Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_06275

Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_06270 and CA264_06275 are separated by 131 nucleotidesCA264_06275 and CA264_06280 are separated by 910 nucleotides CA264_06270: CA264_06270 - aspartate aminotransferase, at 1,457,939 to 1,459,195 _06270 CA264_06275: CA264_06275 - chloride channel protein, at 1,459,327 to 1,460,670 _06275 CA264_06280: CA264_06280 - sodium:solute symporter, at 1,461,581 to 1,463,320 _06280 Position (kb) 1459 1460 1461Strain fitness (log2 ratio) -2 -1 0 1at 1458.370 kb on + strand, within CA264_06270at 1458.370 kb on + strand, within CA264_06270at 1458.371 kb on - strand, within CA264_06270at 1458.403 kb on + strand, within CA264_06270at 1458.404 kb on - strand, within CA264_06270at 1458.413 kb on + strand, within CA264_06270at 1458.434 kb on + strand, within CA264_06270at 1458.434 kb on + strand, within CA264_06270at 1458.435 kb on - strand, within CA264_06270at 1458.435 kb on - strand, within CA264_06270at 1458.546 kb on - strand, within CA264_06270at 1458.546 kb on - strand, within CA264_06270at 1458.603 kb on + strand, within CA264_06270at 1458.666 kb on + strand, within CA264_06270at 1458.678 kb on + strand, within CA264_06270at 1458.687 kb on - strand, within CA264_06270at 1458.707 kb on + strand, within CA264_06270at 1458.854 kb on - strand, within CA264_06270at 1458.854 kb on - strand, within CA264_06270at 1458.864 kb on + strand, within CA264_06270at 1458.864 kb on + strand, within CA264_06270at 1458.865 kb on - strand, within CA264_06270at 1458.875 kb on + strand, within CA264_06270at 1458.876 kb on - strand, within CA264_06270at 1458.945 kb on + strand, within CA264_06270at 1458.949 kb on - strand, within CA264_06270at 1458.992 kb on - strand, within CA264_06270at 1458.992 kb on - strand, within CA264_06270at 1459.157 kb on - strandat 1459.225 kb on + strandat 1459.243 kb on + strandat 1459.276 kb on + strandat 1459.391 kb on + strandat 1459.431 kb on - strandat 1459.484 kb on + strand, within CA264_06275at 1459.484 kb on + strand, within CA264_06275at 1459.533 kb on + strand, within CA264_06275at 1459.533 kb on + strand, within CA264_06275at 1459.534 kb on - strand, within CA264_06275at 1459.646 kb on + strand, within CA264_06275at 1459.661 kb on - strand, within CA264_06275at 1459.693 kb on - strand, within CA264_06275at 1459.785 kb on - strand, within CA264_06275at 1459.785 kb on - strand, within CA264_06275at 1459.788 kb on + strand, within CA264_06275at 1459.788 kb on + strand, within CA264_06275at 1459.788 kb on + strand, within CA264_06275at 1459.788 kb on + strand, within CA264_06275at 1459.788 kb on + strand, within CA264_06275at 1459.789 kb on - strand, within CA264_06275at 1459.795 kb on - strand, within CA264_06275at 1459.795 kb on - strand, within CA264_06275at 1459.873 kb on - strand, within CA264_06275at 1459.952 kb on + strand, within CA264_06275at 1459.953 kb on - strand, within CA264_06275at 1459.997 kb on + strand, within CA264_06275at 1459.998 kb on - strand, within CA264_06275at 1460.031 kb on + strand, within CA264_06275at 1460.031 kb on + strand, within CA264_06275at 1460.031 kb on + strand, within CA264_06275at 1460.033 kb on + strand, within CA264_06275at 1460.034 kb on - strand, within CA264_06275at 1460.379 kb on + strand, within CA264_06275at 1460.379 kb on + strand, within CA264_06275at 1460.408 kb on + strand, within CA264_06275at 1460.414 kb on + strand, within CA264_06275at 1460.425 kb on + strand, within CA264_06275at 1460.488 kb on + strand, within CA264_06275at 1460.569 kb on + strandat 1460.576 kb on + strandat 1460.687 kb on + strandat 1460.688 kb on - strandat 1460.688 kb on - strandat 1460.703 kb on + strandat 1460.704 kb on - strandat 1460.705 kb on + strandat 1460.706 kb on - strandat 1460.706 kb on - strandat 1460.764 kb on + strandat 1460.790 kb on - strandat 1460.860 kb on + strandat 1460.963 kb on + strandat 1460.963 kb on + strandat 1461.013 kb on + strandat 1461.015 kb on + strandat 1461.015 kb on + strandat 1461.026 kb on + strandat 1461.027 kb on - strandat 1461.066 kb on - strandat 1461.068 kb on + strandat 1461.069 kb on - strandat 1461.075 kb on - strandat 1461.117 kb on + strandat 1461.117 kb on + strandat 1461.137 kb on - strandat 1461.188 kb on + strandat 1461.237 kb on + strandat 1461.244 kb on - strandat 1461.244 kb on - strandat 1461.272 kb on + strandat 1461.272 kb on + strandat 1461.276 kb on + strandat 1461.277 kb on - strandat 1461.371 kb on + strandat 1461.372 kb on - strandat 1461.372 kb on - strandat 1461.375 kb on - strandat 1461.375 kb on - strandat 1461.379 kb on - strandat 1461.515 kb on + strandat 1461.516 kb on - strandat 1461.535 kb on - strandat 1461.568 kb on - strandat 1461.587 kb on + strandat 1461.587 kb on + strandat 1461.598 kb on - strandat 1461.615 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol%
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1,458,370 + CA264_06270 0.34 -0.0
1,458,370 + CA264_06270 0.34 +1.2
1,458,371 - CA264_06270 0.34 -0.3
1,458,403 + CA264_06270 0.37 -0.2
1,458,404 - CA264_06270 0.37 -0.5
1,458,413 + CA264_06270 0.38 -0.4
1,458,434 + CA264_06270 0.39 +0.3
1,458,434 + CA264_06270 0.39 +0.0
1,458,435 - CA264_06270 0.39 +0.3
1,458,435 - CA264_06270 0.39 +0.2
1,458,546 - CA264_06270 0.48 +0.2
1,458,546 - CA264_06270 0.48 +0.2
1,458,603 + CA264_06270 0.53 -0.7
1,458,666 + CA264_06270 0.58 -0.6
1,458,678 + CA264_06270 0.59 -0.3
1,458,687 - CA264_06270 0.60 -0.7
1,458,707 + CA264_06270 0.61 +0.2
1,458,854 - CA264_06270 0.73 -0.4
1,458,854 - CA264_06270 0.73 -0.0
1,458,864 + CA264_06270 0.74 -0.6
1,458,864 + CA264_06270 0.74 -0.2
1,458,865 - CA264_06270 0.74 +0.1
1,458,875 + CA264_06270 0.74 -1.3
1,458,876 - CA264_06270 0.75 -0.7
1,458,945 + CA264_06270 0.80 -1.2
1,458,949 - CA264_06270 0.80 +0.0
1,458,992 - CA264_06270 0.84 +1.5
1,458,992 - CA264_06270 0.84 +0.4
1,459,157 - +0.9
1,459,225 + -0.9
1,459,243 + -1.6
1,459,276 + -0.2
1,459,391 + -0.8
1,459,431 - -0.1
1,459,484 + CA264_06275 0.12 -1.3
1,459,484 + CA264_06275 0.12 -0.6
1,459,533 + CA264_06275 0.15 -1.8
1,459,533 + CA264_06275 0.15 -0.4
1,459,534 - CA264_06275 0.15 -0.2
1,459,646 + CA264_06275 0.24 +0.2
1,459,661 - CA264_06275 0.25 -1.2
1,459,693 - CA264_06275 0.27 +0.9
1,459,785 - CA264_06275 0.34 -0.5
1,459,785 - CA264_06275 0.34 -0.1
1,459,788 + CA264_06275 0.34 -0.7
1,459,788 + CA264_06275 0.34 -1.0
1,459,788 + CA264_06275 0.34 -0.7
1,459,788 + CA264_06275 0.34 -0.8
1,459,788 + CA264_06275 0.34 -0.8
1,459,789 - CA264_06275 0.34 -0.4
1,459,795 - CA264_06275 0.35 -1.2
1,459,795 - CA264_06275 0.35 -0.1
1,459,873 - CA264_06275 0.41 +0.9
1,459,952 + CA264_06275 0.47 -0.4
1,459,953 - CA264_06275 0.47 -0.4
1,459,997 + CA264_06275 0.50 -0.6
1,459,998 - CA264_06275 0.50 -1.7
1,460,031 + CA264_06275 0.52 -1.2
1,460,031 + CA264_06275 0.52 -0.5
1,460,031 + CA264_06275 0.52 -1.0
1,460,033 + CA264_06275 0.53 -1.5
1,460,034 - CA264_06275 0.53 +0.1
1,460,379 + CA264_06275 0.78 -1.4
1,460,379 + CA264_06275 0.78 -0.5
1,460,408 + CA264_06275 0.80 -1.5
1,460,414 + CA264_06275 0.81 -0.3
1,460,425 + CA264_06275 0.82 -0.2
1,460,488 + CA264_06275 0.86 -0.4
1,460,569 + -0.7
1,460,576 + +0.7
1,460,687 + -1.0
1,460,688 - +0.4
1,460,688 - -0.0
1,460,703 + -0.8
1,460,704 - -0.6
1,460,705 + -0.2
1,460,706 - -1.3
1,460,706 - -0.2
1,460,764 + -1.4
1,460,790 - -0.1
1,460,860 + +0.2
1,460,963 + -0.1
1,460,963 + -2.1
1,461,013 + -1.2
1,461,015 + -1.0
1,461,015 + -1.5
1,461,026 + -0.8
1,461,027 - +0.2
1,461,066 - -1.2
1,461,068 + -1.5
1,461,069 - -0.7
1,461,075 - +0.2
1,461,117 + +1.6
1,461,117 + -0.8
1,461,137 - -2.4
1,461,188 + -1.1
1,461,237 + -0.9
1,461,244 - +0.3
1,461,244 - -0.3
1,461,272 + -1.3
1,461,272 + -0.8
1,461,276 + -1.5
1,461,277 - -0.9
1,461,371 + -2.1
1,461,372 - -0.8
1,461,372 - -1.8
1,461,375 - -0.6
1,461,375 - -0.4
1,461,379 - -0.9
1,461,515 + -1.5
1,461,516 - -0.5
1,461,535 - -0.1
1,461,568 - -1.5
1,461,587 + -1.1
1,461,587 + -0.6
1,461,598 - -1.0
1,461,615 - -0.3

Or see this region's nucleotide sequence