Strain Fitness in Pseudomonas simiae WCS417 around PS417_20000

Experiment: Spectinomycin 0.4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.4 mg/ml
4,342,600	-		PS417_19995	0.28	-0.5
4,342,704	+		PS417_19995	0.36	+0.4
4,342,921	-		PS417_19995	0.53	+0.1
4,343,051	+		PS417_19995	0.63	+0.2
4,343,052	-		PS417_19995	0.63	+0.0
4,343,052	-		PS417_19995	0.63	+1.2
4,343,137	+		PS417_19995	0.70	-1.5
4,343,223	+		PS417_19995	0.77	+0.6
4,343,345	+		PS417_19995	0.86	+0.2
4,343,374	+		PS417_19995	0.88	+0.5
4,343,374	+		PS417_19995	0.88	-0.3
4,343,375	-		PS417_19995	0.88	+0.3
4,343,410	-				+0.1
4,343,463	+				-0.1
4,343,472	-				-0.2
4,343,514	+				+0.9
4,343,514	+				+0.0
4,343,700	+		PS417_20000	0.20	+0.5
4,343,700	+		PS417_20000	0.20	+0.8
4,343,700	+		PS417_20000	0.20	-0.2
4,343,700	+		PS417_20000	0.20	+1.2
4,343,701	-		PS417_20000	0.20	+0.2
4,343,701	-		PS417_20000	0.20	-0.6
4,343,701	-		PS417_20000	0.20	-0.6
4,343,701	-		PS417_20000	0.20	-0.1
4,343,707	-		PS417_20000	0.21	-0.2
4,343,747	+		PS417_20000	0.28	+0.1
4,343,748	-		PS417_20000	0.28	+1.2
4,343,818	-		PS417_20000	0.41	-0.6
4,343,826	+				+1.2
4,343,827	-		PS417_20000	0.43	+0.1
4,343,827	-		PS417_20000	0.43	-0.4
4,343,827	-		PS417_20000	0.43	-0.6
4,343,916	+		PS417_20000	0.59	-0.7
4,343,926	-		PS417_20000	0.61	+0.9
4,344,145	+				+0.9
4,344,145	+				-0.1
4,344,145	+				-0.1
4,344,145	+				+0.1
4,344,145	+				+0.2
4,344,146	-				-0.6
4,344,146	-				-0.0
4,344,146	-				+0.2
4,344,146	-				-0.1
4,344,146	-				+1.2
4,344,146	-				-0.3
4,344,146	-				-0.2
4,344,146	-				+0.4
4,344,146	-				-0.3
4,344,357	-				+0.8
4,344,420	+				-0.2
4,344,421	-				-0.5
4,344,439	-		PS417_20010	0.11	-0.7
4,344,564	-		PS417_20010	0.21	-0.5
4,344,606	+		PS417_20010	0.25	-0.5
4,344,606	+		PS417_20010	0.25	-0.3
4,344,607	-		PS417_20010	0.25	+0.6
4,344,669	+		PS417_20010	0.30	+0.2
4,344,669	+		PS417_20010	0.30	+0.5
4,344,669	+		PS417_20010	0.30	+2.2
4,344,670	-		PS417_20010	0.30	-0.3
4,344,726	+		PS417_20010	0.35	+0.0
4,344,727	-		PS417_20010	0.35	-1.2
4,344,727	-		PS417_20010	0.35	-0.0