Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4144 and Echvi_4145 are separated by 216 nucleotides Echvi_4145 and Echvi_4146 are separated by 76 nucleotides Echvi_4146 and Echvi_4147 are separated by 225 nucleotides Echvi_4147 and Echvi_4148 overlap by 1 nucleotides
Echvi_4144: Echvi_4144 - hypothetical protein, at 4,961,124 to 4,961,393
_4144
Echvi_4145: Echvi_4145 - Uncharacterized protein conserved in bacteria, at 4,961,610 to 4,961,975
_4145
Echvi_4146: Echvi_4146 - Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes, at 4,962,052 to 4,963,395
_4146
Echvi_4147: Echvi_4147 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 4,963,621 to 4,964,256
_4147
Echvi_4148: Echvi_4148 - Copper chaperone, at 4,964,256 to 4,965,158
_4148
Position (kb)
4962
4963
4964 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5
6 at 4961.106 kb on - strand at 4961.126 kb on - strand at 4961.166 kb on + strand, within Echvi_4144 at 4961.237 kb on - strand, within Echvi_4144 at 4961.237 kb on - strand, within Echvi_4144 at 4961.237 kb on - strand, within Echvi_4144 at 4961.320 kb on - strand, within Echvi_4144 at 4961.328 kb on + strand, within Echvi_4144 at 4961.329 kb on - strand, within Echvi_4144 at 4961.334 kb on - strand, within Echvi_4144 at 4961.373 kb on + strand at 4961.374 kb on - strand at 4961.462 kb on + strand at 4961.462 kb on + strand at 4961.462 kb on + strand at 4961.467 kb on + strand at 4961.493 kb on - strand at 4961.493 kb on - strand at 4961.569 kb on + strand at 4961.646 kb on + strand at 4961.646 kb on + strand at 4961.646 kb on + strand at 4961.647 kb on - strand, within Echvi_4145 at 4961.655 kb on + strand, within Echvi_4145 at 4961.676 kb on - strand, within Echvi_4145 at 4961.714 kb on + strand, within Echvi_4145 at 4961.777 kb on + strand, within Echvi_4145 at 4961.814 kb on + strand, within Echvi_4145 at 4961.819 kb on - strand, within Echvi_4145 at 4961.934 kb on + strand, within Echvi_4145 at 4961.946 kb on + strand at 4961.947 kb on - strand at 4962.061 kb on - strand at 4962.061 kb on - strand at 4962.089 kb on + strand at 4962.095 kb on + strand at 4962.095 kb on + strand at 4962.096 kb on - strand at 4962.096 kb on - strand at 4962.110 kb on - strand at 4962.110 kb on - strand at 4962.110 kb on - strand at 4962.118 kb on + strand at 4962.186 kb on + strand at 4962.187 kb on - strand, within Echvi_4146 at 4962.213 kb on + strand, within Echvi_4146 at 4962.230 kb on + strand, within Echvi_4146 at 4962.230 kb on + strand, within Echvi_4146 at 4962.230 kb on + strand, within Echvi_4146 at 4962.236 kb on + strand, within Echvi_4146 at 4962.236 kb on + strand, within Echvi_4146 at 4962.237 kb on - strand, within Echvi_4146 at 4962.237 kb on - strand, within Echvi_4146 at 4962.237 kb on - strand, within Echvi_4146 at 4962.237 kb on - strand, within Echvi_4146 at 4962.249 kb on + strand, within Echvi_4146 at 4962.266 kb on + strand, within Echvi_4146 at 4962.267 kb on - strand, within Echvi_4146 at 4962.304 kb on + strand, within Echvi_4146 at 4962.304 kb on + strand, within Echvi_4146 at 4962.310 kb on + strand, within Echvi_4146 at 4962.310 kb on + strand, within Echvi_4146 at 4962.310 kb on + strand, within Echvi_4146 at 4962.311 kb on - strand, within Echvi_4146 at 4962.311 kb on - strand, within Echvi_4146 at 4962.311 kb on - strand, within Echvi_4146 at 4962.311 kb on - strand, within Echvi_4146 at 4962.336 kb on + strand, within Echvi_4146 at 4962.336 kb on + strand, within Echvi_4146 at 4962.341 kb on - strand, within Echvi_4146 at 4962.341 kb on - strand, within Echvi_4146 at 4962.341 kb on - strand, within Echvi_4146 at 4962.341 kb on - strand, within Echvi_4146 at 4962.341 kb on - strand, within Echvi_4146 at 4962.350 kb on - strand, within Echvi_4146 at 4962.359 kb on - strand, within Echvi_4146 at 4962.387 kb on + strand, within Echvi_4146 at 4962.389 kb on + strand, within Echvi_4146 at 4962.417 kb on + strand, within Echvi_4146 at 4962.477 kb on + strand, within Echvi_4146 at 4962.477 kb on + strand, within Echvi_4146 at 4962.477 kb on + strand, within Echvi_4146 at 4962.477 kb on + strand, within Echvi_4146 at 4962.480 kb on + strand, within Echvi_4146 at 4962.481 kb on - strand, within Echvi_4146 at 4962.481 kb on - strand, within Echvi_4146 at 4962.483 kb on + strand, within Echvi_4146 at 4962.484 kb on - strand, within Echvi_4146 at 4962.503 kb on + strand, within Echvi_4146 at 4962.503 kb on + strand, within Echvi_4146 at 4962.503 kb on + strand, within Echvi_4146 at 4962.504 kb on - strand, within Echvi_4146 at 4962.504 kb on - strand, within Echvi_4146 at 4962.504 kb on - strand, within Echvi_4146 at 4962.504 kb on - strand, within Echvi_4146 at 4962.505 kb on + strand, within Echvi_4146 at 4962.505 kb on + strand, within Echvi_4146 at 4962.506 kb on - strand, within Echvi_4146 at 4962.506 kb on - strand, within Echvi_4146 at 4962.506 kb on - strand, within Echvi_4146 at 4962.510 kb on + strand, within Echvi_4146 at 4962.510 kb on + strand, within Echvi_4146 at 4962.510 kb on + strand, within Echvi_4146 at 4962.517 kb on - strand, within Echvi_4146 at 4962.533 kb on + strand, within Echvi_4146 at 4962.533 kb on + strand, within Echvi_4146 at 4962.533 kb on + strand, within Echvi_4146 at 4962.534 kb on - strand, within Echvi_4146 at 4962.629 kb on - strand, within Echvi_4146 at 4962.679 kb on + strand, within Echvi_4146 at 4962.680 kb on - strand, within Echvi_4146 at 4962.682 kb on - strand, within Echvi_4146 at 4962.730 kb on + strand, within Echvi_4146 at 4962.730 kb on + strand, within Echvi_4146 at 4962.730 kb on + strand, within Echvi_4146 at 4962.731 kb on - strand, within Echvi_4146 at 4962.738 kb on + strand, within Echvi_4146 at 4962.773 kb on - strand, within Echvi_4146 at 4962.773 kb on - strand, within Echvi_4146 at 4962.777 kb on + strand, within Echvi_4146 at 4962.778 kb on - strand, within Echvi_4146 at 4962.822 kb on + strand, within Echvi_4146 at 4962.825 kb on + strand, within Echvi_4146 at 4962.873 kb on + strand, within Echvi_4146 at 4962.874 kb on - strand, within Echvi_4146 at 4962.874 kb on - strand, within Echvi_4146 at 4962.875 kb on + strand, within Echvi_4146 at 4962.875 kb on + strand, within Echvi_4146 at 4962.876 kb on - strand, within Echvi_4146 at 4962.897 kb on + strand, within Echvi_4146 at 4962.897 kb on + strand, within Echvi_4146 at 4962.897 kb on + strand, within Echvi_4146 at 4963.153 kb on + strand, within Echvi_4146 at 4963.154 kb on - strand, within Echvi_4146 at 4963.154 kb on - strand, within Echvi_4146 at 4963.154 kb on - strand, within Echvi_4146 at 4963.167 kb on + strand, within Echvi_4146 at 4963.216 kb on - strand, within Echvi_4146 at 4963.286 kb on + strand at 4963.459 kb on + strand at 4963.459 kb on + strand at 4963.459 kb on + strand at 4963.459 kb on + strand at 4963.459 kb on + strand at 4963.492 kb on - strand at 4963.492 kb on - strand at 4963.492 kb on - strand at 4963.517 kb on - strand at 4963.517 kb on - strand at 4963.517 kb on - strand at 4963.517 kb on - strand at 4963.517 kb on - strand at 4963.539 kb on - strand at 4963.539 kb on - strand at 4963.580 kb on + strand at 4963.580 kb on + strand at 4963.580 kb on + strand at 4963.580 kb on + strand at 4963.581 kb on - strand at 4963.581 kb on - strand at 4963.581 kb on - strand at 4963.581 kb on - strand at 4963.581 kb on - strand at 4963.581 kb on - strand at 4963.583 kb on + strand at 4963.584 kb on - strand at 4963.584 kb on - strand at 4963.622 kb on + strand at 4963.626 kb on + strand at 4963.714 kb on + strand, within Echvi_4147 at 4963.749 kb on + strand, within Echvi_4147 at 4963.749 kb on + strand, within Echvi_4147 at 4963.777 kb on - strand, within Echvi_4147 at 4963.843 kb on + strand, within Echvi_4147 at 4963.845 kb on + strand, within Echvi_4147 at 4963.865 kb on - strand, within Echvi_4147 at 4963.931 kb on + strand, within Echvi_4147 at 4963.932 kb on - strand, within Echvi_4147 at 4963.932 kb on - strand, within Echvi_4147 at 4963.996 kb on - strand, within Echvi_4147 at 4964.019 kb on + strand, within Echvi_4147 at 4964.089 kb on + strand, within Echvi_4147 at 4964.122 kb on - strand, within Echvi_4147 at 4964.130 kb on + strand, within Echvi_4147 at 4964.130 kb on + strand, within Echvi_4147 at 4964.130 kb on + strand, within Echvi_4147 at 4964.131 kb on - strand, within Echvi_4147 at 4964.135 kb on - strand, within Echvi_4147 at 4964.139 kb on + strand, within Echvi_4147 at 4964.139 kb on + strand, within Echvi_4147 at 4964.139 kb on + strand, within Echvi_4147 at 4964.140 kb on - strand, within Echvi_4147 at 4964.140 kb on - strand, within Echvi_4147 at 4964.150 kb on - strand, within Echvi_4147 at 4964.183 kb on + strand, within Echvi_4147 at 4964.192 kb on - strand, within Echvi_4147 at 4964.258 kb on - strand at 4964.277 kb on + strand at 4964.278 kb on - strand at 4964.344 kb on + strand at 4964.344 kb on + strand at 4964.344 kb on + strand at 4964.344 kb on + strand at 4964.345 kb on - strand at 4964.345 kb on - strand at 4964.349 kb on + strand, within Echvi_4148 at 4964.352 kb on + strand, within Echvi_4148 at 4964.353 kb on - strand, within Echvi_4148 at 4964.353 kb on - strand, within Echvi_4148 at 4964.357 kb on + strand, within Echvi_4148 at 4964.357 kb on + strand, within Echvi_4148 at 4964.358 kb on - strand, within Echvi_4148 at 4964.358 kb on - strand, within Echvi_4148 at 4964.358 kb on - strand, within Echvi_4148 at 4964.358 kb on - strand, within Echvi_4148 at 4964.360 kb on + strand, within Echvi_4148 at 4964.372 kb on - strand, within Echvi_4148
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 4,961,106 - -2.1 4,961,126 - -0.1 4,961,166 + Echvi_4144 0.16 +1.9 4,961,237 - Echvi_4144 0.42 +0.1 4,961,237 - Echvi_4144 0.42 -1.6 4,961,237 - Echvi_4144 0.42 +1.2 4,961,320 - Echvi_4144 0.73 -3.1 4,961,328 + Echvi_4144 0.76 -0.9 4,961,329 - Echvi_4144 0.76 -2.4 4,961,334 - Echvi_4144 0.78 -2.0 4,961,373 + +1.7 4,961,374 - -3.4 4,961,462 + +1.3 4,961,462 + +1.0 4,961,462 + -0.0 4,961,467 + +1.5 4,961,493 - +1.2 4,961,493 - -1.8 4,961,569 + +0.5 4,961,646 + -0.8 4,961,646 + -3.8 4,961,646 + +3.3 4,961,647 - Echvi_4145 0.10 +2.0 4,961,655 + Echvi_4145 0.12 +0.2 4,961,676 - Echvi_4145 0.18 +2.2 4,961,714 + Echvi_4145 0.28 +3.6 4,961,777 + Echvi_4145 0.46 -0.1 4,961,814 + Echvi_4145 0.56 -1.2 4,961,819 - Echvi_4145 0.57 -1.5 4,961,934 + Echvi_4145 0.89 +0.0 4,961,946 + -0.5 4,961,947 - -2.8 4,962,061 - +1.9 4,962,061 - +1.3 4,962,089 + +0.7 4,962,095 + +0.7 4,962,095 + +0.8 4,962,096 - -0.5 4,962,096 - +1.3 4,962,110 - -1.8 4,962,110 - +1.9 4,962,110 - +1.5 4,962,118 + +3.3 4,962,186 + -3.0 4,962,187 - Echvi_4146 0.10 +0.4 4,962,213 + Echvi_4146 0.12 -1.5 4,962,230 + Echvi_4146 0.13 +1.5 4,962,230 + Echvi_4146 0.13 -2.0 4,962,230 + Echvi_4146 0.13 -1.4 4,962,236 + Echvi_4146 0.14 -1.1 4,962,236 + Echvi_4146 0.14 +2.2 4,962,237 - Echvi_4146 0.14 +1.3 4,962,237 - Echvi_4146 0.14 -1.6 4,962,237 - Echvi_4146 0.14 -1.1 4,962,237 - Echvi_4146 0.14 -1.2 4,962,249 + Echvi_4146 0.15 +1.7 4,962,266 + Echvi_4146 0.16 +1.0 4,962,267 - Echvi_4146 0.16 +0.5 4,962,304 + Echvi_4146 0.19 -1.2 4,962,304 + Echvi_4146 0.19 +4.7 4,962,310 + Echvi_4146 0.19 +6.2 4,962,310 + Echvi_4146 0.19 -1.1 4,962,310 + Echvi_4146 0.19 -0.5 4,962,311 - Echvi_4146 0.19 +3.1 4,962,311 - Echvi_4146 0.19 -3.3 4,962,311 - Echvi_4146 0.19 +0.5 4,962,311 - Echvi_4146 0.19 +0.5 4,962,336 + Echvi_4146 0.21 +2.9 4,962,336 + Echvi_4146 0.21 -0.6 4,962,341 - Echvi_4146 0.22 -0.4 4,962,341 - Echvi_4146 0.22 +0.6 4,962,341 - Echvi_4146 0.22 -1.5 4,962,341 - Echvi_4146 0.22 +1.7 4,962,341 - Echvi_4146 0.22 -0.5 4,962,350 - Echvi_4146 0.22 +0.5 4,962,359 - Echvi_4146 0.23 -1.6 4,962,387 + Echvi_4146 0.25 -3.2 4,962,389 + Echvi_4146 0.25 +0.7 4,962,417 + Echvi_4146 0.27 -3.2 4,962,477 + Echvi_4146 0.32 +0.5 4,962,477 + Echvi_4146 0.32 -2.8 4,962,477 + Echvi_4146 0.32 +2.9 4,962,477 + Echvi_4146 0.32 -0.9 4,962,480 + Echvi_4146 0.32 +3.5 4,962,481 - Echvi_4146 0.32 -0.8 4,962,481 - Echvi_4146 0.32 -0.6 4,962,483 + Echvi_4146 0.32 +1.2 4,962,484 - Echvi_4146 0.32 -2.8 4,962,503 + Echvi_4146 0.34 +1.6 4,962,503 + Echvi_4146 0.34 -1.2 4,962,503 + Echvi_4146 0.34 -2.3 4,962,504 - Echvi_4146 0.34 +0.9 4,962,504 - Echvi_4146 0.34 -1.1 4,962,504 - Echvi_4146 0.34 -2.2 4,962,504 - Echvi_4146 0.34 +1.9 4,962,505 + Echvi_4146 0.34 -2.5 4,962,505 + Echvi_4146 0.34 +0.5 4,962,506 - Echvi_4146 0.34 -0.3 4,962,506 - Echvi_4146 0.34 -2.4 4,962,506 - Echvi_4146 0.34 -0.4 4,962,510 + Echvi_4146 0.34 -2.1 4,962,510 + Echvi_4146 0.34 -1.9 4,962,510 + Echvi_4146 0.34 -1.5 4,962,517 - Echvi_4146 0.35 -2.3 4,962,533 + Echvi_4146 0.36 -0.8 4,962,533 + Echvi_4146 0.36 +0.3 4,962,533 + Echvi_4146 0.36 -0.9 4,962,534 - Echvi_4146 0.36 +1.3 4,962,629 - Echvi_4146 0.43 +2.6 4,962,679 + Echvi_4146 0.47 -0.8 4,962,680 - Echvi_4146 0.47 +0.2 4,962,682 - Echvi_4146 0.47 -2.1 4,962,730 + Echvi_4146 0.50 -1.6 4,962,730 + Echvi_4146 0.50 +0.9 4,962,730 + Echvi_4146 0.50 -1.7 4,962,731 - Echvi_4146 0.51 +1.5 4,962,738 + Echvi_4146 0.51 -3.0 4,962,773 - Echvi_4146 0.54 -0.8 4,962,773 - Echvi_4146 0.54 +0.3 4,962,777 + Echvi_4146 0.54 +0.6 4,962,778 - Echvi_4146 0.54 +1.4 4,962,822 + Echvi_4146 0.57 -2.8 4,962,825 + Echvi_4146 0.58 -2.6 4,962,873 + Echvi_4146 0.61 +1.3 4,962,874 - Echvi_4146 0.61 -0.9 4,962,874 - Echvi_4146 0.61 -0.1 4,962,875 + Echvi_4146 0.61 -0.5 4,962,875 + Echvi_4146 0.61 +0.8 4,962,876 - Echvi_4146 0.61 -2.6 4,962,897 + Echvi_4146 0.63 +0.4 4,962,897 + Echvi_4146 0.63 -0.1 4,962,897 + Echvi_4146 0.63 +1.7 4,963,153 + Echvi_4146 0.82 -1.6 4,963,154 - Echvi_4146 0.82 -1.5 4,963,154 - Echvi_4146 0.82 -0.5 4,963,154 - Echvi_4146 0.82 +1.5 4,963,167 + Echvi_4146 0.83 +1.9 4,963,216 - Echvi_4146 0.87 +1.3 4,963,286 + +1.2 4,963,459 + -2.6 4,963,459 + +4.0 4,963,459 + +2.1 4,963,459 + +0.5 4,963,459 + +1.9 4,963,492 - +2.2 4,963,492 - -0.5 4,963,492 - -2.3 4,963,517 - +0.5 4,963,517 - +3.0 4,963,517 - -2.7 4,963,517 - +3.1 4,963,517 - -0.8 4,963,539 - -1.6 4,963,539 - -0.1 4,963,580 + -2.1 4,963,580 + +1.5 4,963,580 + -1.7 4,963,580 + -0.8 4,963,581 - -0.6 4,963,581 - +0.6 4,963,581 - -1.9 4,963,581 - +0.6 4,963,581 - +0.9 4,963,581 - -0.6 4,963,583 + +0.7 4,963,584 - +0.2 4,963,584 - +0.6 4,963,622 + -2.5 4,963,626 + +0.7 4,963,714 + Echvi_4147 0.15 +0.9 4,963,749 + Echvi_4147 0.20 +1.0 4,963,749 + Echvi_4147 0.20 +0.9 4,963,777 - Echvi_4147 0.25 -2.4 4,963,843 + Echvi_4147 0.35 -0.1 4,963,845 + Echvi_4147 0.35 -2.5 4,963,865 - Echvi_4147 0.38 -2.1 4,963,931 + Echvi_4147 0.49 +1.4 4,963,932 - Echvi_4147 0.49 -1.1 4,963,932 - Echvi_4147 0.49 +2.0 4,963,996 - Echvi_4147 0.59 -0.8 4,964,019 + Echvi_4147 0.63 -2.6 4,964,089 + Echvi_4147 0.74 +0.4 4,964,122 - Echvi_4147 0.79 +2.6 4,964,130 + Echvi_4147 0.80 +0.8 4,964,130 + Echvi_4147 0.80 -1.4 4,964,130 + Echvi_4147 0.80 -1.9 4,964,131 - Echvi_4147 0.80 -1.6 4,964,135 - Echvi_4147 0.81 -0.5 4,964,139 + Echvi_4147 0.81 -1.6 4,964,139 + Echvi_4147 0.81 +1.8 4,964,139 + Echvi_4147 0.81 -2.9 4,964,140 - Echvi_4147 0.82 -3.1 4,964,140 - Echvi_4147 0.82 +2.2 4,964,150 - Echvi_4147 0.83 -0.8 4,964,183 + Echvi_4147 0.88 -0.3 4,964,192 - Echvi_4147 0.90 -1.3 4,964,258 - +0.7 4,964,277 + -3.2 4,964,278 - -2.6 4,964,344 + -3.3 4,964,344 + +0.1 4,964,344 + +2.9 4,964,344 + +1.9 4,964,345 - -1.6 4,964,345 - -0.1 4,964,349 + Echvi_4148 0.10 +0.6 4,964,352 + Echvi_4148 0.11 -2.6 4,964,353 - Echvi_4148 0.11 +0.0 4,964,353 - Echvi_4148 0.11 +0.6 4,964,357 + Echvi_4148 0.11 +1.0 4,964,357 + Echvi_4148 0.11 +3.3 4,964,358 - Echvi_4148 0.11 -3.5 4,964,358 - Echvi_4148 0.11 -0.9 4,964,358 - Echvi_4148 0.11 -0.9 4,964,358 - Echvi_4148 0.11 -0.8 4,964,360 + Echvi_4148 0.12 -0.5 4,964,372 - Echvi_4148 0.13 -0.9
Or see this region's nucleotide sequence