Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04360 and CA264_04365 are separated by 119 nucleotides CA264_04365 and CA264_04370 are separated by 108 nucleotides CA264_04370 and CA264_04375 are separated by 33 nucleotides
CA264_04360: CA264_04360 - transketolase, at 1,008,721 to 1,011,129
_04360
CA264_04365: CA264_04365 - hypothetical protein, at 1,011,249 to 1,011,782
_04365
CA264_04370: CA264_04370 - acyl transferase, at 1,011,891 to 1,012,856
_04370
CA264_04375: CA264_04375 - peptidase, at 1,012,890 to 1,013,804
_04375
Position (kb)
1011
1012
1013 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1011.117 kb on + strand at 1011.125 kb on - strand at 1011.125 kb on - strand at 1011.125 kb on - strand at 1011.125 kb on - strand at 1011.191 kb on + strand at 1011.204 kb on + strand at 1011.204 kb on + strand at 1011.222 kb on + strand at 1011.222 kb on + strand at 1011.222 kb on + strand at 1011.222 kb on + strand at 1011.223 kb on - strand at 1011.244 kb on + strand at 1011.245 kb on - strand at 1011.246 kb on + strand at 1011.247 kb on - strand at 1011.250 kb on + strand at 1011.320 kb on + strand, within CA264_04365 at 1011.321 kb on - strand, within CA264_04365 at 1011.468 kb on - strand, within CA264_04365 at 1011.468 kb on - strand, within CA264_04365 at 1011.505 kb on - strand, within CA264_04365 at 1011.505 kb on - strand, within CA264_04365 at 1011.505 kb on - strand, within CA264_04365 at 1011.507 kb on - strand, within CA264_04365 at 1011.670 kb on + strand, within CA264_04365 at 1011.670 kb on + strand, within CA264_04365 at 1011.692 kb on + strand, within CA264_04365 at 1011.712 kb on + strand, within CA264_04365 at 1011.713 kb on - strand, within CA264_04365 at 1011.713 kb on - strand, within CA264_04365 at 1011.754 kb on - strand at 1011.777 kb on + strand at 1011.785 kb on - strand at 1011.785 kb on - strand at 1012.069 kb on + strand, within CA264_04370 at 1012.174 kb on + strand, within CA264_04370 at 1012.219 kb on - strand, within CA264_04370 at 1012.326 kb on + strand, within CA264_04370 at 1012.327 kb on - strand, within CA264_04370 at 1012.555 kb on + strand, within CA264_04370 at 1012.580 kb on + strand, within CA264_04370 at 1012.580 kb on + strand, within CA264_04370 at 1012.581 kb on - strand, within CA264_04370 at 1012.581 kb on - strand, within CA264_04370 at 1012.644 kb on - strand, within CA264_04370 at 1012.720 kb on + strand, within CA264_04370 at 1012.721 kb on - strand, within CA264_04370 at 1012.855 kb on - strand at 1012.907 kb on + strand at 1013.040 kb on + strand, within CA264_04375 at 1013.125 kb on + strand, within CA264_04375 at 1013.126 kb on - strand, within CA264_04375 at 1013.126 kb on - strand, within CA264_04375 at 1013.208 kb on + strand, within CA264_04375 at 1013.257 kb on - strand, within CA264_04375 at 1013.258 kb on + strand, within CA264_04375 at 1013.258 kb on + strand, within CA264_04375 at 1013.258 kb on + strand, within CA264_04375 at 1013.325 kb on + strand, within CA264_04375 at 1013.326 kb on - strand, within CA264_04375 at 1013.330 kb on + strand, within CA264_04375 at 1013.330 kb on + strand, within CA264_04375 at 1013.395 kb on + strand, within CA264_04375 at 1013.395 kb on + strand, within CA264_04375 at 1013.395 kb on + strand, within CA264_04375 at 1013.395 kb on + strand, within CA264_04375 at 1013.395 kb on + strand, within CA264_04375 at 1013.395 kb on + strand, within CA264_04375 at 1013.396 kb on - strand, within CA264_04375 at 1013.396 kb on - strand, within CA264_04375 at 1013.495 kb on + strand, within CA264_04375 at 1013.496 kb on - strand, within CA264_04375 at 1013.496 kb on - strand, within CA264_04375 at 1013.509 kb on + strand, within CA264_04375 at 1013.509 kb on + strand, within CA264_04375 at 1013.547 kb on + strand, within CA264_04375 at 1013.651 kb on - strand, within CA264_04375 at 1013.772 kb on + strand at 1013.774 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 1,011,117 + -0.7 1,011,125 - +0.1 1,011,125 - -0.8 1,011,125 - +0.4 1,011,125 - +0.6 1,011,191 + +1.1 1,011,204 + -0.5 1,011,204 + -0.9 1,011,222 + +0.4 1,011,222 + -0.1 1,011,222 + +0.0 1,011,222 + +1.7 1,011,223 - -0.3 1,011,244 + -0.9 1,011,245 - -1.0 1,011,246 + +0.6 1,011,247 - -0.2 1,011,250 + +0.2 1,011,320 + CA264_04365 0.13 -0.5 1,011,321 - CA264_04365 0.13 +0.2 1,011,468 - CA264_04365 0.41 +0.4 1,011,468 - CA264_04365 0.41 -2.6 1,011,505 - CA264_04365 0.48 -0.6 1,011,505 - CA264_04365 0.48 +0.0 1,011,505 - CA264_04365 0.48 -0.2 1,011,507 - CA264_04365 0.48 -0.8 1,011,670 + CA264_04365 0.79 -1.4 1,011,670 + CA264_04365 0.79 +0.4 1,011,692 + CA264_04365 0.83 -0.2 1,011,712 + CA264_04365 0.87 -0.2 1,011,713 - CA264_04365 0.87 -0.3 1,011,713 - CA264_04365 0.87 +0.9 1,011,754 - -0.0 1,011,777 + -0.6 1,011,785 - -0.8 1,011,785 - +0.1 1,012,069 + CA264_04370 0.18 -0.4 1,012,174 + CA264_04370 0.29 -0.6 1,012,219 - CA264_04370 0.34 -0.8 1,012,326 + CA264_04370 0.45 -0.2 1,012,327 - CA264_04370 0.45 -1.1 1,012,555 + CA264_04370 0.69 -1.1 1,012,580 + CA264_04370 0.71 -0.5 1,012,580 + CA264_04370 0.71 -1.3 1,012,581 - CA264_04370 0.71 +0.3 1,012,581 - CA264_04370 0.71 +0.2 1,012,644 - CA264_04370 0.78 -0.0 1,012,720 + CA264_04370 0.86 -0.2 1,012,721 - CA264_04370 0.86 -0.7 1,012,855 - +0.1 1,012,907 + -0.4 1,013,040 + CA264_04375 0.16 +1.4 1,013,125 + CA264_04375 0.26 +0.1 1,013,126 - CA264_04375 0.26 +0.1 1,013,126 - CA264_04375 0.26 +1.0 1,013,208 + CA264_04375 0.35 +1.4 1,013,257 - CA264_04375 0.40 +0.1 1,013,258 + CA264_04375 0.40 -0.5 1,013,258 + CA264_04375 0.40 -0.1 1,013,258 + CA264_04375 0.40 -1.2 1,013,325 + CA264_04375 0.48 -1.9 1,013,326 - CA264_04375 0.48 -0.6 1,013,330 + CA264_04375 0.48 -0.9 1,013,330 + CA264_04375 0.48 -0.8 1,013,395 + CA264_04375 0.55 -0.4 1,013,395 + CA264_04375 0.55 -1.1 1,013,395 + CA264_04375 0.55 -0.7 1,013,395 + CA264_04375 0.55 +0.7 1,013,395 + CA264_04375 0.55 -0.5 1,013,395 + CA264_04375 0.55 +0.1 1,013,396 - CA264_04375 0.55 -0.1 1,013,396 - CA264_04375 0.55 +0.1 1,013,495 + CA264_04375 0.66 -0.3 1,013,496 - CA264_04375 0.66 +0.1 1,013,496 - CA264_04375 0.66 +3.0 1,013,509 + CA264_04375 0.68 -0.3 1,013,509 + CA264_04375 0.68 -0.8 1,013,547 + CA264_04375 0.72 -0.2 1,013,651 - CA264_04375 0.83 -0.4 1,013,772 + +0.6 1,013,774 + -0.4
Or see this region's nucleotide sequence