Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2274 and Echvi_2275 are separated by 25 nucleotides Echvi_2275 and Echvi_2276 are separated by 83 nucleotides Echvi_2276 and Echvi_2277 are separated by 21 nucleotides
Echvi_2274: Echvi_2274 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 2,692,736 to 2,693,872
_2274
Echvi_2275: Echvi_2275 - translesion DNA polymerase (imuC-like) (from data) , at 2,693,898 to 2,696,906
_2275
Echvi_2276: Echvi_2276 - Cysteine-rich domain., at 2,696,990 to 2,697,505
_2276
Echvi_2277: Echvi_2277 - Choline-glycine betaine transporter, at 2,697,527 to 2,699,065
_2277
Position (kb)
2693
2694
2695
2696
2697 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 2692.970 kb on + strand, within Echvi_2274 at 2692.970 kb on + strand, within Echvi_2274 at 2693.014 kb on + strand, within Echvi_2274 at 2693.032 kb on + strand, within Echvi_2274 at 2693.036 kb on - strand, within Echvi_2274 at 2693.060 kb on + strand, within Echvi_2274 at 2693.060 kb on + strand, within Echvi_2274 at 2693.061 kb on - strand, within Echvi_2274 at 2693.061 kb on - strand, within Echvi_2274 at 2693.069 kb on + strand, within Echvi_2274 at 2693.069 kb on + strand, within Echvi_2274 at 2693.069 kb on + strand, within Echvi_2274 at 2693.070 kb on - strand, within Echvi_2274 at 2693.070 kb on - strand, within Echvi_2274 at 2693.070 kb on - strand, within Echvi_2274 at 2693.070 kb on - strand, within Echvi_2274 at 2693.071 kb on + strand, within Echvi_2274 at 2693.071 kb on + strand, within Echvi_2274 at 2693.072 kb on - strand, within Echvi_2274 at 2693.072 kb on - strand, within Echvi_2274 at 2693.072 kb on - strand, within Echvi_2274 at 2693.072 kb on - strand, within Echvi_2274 at 2693.146 kb on + strand, within Echvi_2274 at 2693.209 kb on + strand, within Echvi_2274 at 2693.209 kb on + strand, within Echvi_2274 at 2693.214 kb on + strand, within Echvi_2274 at 2693.214 kb on + strand, within Echvi_2274 at 2693.226 kb on - strand, within Echvi_2274 at 2693.287 kb on + strand, within Echvi_2274 at 2693.288 kb on - strand, within Echvi_2274 at 2693.369 kb on + strand, within Echvi_2274 at 2693.381 kb on - strand, within Echvi_2274 at 2693.381 kb on - strand, within Echvi_2274 at 2693.415 kb on - strand, within Echvi_2274 at 2693.539 kb on + strand, within Echvi_2274 at 2693.540 kb on - strand, within Echvi_2274 at 2693.582 kb on - strand, within Echvi_2274 at 2693.612 kb on - strand, within Echvi_2274 at 2693.666 kb on - strand, within Echvi_2274 at 2693.684 kb on + strand, within Echvi_2274 at 2693.685 kb on - strand, within Echvi_2274 at 2693.686 kb on + strand, within Echvi_2274 at 2693.686 kb on + strand, within Echvi_2274 at 2693.687 kb on - strand, within Echvi_2274 at 2693.688 kb on + strand, within Echvi_2274 at 2693.689 kb on - strand, within Echvi_2274 at 2693.689 kb on - strand, within Echvi_2274 at 2693.733 kb on - strand, within Echvi_2274 at 2693.733 kb on - strand, within Echvi_2274 at 2693.767 kb on + strand at 2693.767 kb on + strand at 2693.782 kb on - strand at 2693.782 kb on - strand at 2693.825 kb on + strand at 2693.826 kb on - strand at 2693.826 kb on - strand at 2693.826 kb on - strand at 2693.899 kb on + strand at 2693.899 kb on + strand at 2693.968 kb on + strand at 2693.997 kb on + strand at 2693.998 kb on - strand at 2694.003 kb on - strand at 2694.003 kb on - strand at 2694.004 kb on + strand at 2694.004 kb on + strand at 2694.011 kb on + strand at 2694.011 kb on + strand at 2694.012 kb on - strand at 2694.067 kb on + strand at 2694.099 kb on - strand at 2694.102 kb on + strand at 2694.103 kb on - strand at 2694.169 kb on + strand at 2694.170 kb on - strand at 2694.175 kb on - strand at 2694.218 kb on - strand, within Echvi_2275 at 2694.264 kb on + strand, within Echvi_2275 at 2694.271 kb on - strand, within Echvi_2275 at 2694.271 kb on - strand, within Echvi_2275 at 2694.316 kb on - strand, within Echvi_2275 at 2694.316 kb on - strand, within Echvi_2275 at 2694.316 kb on - strand, within Echvi_2275 at 2694.399 kb on - strand, within Echvi_2275 at 2694.399 kb on - strand, within Echvi_2275 at 2694.458 kb on + strand, within Echvi_2275 at 2694.459 kb on - strand, within Echvi_2275 at 2694.536 kb on + strand, within Echvi_2275 at 2694.537 kb on - strand, within Echvi_2275 at 2694.554 kb on + strand, within Echvi_2275 at 2694.554 kb on + strand, within Echvi_2275 at 2694.596 kb on + strand, within Echvi_2275 at 2694.596 kb on + strand, within Echvi_2275 at 2694.730 kb on + strand, within Echvi_2275 at 2694.761 kb on + strand, within Echvi_2275 at 2694.811 kb on - strand, within Echvi_2275 at 2694.811 kb on - strand, within Echvi_2275 at 2694.962 kb on + strand, within Echvi_2275 at 2695.053 kb on + strand, within Echvi_2275 at 2695.053 kb on + strand, within Echvi_2275 at 2695.075 kb on + strand, within Echvi_2275 at 2695.168 kb on + strand, within Echvi_2275 at 2695.168 kb on + strand, within Echvi_2275 at 2695.169 kb on - strand, within Echvi_2275 at 2695.169 kb on - strand, within Echvi_2275 at 2695.238 kb on - strand, within Echvi_2275 at 2695.245 kb on + strand, within Echvi_2275 at 2695.292 kb on - strand, within Echvi_2275 at 2695.407 kb on + strand, within Echvi_2275 at 2695.408 kb on - strand, within Echvi_2275 at 2695.502 kb on + strand, within Echvi_2275 at 2695.502 kb on + strand, within Echvi_2275 at 2695.503 kb on - strand, within Echvi_2275 at 2695.535 kb on + strand, within Echvi_2275 at 2695.537 kb on + strand, within Echvi_2275 at 2695.537 kb on + strand, within Echvi_2275 at 2695.538 kb on - strand, within Echvi_2275 at 2695.538 kb on - strand, within Echvi_2275 at 2695.538 kb on - strand, within Echvi_2275 at 2695.538 kb on - strand, within Echvi_2275 at 2695.538 kb on - strand, within Echvi_2275 at 2695.538 kb on - strand, within Echvi_2275 at 2695.540 kb on + strand, within Echvi_2275 at 2695.540 kb on + strand, within Echvi_2275 at 2695.540 kb on + strand, within Echvi_2275 at 2695.541 kb on - strand, within Echvi_2275 at 2695.541 kb on - strand, within Echvi_2275 at 2695.545 kb on + strand, within Echvi_2275 at 2695.545 kb on + strand, within Echvi_2275 at 2695.546 kb on - strand, within Echvi_2275 at 2695.619 kb on + strand, within Echvi_2275 at 2695.621 kb on + strand, within Echvi_2275 at 2695.621 kb on + strand, within Echvi_2275 at 2695.657 kb on + strand, within Echvi_2275 at 2695.657 kb on + strand, within Echvi_2275 at 2695.658 kb on - strand, within Echvi_2275 at 2695.658 kb on - strand, within Echvi_2275 at 2695.658 kb on - strand, within Echvi_2275 at 2695.812 kb on - strand, within Echvi_2275 at 2695.912 kb on + strand, within Echvi_2275 at 2695.912 kb on + strand, within Echvi_2275 at 2695.913 kb on - strand, within Echvi_2275 at 2695.914 kb on + strand, within Echvi_2275 at 2695.914 kb on + strand, within Echvi_2275 at 2695.915 kb on - strand, within Echvi_2275 at 2695.915 kb on - strand, within Echvi_2275 at 2695.915 kb on - strand, within Echvi_2275 at 2695.967 kb on + strand, within Echvi_2275 at 2695.970 kb on + strand, within Echvi_2275 at 2695.970 kb on + strand, within Echvi_2275 at 2695.971 kb on - strand, within Echvi_2275 at 2695.971 kb on - strand, within Echvi_2275 at 2695.997 kb on - strand, within Echvi_2275 at 2695.997 kb on - strand, within Echvi_2275 at 2696.000 kb on - strand, within Echvi_2275 at 2696.051 kb on - strand, within Echvi_2275 at 2696.131 kb on + strand, within Echvi_2275 at 2696.152 kb on + strand, within Echvi_2275 at 2696.167 kb on - strand, within Echvi_2275 at 2696.227 kb on + strand, within Echvi_2275 at 2696.228 kb on - strand, within Echvi_2275 at 2696.256 kb on + strand, within Echvi_2275 at 2696.285 kb on - strand, within Echvi_2275 at 2696.366 kb on + strand, within Echvi_2275 at 2696.388 kb on + strand, within Echvi_2275 at 2696.388 kb on + strand, within Echvi_2275 at 2696.388 kb on + strand at 2696.388 kb on + strand, within Echvi_2275 at 2696.389 kb on - strand, within Echvi_2275 at 2696.449 kb on - strand, within Echvi_2275 at 2696.541 kb on + strand, within Echvi_2275 at 2696.570 kb on - strand, within Echvi_2275 at 2696.630 kb on + strand at 2696.692 kb on + strand at 2696.693 kb on - strand at 2696.705 kb on + strand at 2696.764 kb on - strand at 2696.786 kb on + strand at 2696.787 kb on - strand at 2696.880 kb on - strand at 2696.880 kb on - strand at 2696.911 kb on - strand at 2696.911 kb on - strand at 2696.911 kb on - strand at 2696.933 kb on - strand at 2697.043 kb on + strand, within Echvi_2276 at 2697.043 kb on + strand, within Echvi_2276 at 2697.043 kb on + strand, within Echvi_2276 at 2697.044 kb on - strand, within Echvi_2276 at 2697.047 kb on + strand, within Echvi_2276 at 2697.048 kb on - strand, within Echvi_2276 at 2697.048 kb on - strand, within Echvi_2276 at 2697.106 kb on - strand, within Echvi_2276 at 2697.133 kb on + strand, within Echvi_2276 at 2697.259 kb on + strand, within Echvi_2276 at 2697.260 kb on - strand, within Echvi_2276 at 2697.290 kb on + strand, within Echvi_2276 at 2697.291 kb on - strand, within Echvi_2276 at 2697.305 kb on + strand, within Echvi_2276 at 2697.306 kb on - strand, within Echvi_2276 at 2697.314 kb on + strand, within Echvi_2276 at 2697.359 kb on - strand, within Echvi_2276 at 2697.392 kb on + strand, within Echvi_2276 at 2697.418 kb on + strand, within Echvi_2276 at 2697.461 kb on + strand at 2697.461 kb on + strand at 2697.462 kb on - strand at 2697.465 kb on + strand at 2697.468 kb on - strand at 2697.468 kb on - strand at 2697.488 kb on + strand at 2697.496 kb on + strand at 2697.496 kb on + strand at 2697.506 kb on + strand at 2697.541 kb on - strand at 2697.541 kb on - strand at 2697.569 kb on + strand at 2697.686 kb on + strand, within Echvi_2277 at 2697.687 kb on - strand, within Echvi_2277 at 2697.687 kb on - strand, within Echvi_2277 at 2697.751 kb on + strand, within Echvi_2277 at 2697.754 kb on + strand, within Echvi_2277 at 2697.755 kb on - strand, within Echvi_2277 at 2697.799 kb on - strand, within Echvi_2277 at 2697.871 kb on - strand, within Echvi_2277
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 2,692,970 + Echvi_2274 0.21 -0.9 2,692,970 + Echvi_2274 0.21 -2.9 2,693,014 + Echvi_2274 0.24 +3.4 2,693,032 + Echvi_2274 0.26 -3.8 2,693,036 - Echvi_2274 0.26 -0.2 2,693,060 + Echvi_2274 0.28 +0.0 2,693,060 + Echvi_2274 0.28 +0.3 2,693,061 - Echvi_2274 0.29 -2.9 2,693,061 - Echvi_2274 0.29 +1.0 2,693,069 + Echvi_2274 0.29 +0.7 2,693,069 + Echvi_2274 0.29 -1.6 2,693,069 + Echvi_2274 0.29 -2.1 2,693,070 - Echvi_2274 0.29 +1.4 2,693,070 - Echvi_2274 0.29 +0.0 2,693,070 - Echvi_2274 0.29 -1.5 2,693,070 - Echvi_2274 0.29 -0.2 2,693,071 + Echvi_2274 0.29 -1.6 2,693,071 + Echvi_2274 0.29 +0.0 2,693,072 - Echvi_2274 0.30 -1.4 2,693,072 - Echvi_2274 0.30 -2.1 2,693,072 - Echvi_2274 0.30 +0.6 2,693,072 - Echvi_2274 0.30 +1.4 2,693,146 + Echvi_2274 0.36 +1.0 2,693,209 + Echvi_2274 0.42 +1.9 2,693,209 + Echvi_2274 0.42 -1.4 2,693,214 + Echvi_2274 0.42 -0.8 2,693,214 + Echvi_2274 0.42 -0.4 2,693,226 - Echvi_2274 0.43 +1.5 2,693,287 + Echvi_2274 0.48 -1.5 2,693,288 - Echvi_2274 0.49 -0.4 2,693,369 + Echvi_2274 0.56 +0.4 2,693,381 - Echvi_2274 0.57 -3.3 2,693,381 - Echvi_2274 0.57 +0.9 2,693,415 - Echvi_2274 0.60 +1.3 2,693,539 + Echvi_2274 0.71 +1.0 2,693,540 - Echvi_2274 0.71 -2.6 2,693,582 - Echvi_2274 0.74 +0.0 2,693,612 - Echvi_2274 0.77 -1.0 2,693,666 - Echvi_2274 0.82 +0.5 2,693,684 + Echvi_2274 0.83 +0.0 2,693,685 - Echvi_2274 0.83 +0.8 2,693,686 + Echvi_2274 0.84 -0.6 2,693,686 + Echvi_2274 0.84 -1.2 2,693,687 - Echvi_2274 0.84 +2.1 2,693,688 + Echvi_2274 0.84 +2.5 2,693,689 - Echvi_2274 0.84 -2.5 2,693,689 - Echvi_2274 0.84 -3.4 2,693,733 - Echvi_2274 0.88 +0.2 2,693,733 - Echvi_2274 0.88 -1.6 2,693,767 + +1.0 2,693,767 + +1.0 2,693,782 - +2.6 2,693,782 - +1.6 2,693,825 + -2.6 2,693,826 - +1.6 2,693,826 - -1.9 2,693,826 - -2.3 2,693,899 + +1.3 2,693,899 + +3.5 2,693,968 + -0.7 2,693,997 + +2.0 2,693,998 - +1.4 2,694,003 - -0.9 2,694,003 - +1.0 2,694,004 + +0.8 2,694,004 + +0.6 2,694,011 + +1.4 2,694,011 + +0.8 2,694,012 - +1.4 2,694,067 + +1.7 2,694,099 - +2.4 2,694,102 + -3.2 2,694,103 - -2.8 2,694,169 + +1.5 2,694,170 - -0.3 2,694,175 - +2.0 2,694,218 - Echvi_2275 0.11 -2.1 2,694,264 + Echvi_2275 0.12 -1.5 2,694,271 - Echvi_2275 0.12 +2.9 2,694,271 - Echvi_2275 0.12 +0.4 2,694,316 - Echvi_2275 0.14 -1.0 2,694,316 - Echvi_2275 0.14 -2.1 2,694,316 - Echvi_2275 0.14 -0.4 2,694,399 - Echvi_2275 0.17 +0.0 2,694,399 - Echvi_2275 0.17 -2.6 2,694,458 + Echvi_2275 0.19 +1.6 2,694,459 - Echvi_2275 0.19 -0.7 2,694,536 + Echvi_2275 0.21 +2.6 2,694,537 - Echvi_2275 0.21 -3.6 2,694,554 + Echvi_2275 0.22 +0.7 2,694,554 + Echvi_2275 0.22 +0.9 2,694,596 + Echvi_2275 0.23 -2.1 2,694,596 + Echvi_2275 0.23 +1.0 2,694,730 + Echvi_2275 0.28 +1.2 2,694,761 + Echvi_2275 0.29 +0.3 2,694,811 - Echvi_2275 0.30 +0.8 2,694,811 - Echvi_2275 0.30 -1.8 2,694,962 + Echvi_2275 0.35 +2.3 2,695,053 + Echvi_2275 0.38 +0.2 2,695,053 + Echvi_2275 0.38 -1.6 2,695,075 + Echvi_2275 0.39 +1.4 2,695,168 + Echvi_2275 0.42 -0.2 2,695,168 + Echvi_2275 0.42 +0.6 2,695,169 - Echvi_2275 0.42 -0.6 2,695,169 - Echvi_2275 0.42 +1.0 2,695,238 - Echvi_2275 0.45 -1.1 2,695,245 + Echvi_2275 0.45 -1.6 2,695,292 - Echvi_2275 0.46 +0.2 2,695,407 + Echvi_2275 0.50 +1.6 2,695,408 - Echvi_2275 0.50 -2.6 2,695,502 + Echvi_2275 0.53 -0.4 2,695,502 + Echvi_2275 0.53 -1.0 2,695,503 - Echvi_2275 0.53 +1.5 2,695,535 + Echvi_2275 0.54 -2.9 2,695,537 + Echvi_2275 0.54 -1.0 2,695,537 + Echvi_2275 0.54 +1.0 2,695,538 - Echvi_2275 0.55 +2.1 2,695,538 - Echvi_2275 0.55 -2.5 2,695,538 - Echvi_2275 0.55 -0.1 2,695,538 - Echvi_2275 0.55 -3.5 2,695,538 - Echvi_2275 0.55 -0.7 2,695,538 - Echvi_2275 0.55 +0.9 2,695,540 + Echvi_2275 0.55 -0.7 2,695,540 + Echvi_2275 0.55 -0.9 2,695,540 + Echvi_2275 0.55 -0.3 2,695,541 - Echvi_2275 0.55 +2.3 2,695,541 - Echvi_2275 0.55 +1.7 2,695,545 + Echvi_2275 0.55 -2.5 2,695,545 + Echvi_2275 0.55 +0.0 2,695,546 - Echvi_2275 0.55 -0.6 2,695,619 + Echvi_2275 0.57 -0.7 2,695,621 + Echvi_2275 0.57 +0.0 2,695,621 + Echvi_2275 0.57 -1.0 2,695,657 + Echvi_2275 0.58 -2.9 2,695,657 + Echvi_2275 0.58 +1.3 2,695,658 - Echvi_2275 0.58 +2.5 2,695,658 - Echvi_2275 0.58 -0.2 2,695,658 - Echvi_2275 0.58 -0.2 2,695,812 - Echvi_2275 0.64 -2.1 2,695,912 + Echvi_2275 0.67 -1.7 2,695,912 + Echvi_2275 0.67 -2.9 2,695,913 - Echvi_2275 0.67 -3.1 2,695,914 + Echvi_2275 0.67 -0.7 2,695,914 + Echvi_2275 0.67 -2.8 2,695,915 - Echvi_2275 0.67 -2.6 2,695,915 - Echvi_2275 0.67 -1.2 2,695,915 - Echvi_2275 0.67 +0.3 2,695,967 + Echvi_2275 0.69 -4.0 2,695,970 + Echvi_2275 0.69 +0.3 2,695,970 + Echvi_2275 0.69 +1.1 2,695,971 - Echvi_2275 0.69 +1.7 2,695,971 - Echvi_2275 0.69 -2.1 2,695,997 - Echvi_2275 0.70 +0.2 2,695,997 - Echvi_2275 0.70 -0.6 2,696,000 - Echvi_2275 0.70 +0.7 2,696,051 - Echvi_2275 0.72 +1.6 2,696,131 + Echvi_2275 0.74 -3.3 2,696,152 + Echvi_2275 0.75 -1.8 2,696,167 - Echvi_2275 0.75 -2.6 2,696,227 + Echvi_2275 0.77 -0.4 2,696,228 - Echvi_2275 0.77 -1.6 2,696,256 + Echvi_2275 0.78 -0.2 2,696,285 - Echvi_2275 0.79 -1.3 2,696,366 + Echvi_2275 0.82 +3.4 2,696,388 + Echvi_2275 0.83 -0.2 2,696,388 + Echvi_2275 0.83 +1.8 2,696,388 + +0.6 2,696,388 + Echvi_2275 0.83 -3.1 2,696,389 - Echvi_2275 0.83 +1.6 2,696,449 - Echvi_2275 0.85 -4.4 2,696,541 + Echvi_2275 0.88 -0.2 2,696,570 - Echvi_2275 0.89 -0.4 2,696,630 + -0.9 2,696,692 + +0.3 2,696,693 - -0.6 2,696,705 + +2.3 2,696,764 - -0.9 2,696,786 + -0.2 2,696,787 - +0.3 2,696,880 - -0.2 2,696,880 - -1.6 2,696,911 - -1.4 2,696,911 - -1.5 2,696,911 - +1.8 2,696,933 - +0.3 2,697,043 + Echvi_2276 0.10 -1.0 2,697,043 + Echvi_2276 0.10 +1.0 2,697,043 + Echvi_2276 0.10 +0.5 2,697,044 - Echvi_2276 0.10 +0.3 2,697,047 + Echvi_2276 0.11 +0.3 2,697,048 - Echvi_2276 0.11 +1.4 2,697,048 - Echvi_2276 0.11 -2.8 2,697,106 - Echvi_2276 0.22 +0.3 2,697,133 + Echvi_2276 0.28 +4.1 2,697,259 + Echvi_2276 0.52 -3.3 2,697,260 - Echvi_2276 0.52 -1.9 2,697,290 + Echvi_2276 0.58 -1.1 2,697,291 - Echvi_2276 0.58 +2.6 2,697,305 + Echvi_2276 0.61 -2.5 2,697,306 - Echvi_2276 0.61 -2.7 2,697,314 + Echvi_2276 0.63 +0.9 2,697,359 - Echvi_2276 0.72 -2.6 2,697,392 + Echvi_2276 0.78 -3.2 2,697,418 + Echvi_2276 0.83 +3.3 2,697,461 + +2.0 2,697,461 + -1.8 2,697,462 - +0.0 2,697,465 + +0.1 2,697,468 - +2.4 2,697,468 - +1.0 2,697,488 + -1.6 2,697,496 + -1.3 2,697,496 + +0.0 2,697,506 + -1.5 2,697,541 - -1.2 2,697,541 - +0.1 2,697,569 + +2.2 2,697,686 + Echvi_2277 0.10 +1.7 2,697,687 - Echvi_2277 0.10 +1.0 2,697,687 - Echvi_2277 0.10 +0.7 2,697,751 + Echvi_2277 0.15 -1.4 2,697,754 + Echvi_2277 0.15 -1.7 2,697,755 - Echvi_2277 0.15 -2.1 2,697,799 - Echvi_2277 0.18 -1.5 2,697,871 - Echvi_2277 0.22 +2.0
Or see this region's nucleotide sequence