Strain Fitness in Pseudomonas simiae WCS417 around PS417_18720

Experiment: Spectinomycin 0.4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.4 mg/ml
4,062,607	-		PS417_18715	0.20	-0.0
4,062,607	-		PS417_18715	0.20	-0.2
4,062,607	-		PS417_18715	0.20	+0.1
4,062,637	+		PS417_18715	0.23	-0.8
4,062,638	-		PS417_18715	0.23	-0.1
4,062,660	+		PS417_18715	0.25	-0.1
4,062,835	-		PS417_18715	0.41	+1.9
4,062,835	-		PS417_18715	0.41	+0.2
4,062,900	+		PS417_18715	0.47	+0.7
4,062,900	+		PS417_18715	0.47	+1.0
4,062,900	+		PS417_18715	0.47	+0.7
4,062,900	+		PS417_18715	0.47	-0.1
4,062,900	+		PS417_18715	0.47	-0.4
4,063,041	+				+2.1
4,063,042	-		PS417_18715	0.61	-0.9
4,063,149	+		PS417_18715	0.71	-0.0
4,063,149	+		PS417_18715	0.71	+1.0
4,063,150	-		PS417_18715	0.71	-2.0
4,063,150	-		PS417_18715	0.71	+0.2
4,063,239	+		PS417_18715	0.79	+0.0
4,063,240	-		PS417_18715	0.79	-0.4
4,063,405	+				-0.2
4,063,405	+				+1.1
4,063,405	+				+1.1
4,063,407	+				+0.8
4,063,408	-				+0.4
4,063,408	-				+0.5
4,063,408	-				-0.1
4,063,481	+				-0.1
4,063,551	+				+0.0
4,063,551	+				-0.4
4,063,552	-				-1.0
4,063,552	-				+0.6
4,063,825	+		PS417_18720	0.26	+1.2
4,063,874	-		PS417_18720	0.31	-0.1
4,063,874	-		PS417_18720	0.31	+0.1
4,063,985	-		PS417_18720	0.43	+0.1
4,064,143	+		PS417_18720	0.60	-0.2
4,064,144	-		PS417_18720	0.60	+0.6
4,064,144	-		PS417_18720	0.60	-0.4
4,064,144	-		PS417_18720	0.60	-0.1
4,064,305	+		PS417_18720	0.77	-0.3
4,064,306	-		PS417_18720	0.77	+0.0
4,064,306	-		PS417_18720	0.77	+0.0
4,064,369	-		PS417_18720	0.84	+0.9
4,064,486	+				+0.5
4,064,533	-				-0.3
4,064,555	+				+0.8
4,064,555	+				-0.5
4,064,556	-				+0.7
4,064,586	-				+0.0
4,064,642	+				+0.1
4,064,642	+				+0.9
4,064,642	+				-0.4
4,064,643	-				-0.4
4,064,643	-				-0.1
4,064,744	-				+0.2
4,064,744	-				-0.4
4,064,809	+				-0.9
4,064,827	-				-0.4
4,064,827	-				-0.0
4,064,827	-				-0.4
4,065,074	-		PS417_18725	0.22	+1.9
4,065,074	-		PS417_18725	0.22	+0.4
4,065,084	+		PS417_18725	0.23	+0.9
4,065,085	-				-0.2
4,065,085	-		PS417_18725	0.23	-0.3
4,065,085	-		PS417_18725	0.23	+0.1
4,065,253	-		PS417_18725	0.40	+0.7
4,065,341	+		PS417_18725	0.49	-0.3
4,065,342	-		PS417_18725	0.49	-0.2
4,065,376	+		PS417_18725	0.52	-0.1
4,065,415	+		PS417_18725	0.56	+0.1
4,065,415	+		PS417_18725	0.56	-0.2
4,065,514	-		PS417_18725	0.66	+0.6
4,065,514	-		PS417_18725	0.66	+0.3