Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2275

Experiment: L-Asparagine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_2274 and Echvi_2275 are separated by 25 nucleotidesEchvi_2275 and Echvi_2276 are separated by 83 nucleotidesEchvi_2276 and Echvi_2277 are separated by 21 nucleotides Echvi_2274: Echvi_2274 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 2,692,736 to 2,693,872 _2274 Echvi_2275: Echvi_2275 - translesion DNA polymerase (imuC-like) (from data), at 2,693,898 to 2,696,906 _2275 Echvi_2276: Echvi_2276 - Cysteine-rich domain., at 2,696,990 to 2,697,505 _2276 Echvi_2277: Echvi_2277 - Choline-glycine betaine transporter, at 2,697,527 to 2,699,065 _2277 Position (kb) 2693 2694 2695 2696 2697Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 2692.970 kb on + strand, within Echvi_2274at 2692.970 kb on + strand, within Echvi_2274at 2693.014 kb on + strand, within Echvi_2274at 2693.032 kb on + strand, within Echvi_2274at 2693.036 kb on - strand, within Echvi_2274at 2693.060 kb on + strand, within Echvi_2274at 2693.060 kb on + strand, within Echvi_2274at 2693.061 kb on - strand, within Echvi_2274at 2693.061 kb on - strand, within Echvi_2274at 2693.069 kb on + strand, within Echvi_2274at 2693.069 kb on + strand, within Echvi_2274at 2693.069 kb on + strand, within Echvi_2274at 2693.070 kb on - strand, within Echvi_2274at 2693.070 kb on - strand, within Echvi_2274at 2693.070 kb on - strand, within Echvi_2274at 2693.070 kb on - strand, within Echvi_2274at 2693.071 kb on + strand, within Echvi_2274at 2693.071 kb on + strand, within Echvi_2274at 2693.072 kb on - strand, within Echvi_2274at 2693.072 kb on - strand, within Echvi_2274at 2693.072 kb on - strand, within Echvi_2274at 2693.072 kb on - strand, within Echvi_2274at 2693.146 kb on + strand, within Echvi_2274at 2693.209 kb on + strand, within Echvi_2274at 2693.209 kb on + strand, within Echvi_2274at 2693.214 kb on + strand, within Echvi_2274at 2693.214 kb on + strand, within Echvi_2274at 2693.226 kb on - strand, within Echvi_2274at 2693.287 kb on + strand, within Echvi_2274at 2693.288 kb on - strand, within Echvi_2274at 2693.369 kb on + strand, within Echvi_2274at 2693.381 kb on - strand, within Echvi_2274at 2693.381 kb on - strand, within Echvi_2274at 2693.415 kb on - strand, within Echvi_2274at 2693.539 kb on + strand, within Echvi_2274at 2693.540 kb on - strand, within Echvi_2274at 2693.582 kb on - strand, within Echvi_2274at 2693.612 kb on - strand, within Echvi_2274at 2693.666 kb on - strand, within Echvi_2274at 2693.684 kb on + strand, within Echvi_2274at 2693.685 kb on - strand, within Echvi_2274at 2693.686 kb on + strand, within Echvi_2274at 2693.686 kb on + strand, within Echvi_2274at 2693.687 kb on - strand, within Echvi_2274at 2693.688 kb on + strand, within Echvi_2274at 2693.689 kb on - strand, within Echvi_2274at 2693.689 kb on - strand, within Echvi_2274at 2693.733 kb on - strand, within Echvi_2274at 2693.733 kb on - strand, within Echvi_2274at 2693.767 kb on + strandat 2693.767 kb on + strandat 2693.782 kb on - strandat 2693.782 kb on - strandat 2693.825 kb on + strandat 2693.826 kb on - strandat 2693.826 kb on - strandat 2693.826 kb on - strandat 2693.899 kb on + strandat 2693.899 kb on + strandat 2693.968 kb on + strandat 2693.997 kb on + strandat 2693.998 kb on - strandat 2694.003 kb on - strandat 2694.003 kb on - strandat 2694.004 kb on + strandat 2694.004 kb on + strandat 2694.011 kb on + strandat 2694.011 kb on + strandat 2694.012 kb on - strandat 2694.067 kb on + strandat 2694.099 kb on - strandat 2694.102 kb on + strandat 2694.103 kb on - strandat 2694.169 kb on + strandat 2694.170 kb on - strandat 2694.175 kb on - strandat 2694.218 kb on - strand, within Echvi_2275at 2694.264 kb on + strand, within Echvi_2275at 2694.271 kb on - strand, within Echvi_2275at 2694.271 kb on - strand, within Echvi_2275at 2694.316 kb on - strand, within Echvi_2275at 2694.316 kb on - strand, within Echvi_2275at 2694.316 kb on - strand, within Echvi_2275at 2694.399 kb on - strand, within Echvi_2275at 2694.399 kb on - strand, within Echvi_2275at 2694.458 kb on + strand, within Echvi_2275at 2694.459 kb on - strand, within Echvi_2275at 2694.536 kb on + strand, within Echvi_2275at 2694.537 kb on - strand, within Echvi_2275at 2694.554 kb on + strand, within Echvi_2275at 2694.554 kb on + strand, within Echvi_2275at 2694.596 kb on + strand, within Echvi_2275at 2694.596 kb on + strand, within Echvi_2275at 2694.730 kb on + strand, within Echvi_2275at 2694.761 kb on + strand, within Echvi_2275at 2694.811 kb on - strand, within Echvi_2275at 2694.811 kb on - strand, within Echvi_2275at 2694.962 kb on + strand, within Echvi_2275at 2695.053 kb on + strand, within Echvi_2275at 2695.053 kb on + strand, within Echvi_2275at 2695.075 kb on + strand, within Echvi_2275at 2695.168 kb on + strand, within Echvi_2275at 2695.168 kb on + strand, within Echvi_2275at 2695.169 kb on - strand, within Echvi_2275at 2695.169 kb on - strand, within Echvi_2275at 2695.238 kb on - strand, within Echvi_2275at 2695.245 kb on + strand, within Echvi_2275at 2695.292 kb on - strand, within Echvi_2275at 2695.407 kb on + strand, within Echvi_2275at 2695.408 kb on - strand, within Echvi_2275at 2695.502 kb on + strand, within Echvi_2275at 2695.502 kb on + strand, within Echvi_2275at 2695.503 kb on - strand, within Echvi_2275at 2695.535 kb on + strand, within Echvi_2275at 2695.537 kb on + strand, within Echvi_2275at 2695.537 kb on + strand, within Echvi_2275at 2695.538 kb on - strand, within Echvi_2275at 2695.538 kb on - strand, within Echvi_2275at 2695.538 kb on - strand, within Echvi_2275at 2695.538 kb on - strand, within Echvi_2275at 2695.538 kb on - strand, within Echvi_2275at 2695.538 kb on - strand, within Echvi_2275at 2695.540 kb on + strand, within Echvi_2275at 2695.540 kb on + strand, within Echvi_2275at 2695.540 kb on + strand, within Echvi_2275at 2695.541 kb on - strand, within Echvi_2275at 2695.541 kb on - strand, within Echvi_2275at 2695.545 kb on + strand, within Echvi_2275at 2695.545 kb on + strand, within Echvi_2275at 2695.546 kb on - strand, within Echvi_2275at 2695.619 kb on + strand, within Echvi_2275at 2695.621 kb on + strand, within Echvi_2275at 2695.621 kb on + strand, within Echvi_2275at 2695.657 kb on + strand, within Echvi_2275at 2695.657 kb on + strand, within Echvi_2275at 2695.658 kb on - strand, within Echvi_2275at 2695.658 kb on - strand, within Echvi_2275at 2695.658 kb on - strand, within Echvi_2275at 2695.812 kb on - strand, within Echvi_2275at 2695.912 kb on + strand, within Echvi_2275at 2695.912 kb on + strand, within Echvi_2275at 2695.913 kb on - strand, within Echvi_2275at 2695.914 kb on + strand, within Echvi_2275at 2695.914 kb on + strand, within Echvi_2275at 2695.915 kb on - strand, within Echvi_2275at 2695.915 kb on - strand, within Echvi_2275at 2695.915 kb on - strand, within Echvi_2275at 2695.967 kb on + strand, within Echvi_2275at 2695.970 kb on + strand, within Echvi_2275at 2695.970 kb on + strand, within Echvi_2275at 2695.971 kb on - strand, within Echvi_2275at 2695.971 kb on - strand, within Echvi_2275at 2695.997 kb on - strand, within Echvi_2275at 2695.997 kb on - strand, within Echvi_2275at 2696.000 kb on - strand, within Echvi_2275at 2696.051 kb on - strand, within Echvi_2275at 2696.131 kb on + strand, within Echvi_2275at 2696.152 kb on + strand, within Echvi_2275at 2696.167 kb on - strand, within Echvi_2275at 2696.227 kb on + strand, within Echvi_2275at 2696.228 kb on - strand, within Echvi_2275at 2696.256 kb on + strand, within Echvi_2275at 2696.285 kb on - strand, within Echvi_2275at 2696.366 kb on + strand, within Echvi_2275at 2696.388 kb on + strand, within Echvi_2275at 2696.388 kb on + strand, within Echvi_2275at 2696.388 kb on + strandat 2696.388 kb on + strand, within Echvi_2275at 2696.389 kb on - strand, within Echvi_2275at 2696.449 kb on - strand, within Echvi_2275at 2696.541 kb on + strand, within Echvi_2275at 2696.570 kb on - strand, within Echvi_2275at 2696.630 kb on + strandat 2696.692 kb on + strandat 2696.693 kb on - strandat 2696.705 kb on + strandat 2696.764 kb on - strandat 2696.786 kb on + strandat 2696.787 kb on - strandat 2696.880 kb on - strandat 2696.880 kb on - strandat 2696.911 kb on - strandat 2696.911 kb on - strandat 2696.911 kb on - strandat 2696.933 kb on - strandat 2697.043 kb on + strand, within Echvi_2276at 2697.043 kb on + strand, within Echvi_2276at 2697.043 kb on + strand, within Echvi_2276at 2697.044 kb on - strand, within Echvi_2276at 2697.047 kb on + strand, within Echvi_2276at 2697.048 kb on - strand, within Echvi_2276at 2697.048 kb on - strand, within Echvi_2276at 2697.106 kb on - strand, within Echvi_2276at 2697.133 kb on + strand, within Echvi_2276at 2697.259 kb on + strand, within Echvi_2276at 2697.260 kb on - strand, within Echvi_2276at 2697.290 kb on + strand, within Echvi_2276at 2697.291 kb on - strand, within Echvi_2276at 2697.305 kb on + strand, within Echvi_2276at 2697.306 kb on - strand, within Echvi_2276at 2697.314 kb on + strand, within Echvi_2276at 2697.359 kb on - strand, within Echvi_2276at 2697.392 kb on + strand, within Echvi_2276at 2697.418 kb on + strand, within Echvi_2276at 2697.461 kb on + strandat 2697.461 kb on + strandat 2697.462 kb on - strandat 2697.465 kb on + strandat 2697.468 kb on - strandat 2697.468 kb on - strandat 2697.488 kb on + strandat 2697.496 kb on + strandat 2697.496 kb on + strandat 2697.506 kb on + strandat 2697.541 kb on - strandat 2697.541 kb on - strandat 2697.569 kb on + strandat 2697.686 kb on + strand, within Echvi_2277at 2697.687 kb on - strand, within Echvi_2277at 2697.687 kb on - strand, within Echvi_2277at 2697.751 kb on + strand, within Echvi_2277at 2697.754 kb on + strand, within Echvi_2277at 2697.755 kb on - strand, within Echvi_2277at 2697.799 kb on - strand, within Echvi_2277at 2697.871 kb on - strand, within Echvi_2277

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Asparagine (N)
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2,692,970 + Echvi_2274 0.21 -0.9
2,692,970 + Echvi_2274 0.21 -2.9
2,693,014 + Echvi_2274 0.24 +3.4
2,693,032 + Echvi_2274 0.26 -3.8
2,693,036 - Echvi_2274 0.26 -0.2
2,693,060 + Echvi_2274 0.28 +0.0
2,693,060 + Echvi_2274 0.28 +0.3
2,693,061 - Echvi_2274 0.29 -2.9
2,693,061 - Echvi_2274 0.29 +1.0
2,693,069 + Echvi_2274 0.29 +0.7
2,693,069 + Echvi_2274 0.29 -1.6
2,693,069 + Echvi_2274 0.29 -2.1
2,693,070 - Echvi_2274 0.29 +1.4
2,693,070 - Echvi_2274 0.29 +0.0
2,693,070 - Echvi_2274 0.29 -1.5
2,693,070 - Echvi_2274 0.29 -0.2
2,693,071 + Echvi_2274 0.29 -1.6
2,693,071 + Echvi_2274 0.29 +0.0
2,693,072 - Echvi_2274 0.30 -1.4
2,693,072 - Echvi_2274 0.30 -2.1
2,693,072 - Echvi_2274 0.30 +0.6
2,693,072 - Echvi_2274 0.30 +1.4
2,693,146 + Echvi_2274 0.36 +1.0
2,693,209 + Echvi_2274 0.42 +1.9
2,693,209 + Echvi_2274 0.42 -1.4
2,693,214 + Echvi_2274 0.42 -0.8
2,693,214 + Echvi_2274 0.42 -0.4
2,693,226 - Echvi_2274 0.43 +1.5
2,693,287 + Echvi_2274 0.48 -1.5
2,693,288 - Echvi_2274 0.49 -0.4
2,693,369 + Echvi_2274 0.56 +0.4
2,693,381 - Echvi_2274 0.57 -3.3
2,693,381 - Echvi_2274 0.57 +0.9
2,693,415 - Echvi_2274 0.60 +1.3
2,693,539 + Echvi_2274 0.71 +1.0
2,693,540 - Echvi_2274 0.71 -2.6
2,693,582 - Echvi_2274 0.74 +0.0
2,693,612 - Echvi_2274 0.77 -1.0
2,693,666 - Echvi_2274 0.82 +0.5
2,693,684 + Echvi_2274 0.83 +0.0
2,693,685 - Echvi_2274 0.83 +0.8
2,693,686 + Echvi_2274 0.84 -0.6
2,693,686 + Echvi_2274 0.84 -1.2
2,693,687 - Echvi_2274 0.84 +2.1
2,693,688 + Echvi_2274 0.84 +2.5
2,693,689 - Echvi_2274 0.84 -2.5
2,693,689 - Echvi_2274 0.84 -3.4
2,693,733 - Echvi_2274 0.88 +0.2
2,693,733 - Echvi_2274 0.88 -1.6
2,693,767 + +1.0
2,693,767 + +1.0
2,693,782 - +2.6
2,693,782 - +1.6
2,693,825 + -2.6
2,693,826 - +1.6
2,693,826 - -1.9
2,693,826 - -2.3
2,693,899 + +1.3
2,693,899 + +3.5
2,693,968 + -0.7
2,693,997 + +2.0
2,693,998 - +1.4
2,694,003 - -0.9
2,694,003 - +1.0
2,694,004 + +0.8
2,694,004 + +0.6
2,694,011 + +1.4
2,694,011 + +0.8
2,694,012 - +1.4
2,694,067 + +1.7
2,694,099 - +2.4
2,694,102 + -3.2
2,694,103 - -2.8
2,694,169 + +1.5
2,694,170 - -0.3
2,694,175 - +2.0
2,694,218 - Echvi_2275 0.11 -2.1
2,694,264 + Echvi_2275 0.12 -1.5
2,694,271 - Echvi_2275 0.12 +2.9
2,694,271 - Echvi_2275 0.12 +0.4
2,694,316 - Echvi_2275 0.14 -1.0
2,694,316 - Echvi_2275 0.14 -2.1
2,694,316 - Echvi_2275 0.14 -0.4
2,694,399 - Echvi_2275 0.17 +0.0
2,694,399 - Echvi_2275 0.17 -2.6
2,694,458 + Echvi_2275 0.19 +1.6
2,694,459 - Echvi_2275 0.19 -0.7
2,694,536 + Echvi_2275 0.21 +2.6
2,694,537 - Echvi_2275 0.21 -3.6
2,694,554 + Echvi_2275 0.22 +0.7
2,694,554 + Echvi_2275 0.22 +0.9
2,694,596 + Echvi_2275 0.23 -2.1
2,694,596 + Echvi_2275 0.23 +1.0
2,694,730 + Echvi_2275 0.28 +1.2
2,694,761 + Echvi_2275 0.29 +0.3
2,694,811 - Echvi_2275 0.30 +0.8
2,694,811 - Echvi_2275 0.30 -1.8
2,694,962 + Echvi_2275 0.35 +2.3
2,695,053 + Echvi_2275 0.38 +0.2
2,695,053 + Echvi_2275 0.38 -1.6
2,695,075 + Echvi_2275 0.39 +1.4
2,695,168 + Echvi_2275 0.42 -0.2
2,695,168 + Echvi_2275 0.42 +0.6
2,695,169 - Echvi_2275 0.42 -0.6
2,695,169 - Echvi_2275 0.42 +1.0
2,695,238 - Echvi_2275 0.45 -1.1
2,695,245 + Echvi_2275 0.45 -1.6
2,695,292 - Echvi_2275 0.46 +0.2
2,695,407 + Echvi_2275 0.50 +1.6
2,695,408 - Echvi_2275 0.50 -2.6
2,695,502 + Echvi_2275 0.53 -0.4
2,695,502 + Echvi_2275 0.53 -1.0
2,695,503 - Echvi_2275 0.53 +1.5
2,695,535 + Echvi_2275 0.54 -2.9
2,695,537 + Echvi_2275 0.54 -1.0
2,695,537 + Echvi_2275 0.54 +1.0
2,695,538 - Echvi_2275 0.55 +2.1
2,695,538 - Echvi_2275 0.55 -2.5
2,695,538 - Echvi_2275 0.55 -0.1
2,695,538 - Echvi_2275 0.55 -3.5
2,695,538 - Echvi_2275 0.55 -0.7
2,695,538 - Echvi_2275 0.55 +0.9
2,695,540 + Echvi_2275 0.55 -0.7
2,695,540 + Echvi_2275 0.55 -0.9
2,695,540 + Echvi_2275 0.55 -0.3
2,695,541 - Echvi_2275 0.55 +2.3
2,695,541 - Echvi_2275 0.55 +1.7
2,695,545 + Echvi_2275 0.55 -2.5
2,695,545 + Echvi_2275 0.55 +0.0
2,695,546 - Echvi_2275 0.55 -0.6
2,695,619 + Echvi_2275 0.57 -0.7
2,695,621 + Echvi_2275 0.57 +0.0
2,695,621 + Echvi_2275 0.57 -1.0
2,695,657 + Echvi_2275 0.58 -2.9
2,695,657 + Echvi_2275 0.58 +1.3
2,695,658 - Echvi_2275 0.58 +2.5
2,695,658 - Echvi_2275 0.58 -0.2
2,695,658 - Echvi_2275 0.58 -0.2
2,695,812 - Echvi_2275 0.64 -2.1
2,695,912 + Echvi_2275 0.67 -1.7
2,695,912 + Echvi_2275 0.67 -2.9
2,695,913 - Echvi_2275 0.67 -3.1
2,695,914 + Echvi_2275 0.67 -0.7
2,695,914 + Echvi_2275 0.67 -2.8
2,695,915 - Echvi_2275 0.67 -2.6
2,695,915 - Echvi_2275 0.67 -1.2
2,695,915 - Echvi_2275 0.67 +0.3
2,695,967 + Echvi_2275 0.69 -4.0
2,695,970 + Echvi_2275 0.69 +0.3
2,695,970 + Echvi_2275 0.69 +1.1
2,695,971 - Echvi_2275 0.69 +1.7
2,695,971 - Echvi_2275 0.69 -2.1
2,695,997 - Echvi_2275 0.70 +0.2
2,695,997 - Echvi_2275 0.70 -0.6
2,696,000 - Echvi_2275 0.70 +0.7
2,696,051 - Echvi_2275 0.72 +1.6
2,696,131 + Echvi_2275 0.74 -3.3
2,696,152 + Echvi_2275 0.75 -1.8
2,696,167 - Echvi_2275 0.75 -2.6
2,696,227 + Echvi_2275 0.77 -0.4
2,696,228 - Echvi_2275 0.77 -1.6
2,696,256 + Echvi_2275 0.78 -0.2
2,696,285 - Echvi_2275 0.79 -1.3
2,696,366 + Echvi_2275 0.82 +3.4
2,696,388 + Echvi_2275 0.83 -0.2
2,696,388 + Echvi_2275 0.83 +1.8
2,696,388 + +0.6
2,696,388 + Echvi_2275 0.83 -3.1
2,696,389 - Echvi_2275 0.83 +1.6
2,696,449 - Echvi_2275 0.85 -4.4
2,696,541 + Echvi_2275 0.88 -0.2
2,696,570 - Echvi_2275 0.89 -0.4
2,696,630 + -0.9
2,696,692 + +0.3
2,696,693 - -0.6
2,696,705 + +2.3
2,696,764 - -0.9
2,696,786 + -0.2
2,696,787 - +0.3
2,696,880 - -0.2
2,696,880 - -1.6
2,696,911 - -1.4
2,696,911 - -1.5
2,696,911 - +1.8
2,696,933 - +0.3
2,697,043 + Echvi_2276 0.10 -1.0
2,697,043 + Echvi_2276 0.10 +1.0
2,697,043 + Echvi_2276 0.10 +0.5
2,697,044 - Echvi_2276 0.10 +0.3
2,697,047 + Echvi_2276 0.11 +0.3
2,697,048 - Echvi_2276 0.11 +1.4
2,697,048 - Echvi_2276 0.11 -2.8
2,697,106 - Echvi_2276 0.22 +0.3
2,697,133 + Echvi_2276 0.28 +4.1
2,697,259 + Echvi_2276 0.52 -3.3
2,697,260 - Echvi_2276 0.52 -1.9
2,697,290 + Echvi_2276 0.58 -1.1
2,697,291 - Echvi_2276 0.58 +2.6
2,697,305 + Echvi_2276 0.61 -2.5
2,697,306 - Echvi_2276 0.61 -2.7
2,697,314 + Echvi_2276 0.63 +0.9
2,697,359 - Echvi_2276 0.72 -2.6
2,697,392 + Echvi_2276 0.78 -3.2
2,697,418 + Echvi_2276 0.83 +3.3
2,697,461 + +2.0
2,697,461 + -1.8
2,697,462 - +0.0
2,697,465 + +0.1
2,697,468 - +2.4
2,697,468 - +1.0
2,697,488 + -1.6
2,697,496 + -1.3
2,697,496 + +0.0
2,697,506 + -1.5
2,697,541 - -1.2
2,697,541 - +0.1
2,697,569 + +2.2
2,697,686 + Echvi_2277 0.10 +1.7
2,697,687 - Echvi_2277 0.10 +1.0
2,697,687 - Echvi_2277 0.10 +0.7
2,697,751 + Echvi_2277 0.15 -1.4
2,697,754 + Echvi_2277 0.15 -1.7
2,697,755 - Echvi_2277 0.15 -2.1
2,697,799 - Echvi_2277 0.18 -1.5
2,697,871 - Echvi_2277 0.22 +2.0

Or see this region's nucleotide sequence