Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4024 and Echvi_4025 are separated by 14 nucleotides Echvi_4025 and Echvi_4026 are separated by 60 nucleotides Echvi_4026 and Echvi_4027 are separated by 78 nucleotides
Echvi_4024: Echvi_4024 - hypothetical protein, at 4,818,517 to 4,819,608
_4024
Echvi_4025: Echvi_4025 - hypothetical protein, at 4,819,623 to 4,819,991
_4025
Echvi_4026: Echvi_4026 - hypothetical protein, at 4,820,052 to 4,820,852
_4026
Echvi_4027: Echvi_4027 - hypothetical protein, at 4,820,931 to 4,822,271
_4027
Position (kb)
4819
4820 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 4818.635 kb on - strand, within Echvi_4024 at 4818.635 kb on - strand, within Echvi_4024 at 4818.688 kb on + strand, within Echvi_4024 at 4818.850 kb on + strand, within Echvi_4024 at 4818.851 kb on - strand, within Echvi_4024 at 4818.884 kb on - strand, within Echvi_4024 at 4819.076 kb on - strand, within Echvi_4024 at 4819.237 kb on + strand, within Echvi_4024 at 4819.253 kb on + strand, within Echvi_4024 at 4819.317 kb on + strand, within Echvi_4024 at 4819.317 kb on + strand, within Echvi_4024 at 4819.318 kb on - strand, within Echvi_4024 at 4819.321 kb on - strand, within Echvi_4024 at 4819.349 kb on + strand, within Echvi_4024 at 4819.604 kb on + strand at 4819.630 kb on + strand at 4819.654 kb on + strand at 4819.654 kb on + strand at 4819.763 kb on - strand, within Echvi_4025 at 4819.790 kb on + strand, within Echvi_4025 at 4819.858 kb on + strand, within Echvi_4025 at 4819.863 kb on + strand, within Echvi_4025 at 4819.898 kb on + strand, within Echvi_4025 at 4819.937 kb on + strand, within Echvi_4025 at 4820.023 kb on - strand at 4820.023 kb on - strand at 4820.023 kb on - strand at 4820.042 kb on - strand at 4820.065 kb on + strand at 4820.077 kb on + strand at 4820.080 kb on + strand at 4820.115 kb on - strand at 4820.171 kb on + strand, within Echvi_4026 at 4820.173 kb on + strand, within Echvi_4026 at 4820.173 kb on + strand, within Echvi_4026 at 4820.173 kb on + strand, within Echvi_4026 at 4820.257 kb on + strand, within Echvi_4026 at 4820.257 kb on + strand, within Echvi_4026 at 4820.257 kb on + strand, within Echvi_4026 at 4820.258 kb on - strand, within Echvi_4026 at 4820.258 kb on - strand, within Echvi_4026 at 4820.258 kb on - strand, within Echvi_4026 at 4820.304 kb on - strand, within Echvi_4026 at 4820.304 kb on - strand, within Echvi_4026 at 4820.304 kb on - strand, within Echvi_4026 at 4820.307 kb on + strand, within Echvi_4026 at 4820.308 kb on - strand, within Echvi_4026 at 4820.325 kb on + strand, within Echvi_4026 at 4820.326 kb on - strand, within Echvi_4026 at 4820.430 kb on + strand, within Echvi_4026 at 4820.430 kb on + strand, within Echvi_4026 at 4820.431 kb on - strand, within Echvi_4026 at 4820.431 kb on - strand, within Echvi_4026 at 4820.432 kb on + strand, within Echvi_4026 at 4820.432 kb on + strand, within Echvi_4026 at 4820.432 kb on + strand, within Echvi_4026 at 4820.432 kb on + strand, within Echvi_4026 at 4820.458 kb on + strand, within Echvi_4026 at 4820.469 kb on + strand, within Echvi_4026 at 4820.470 kb on - strand, within Echvi_4026 at 4820.471 kb on + strand, within Echvi_4026 at 4820.472 kb on - strand, within Echvi_4026 at 4820.504 kb on - strand, within Echvi_4026 at 4820.526 kb on + strand, within Echvi_4026 at 4820.553 kb on + strand, within Echvi_4026 at 4820.647 kb on + strand, within Echvi_4026 at 4820.729 kb on - strand, within Echvi_4026 at 4820.775 kb on + strand at 4820.775 kb on + strand at 4820.776 kb on - strand at 4820.826 kb on + strand at 4820.827 kb on - strand at 4820.827 kb on - strand at 4820.851 kb on - strand at 4820.873 kb on - strand at 4820.986 kb on + strand at 4820.986 kb on + strand at 4820.987 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 4,818,635 - Echvi_4024 0.11 +2.5 4,818,635 - Echvi_4024 0.11 +0.6 4,818,688 + Echvi_4024 0.16 -2.3 4,818,850 + Echvi_4024 0.30 -0.9 4,818,851 - Echvi_4024 0.31 +2.9 4,818,884 - Echvi_4024 0.34 +0.6 4,819,076 - Echvi_4024 0.51 -1.6 4,819,237 + Echvi_4024 0.66 -1.6 4,819,253 + Echvi_4024 0.67 -0.5 4,819,317 + Echvi_4024 0.73 +2.2 4,819,317 + Echvi_4024 0.73 -0.9 4,819,318 - Echvi_4024 0.73 +0.0 4,819,321 - Echvi_4024 0.74 -3.2 4,819,349 + Echvi_4024 0.76 -1.2 4,819,604 + -1.9 4,819,630 + -2.3 4,819,654 + -2.9 4,819,654 + +0.8 4,819,763 - Echvi_4025 0.38 -2.2 4,819,790 + Echvi_4025 0.45 -2.1 4,819,858 + Echvi_4025 0.64 +0.3 4,819,863 + Echvi_4025 0.65 -0.4 4,819,898 + Echvi_4025 0.75 +0.6 4,819,937 + Echvi_4025 0.85 -1.4 4,820,023 - -1.0 4,820,023 - -2.4 4,820,023 - -1.9 4,820,042 - -1.0 4,820,065 + +1.9 4,820,077 + -2.0 4,820,080 + -2.5 4,820,115 - -2.9 4,820,171 + Echvi_4026 0.15 -3.1 4,820,173 + Echvi_4026 0.15 +2.4 4,820,173 + Echvi_4026 0.15 +0.4 4,820,173 + Echvi_4026 0.15 +3.6 4,820,257 + Echvi_4026 0.26 +1.3 4,820,257 + Echvi_4026 0.26 +1.5 4,820,257 + Echvi_4026 0.26 -0.4 4,820,258 - Echvi_4026 0.26 +2.5 4,820,258 - Echvi_4026 0.26 -1.0 4,820,258 - Echvi_4026 0.26 -3.6 4,820,304 - Echvi_4026 0.31 +0.6 4,820,304 - Echvi_4026 0.31 +0.6 4,820,304 - Echvi_4026 0.31 +1.3 4,820,307 + Echvi_4026 0.32 -2.9 4,820,308 - Echvi_4026 0.32 +1.3 4,820,325 + Echvi_4026 0.34 +2.9 4,820,326 - Echvi_4026 0.34 +1.2 4,820,430 + Echvi_4026 0.47 +0.3 4,820,430 + Echvi_4026 0.47 +0.8 4,820,431 - Echvi_4026 0.47 +1.1 4,820,431 - Echvi_4026 0.47 -1.9 4,820,432 + Echvi_4026 0.47 -3.9 4,820,432 + Echvi_4026 0.47 +1.4 4,820,432 + Echvi_4026 0.47 -1.5 4,820,432 + Echvi_4026 0.47 +1.5 4,820,458 + Echvi_4026 0.51 +0.7 4,820,469 + Echvi_4026 0.52 -1.1 4,820,470 - Echvi_4026 0.52 -1.7 4,820,471 + Echvi_4026 0.52 +0.9 4,820,472 - Echvi_4026 0.52 -2.1 4,820,504 - Echvi_4026 0.56 -0.5 4,820,526 + Echvi_4026 0.59 +1.0 4,820,553 + Echvi_4026 0.63 -2.6 4,820,647 + Echvi_4026 0.74 -1.8 4,820,729 - Echvi_4026 0.85 -1.8 4,820,775 + -2.2 4,820,775 + +1.1 4,820,776 - -0.6 4,820,826 + -1.4 4,820,827 - +1.1 4,820,827 - -0.9 4,820,851 - +0.1 4,820,873 - +2.2 4,820,986 + -3.1 4,820,986 + +1.8 4,820,987 - +0.3
Or see this region's nucleotide sequence