0.5 1,935,128 - CA264_08375 0.31 -0.8 1,935,128 - CA264_08375 0.31 +0.4 1,935,128 - CA264_08375 0.31 -0.4 1,935,139 + CA264_08375 0.33 +0.1 1,935,146 + CA264_08375 0.34 -0.4 1,935,162 + CA264_08375 0.36 +0.0 1,935,164 + CA264_08375 0.37 -1.3 1,935,165 - CA264_08375 0.37 -0.5 1,935,213 - CA264_08375 0.44 -0.3 1,935,272 + CA264_08375 0.53 -2.6 1,935,286 - CA264_08375 0.55 -0.7 1,935,296 + CA264_08375 0.56 -0.6 1,935,451 - CA264_08375 0.79 +0.9 1,935,464 + CA264_08375 0.81 -0.4 1,935,465 - CA264_08375 0.81 -0.6 1,935,481 - CA264_08375 0.84 -0.1 1,935,490 - CA264_08375 0.85 -0.1 1,935,490 - CA264_08375 0.85 -0.8 1,935,490 - CA264_08375 0.85 +0.4 1,935,507 - CA264_08375 0.87 +0.4 1,935,522 + CA264_08375 0.90 +1.4 1,935,562 - +0.1 1,935,637 + -1.4 1,935,671 + -1.3 1,935,671 + +0.0 1,935,706 - CA264_08380 0.14 +0.4 1,935,843 + CA264_08380 0.31 -0.5
Or see this region's nucleotide sequence