Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01975 and CA264_01980 are separated by 146 nucleotides CA264_01980 and CA264_01985 are separated by 212 nucleotides CA264_01985 and CA264_01990 are separated by 134 nucleotides CA264_01990 and CA264_01995 are separated by 73 nucleotides
CA264_01975: CA264_01975 - hypothetical protein, at 457,035 to 458,396
_01975
CA264_01980: CA264_01980 - hypothetical protein, at 458,543 to 459,172
_01980
CA264_01985: CA264_01985 - tRNA-Lys, at 459,385 to 459,460
_01985
CA264_01990: CA264_01990 - tRNA-Lys, at 459,595 to 459,670
_01990
CA264_01995: CA264_01995 - SH3 domain-containing protein, at 459,744 to 460,481
_01995
Position (kb) 458
459
460 Strain fitness (log2 ratio) -2
-1
0
1 at 457.550 kb on + strand, within CA264_01975 at 457.595 kb on + strand, within CA264_01975 at 457.708 kb on + strand, within CA264_01975 at 457.709 kb on - strand, within CA264_01975 at 457.713 kb on + strand, within CA264_01975 at 457.714 kb on - strand, within CA264_01975 at 457.892 kb on - strand, within CA264_01975 at 457.914 kb on + strand, within CA264_01975 at 457.915 kb on - strand, within CA264_01975 at 458.035 kb on + strand, within CA264_01975 at 458.035 kb on + strand, within CA264_01975 at 458.036 kb on - strand, within CA264_01975 at 458.093 kb on + strand, within CA264_01975 at 458.093 kb on + strand, within CA264_01975 at 458.094 kb on - strand, within CA264_01975 at 458.094 kb on - strand, within CA264_01975 at 458.099 kb on - strand, within CA264_01975 at 458.099 kb on - strand, within CA264_01975 at 458.099 kb on - strand, within CA264_01975 at 458.106 kb on + strand, within CA264_01975 at 458.106 kb on + strand, within CA264_01975 at 458.107 kb on - strand, within CA264_01975 at 458.126 kb on + strand, within CA264_01975 at 458.141 kb on + strand, within CA264_01975 at 458.142 kb on - strand, within CA264_01975 at 458.212 kb on - strand, within CA264_01975 at 458.251 kb on + strand, within CA264_01975 at 458.252 kb on - strand, within CA264_01975 at 458.281 kb on - strand at 458.335 kb on + strand at 458.359 kb on - strand at 458.426 kb on + strand at 458.426 kb on + strand at 458.475 kb on - strand at 458.506 kb on - strand at 458.516 kb on + strand at 458.516 kb on + strand at 458.630 kb on + strand, within CA264_01980 at 458.631 kb on - strand, within CA264_01980 at 458.631 kb on - strand, within CA264_01980 at 458.650 kb on + strand, within CA264_01980 at 458.651 kb on - strand, within CA264_01980 at 458.687 kb on + strand, within CA264_01980 at 458.727 kb on - strand, within CA264_01980 at 458.727 kb on - strand, within CA264_01980 at 458.772 kb on - strand, within CA264_01980 at 458.772 kb on - strand, within CA264_01980 at 458.774 kb on - strand, within CA264_01980 at 458.799 kb on + strand, within CA264_01980 at 458.838 kb on + strand, within CA264_01980 at 458.907 kb on + strand, within CA264_01980 at 458.990 kb on + strand, within CA264_01980 at 458.991 kb on - strand, within CA264_01980 at 459.083 kb on - strand, within CA264_01980 at 459.085 kb on - strand, within CA264_01980 at 459.159 kb on - strand at 459.160 kb on + strand at 459.185 kb on - strand at 459.277 kb on + strand at 459.420 kb on - strand, within CA264_01985 at 459.425 kb on - strand, within CA264_01985 at 459.635 kb on - strand, within CA264_01990 at 459.643 kb on - strand, within CA264_01990 at 459.683 kb on - strand at 459.842 kb on + strand, within CA264_01995 at 459.894 kb on + strand, within CA264_01995 at 459.895 kb on - strand, within CA264_01995 at 459.954 kb on + strand, within CA264_01995 at 459.993 kb on + strand, within CA264_01995 at 459.993 kb on + strand, within CA264_01995 at 459.996 kb on + strand, within CA264_01995 at 460.011 kb on + strand, within CA264_01995 at 460.012 kb on - strand, within CA264_01995 at 460.012 kb on - strand, within CA264_01995 at 460.075 kb on + strand, within CA264_01995 at 460.075 kb on + strand, within CA264_01995 at 460.089 kb on + strand, within CA264_01995 at 460.090 kb on - strand, within CA264_01995 at 460.131 kb on + strand, within CA264_01995 at 460.131 kb on + strand, within CA264_01995 at 460.131 kb on + strand, within CA264_01995 at 460.131 kb on + strand, within CA264_01995 at 460.132 kb on - strand, within CA264_01995 at 460.132 kb on - strand, within CA264_01995 at 460.132 kb on - strand, within CA264_01995
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 457,550 + CA264_01975 0.38 -1.3 457,595 + CA264_01975 0.41 -1.0 457,708 + CA264_01975 0.49 +0.0 457,709 - CA264_01975 0.49 -0.1 457,713 + CA264_01975 0.50 +1.1 457,714 - CA264_01975 0.50 +0.1 457,892 - CA264_01975 0.63 -0.8 457,914 + CA264_01975 0.65 +0.0 457,915 - CA264_01975 0.65 -1.0 458,035 + CA264_01975 0.73 -1.2 458,035 + CA264_01975 0.73 +0.3 458,036 - CA264_01975 0.73 +0.4 458,093 + CA264_01975 0.78 +0.7 458,093 + CA264_01975 0.78 -0.0 458,094 - CA264_01975 0.78 -0.2 458,094 - CA264_01975 0.78 -0.4 458,099 - CA264_01975 0.78 -0.1 458,099 - CA264_01975 0.78 -1.8 458,099 - CA264_01975 0.78 -0.1 458,106 + CA264_01975 0.79 +0.4 458,106 + CA264_01975 0.79 +0.3 458,107 - CA264_01975 0.79 +0.5 458,126 + CA264_01975 0.80 -0.0 458,141 + CA264_01975 0.81 -0.6 458,142 - CA264_01975 0.81 +0.5 458,212 - CA264_01975 0.86 -0.6 458,251 + CA264_01975 0.89 -0.6 458,252 - CA264_01975 0.89 -0.0 458,281 - +0.1 458,335 + +1.4 458,359 - -0.1 458,426 + -0.2 458,426 + -0.3 458,475 - -0.0 458,506 - -0.3 458,516 + +0.5 458,516 + -0.6 458,630 + CA264_01980 0.14 -0.4 458,631 - CA264_01980 0.14 -0.3 458,631 - CA264_01980 0.14 -0.2 458,650 + CA264_01980 0.17 -1.2 458,651 - CA264_01980 0.17 -1.5 458,687 + CA264_01980 0.23 -0.7 458,727 - CA264_01980 0.29 -1.4 458,727 - CA264_01980 0.29 -1.2 458,772 - CA264_01980 0.36 -0.5 458,772 - CA264_01980 0.36 -2.2 458,774 - CA264_01980 0.37 -0.5 458,799 + CA264_01980 0.41 +0.4 458,838 + CA264_01980 0.47 -1.2 458,907 + CA264_01980 0.58 -0.6 458,990 + CA264_01980 0.71 -1.1 458,991 - CA264_01980 0.71 -0.5 459,083 - CA264_01980 0.86 -0.3 459,085 - CA264_01980 0.86 -0.4 459,159 - -0.6 459,160 + +0.1 459,185 - -0.7 459,277 + -0.6 459,420 - CA264_01985 0.46 -1.3 459,425 - CA264_01985 0.53 -0.6 459,635 - CA264_01990 0.53 -0.3 459,643 - CA264_01990 0.63 -1.0 459,683 - +0.3 459,842 + CA264_01995 0.13 +0.2 459,894 + CA264_01995 0.20 -0.6 459,895 - CA264_01995 0.20 +0.8 459,954 + CA264_01995 0.28 -0.2 459,993 + CA264_01995 0.34 -0.3 459,993 + CA264_01995 0.34 -0.5 459,996 + CA264_01995 0.34 -0.6 460,011 + CA264_01995 0.36 -0.4 460,012 - CA264_01995 0.36 +0.3 460,012 - CA264_01995 0.36 -0.2 460,075 + CA264_01995 0.45 +1.1 460,075 + CA264_01995 0.45 -1.0 460,089 + CA264_01995 0.47 -0.4 460,090 - CA264_01995 0.47 -1.2 460,131 + CA264_01995 0.52 -1.6 460,131 + CA264_01995 0.52 -0.1 460,131 + CA264_01995 0.52 -0.2 460,131 + CA264_01995 0.52 -0.2 460,132 - CA264_01995 0.53 -0.2 460,132 - CA264_01995 0.53 -0.2 460,132 - CA264_01995 0.53 +0.4
Or see this region's nucleotide sequence