Experiment: m.b. Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20040 and CA264_20045 are separated by 7 nucleotides CA264_20045 and CA264_20050 overlap by 17 nucleotides CA264_20050 and CA264_20055 are separated by 11 nucleotides
CA264_20040: CA264_20040 - hypothetical protein, at 4,619,680 to 4,620,483
_20040
CA264_20045: CA264_20045 - UDP-2,3-diacylglucosamine hydrolase, at 4,620,491 to 4,621,261
_20045
CA264_20050: CA264_20050 - hypothetical protein, at 4,621,245 to 4,621,898
_20050
CA264_20055: CA264_20055 - peptidase M41, at 4,621,910 to 4,624,033
_20055
Position (kb)
4621
4622 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4620.262 kb on + strand, within CA264_20040 at 4620.263 kb on - strand, within CA264_20040 at 4620.288 kb on - strand, within CA264_20040 at 4620.350 kb on + strand, within CA264_20040 at 4620.350 kb on + strand, within CA264_20040 at 4620.351 kb on - strand, within CA264_20040 at 4620.352 kb on + strand, within CA264_20040 at 4620.352 kb on + strand, within CA264_20040 at 4620.352 kb on + strand, within CA264_20040 at 4620.352 kb on + strand, within CA264_20040 at 4620.352 kb on + strand, within CA264_20040 at 4620.353 kb on - strand, within CA264_20040 at 4620.353 kb on - strand, within CA264_20040 at 4620.353 kb on - strand, within CA264_20040 at 4620.353 kb on - strand, within CA264_20040 at 4620.353 kb on - strand, within CA264_20040 at 4620.353 kb on - strand, within CA264_20040 at 4620.393 kb on + strand, within CA264_20040 at 4620.402 kb on + strand, within CA264_20040 at 4620.402 kb on + strand, within CA264_20040 at 4620.402 kb on + strand, within CA264_20040 at 4620.403 kb on - strand at 4620.473 kb on - strand at 4620.473 kb on - strand at 4620.482 kb on - strand at 4620.482 kb on - strand at 4620.483 kb on + strand at 4620.484 kb on - strand at 4621.305 kb on + strand at 4621.381 kb on + strand, within CA264_20050 at 4621.381 kb on + strand, within CA264_20050 at 4621.382 kb on - strand, within CA264_20050 at 4621.382 kb on - strand, within CA264_20050 at 4621.600 kb on - strand, within CA264_20050 at 4621.681 kb on + strand, within CA264_20050 at 4621.682 kb on - strand, within CA264_20050 at 4621.717 kb on + strand, within CA264_20050 at 4621.717 kb on + strand, within CA264_20050 at 4621.718 kb on - strand, within CA264_20050 at 4621.722 kb on - strand, within CA264_20050 at 4621.786 kb on - strand, within CA264_20050 at 4621.867 kb on - strand at 4621.869 kb on + strand at 4621.869 kb on + strand at 4621.873 kb on - strand at 4621.895 kb on - strand at 4621.928 kb on + strand at 4621.928 kb on + strand at 4621.929 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.001 mg/ml remove 4,620,262 + CA264_20040 0.72 -0.6 4,620,263 - CA264_20040 0.73 +1.0 4,620,288 - CA264_20040 0.76 -0.7 4,620,350 + CA264_20040 0.83 -2.1 4,620,350 + CA264_20040 0.83 -1.8 4,620,351 - CA264_20040 0.83 -0.0 4,620,352 + CA264_20040 0.84 +0.6 4,620,352 + CA264_20040 0.84 -0.8 4,620,352 + CA264_20040 0.84 -0.7 4,620,352 + CA264_20040 0.84 -0.2 4,620,352 + CA264_20040 0.84 +0.2 4,620,353 - CA264_20040 0.84 +1.4 4,620,353 - CA264_20040 0.84 -1.8 4,620,353 - CA264_20040 0.84 -0.8 4,620,353 - CA264_20040 0.84 +0.1 4,620,353 - CA264_20040 0.84 -0.2 4,620,353 - CA264_20040 0.84 -0.0 4,620,393 + CA264_20040 0.89 -1.7 4,620,402 + CA264_20040 0.90 -1.7 4,620,402 + CA264_20040 0.90 -0.9 4,620,402 + CA264_20040 0.90 -1.3 4,620,403 - -1.4 4,620,473 - -0.6 4,620,473 - +1.0 4,620,482 - +0.2 4,620,482 - -0.4 4,620,483 + -0.0 4,620,484 - +0.0 4,621,305 + -4.0 4,621,381 + CA264_20050 0.21 -2.5 4,621,381 + CA264_20050 0.21 -2.8 4,621,382 - CA264_20050 0.21 +0.2 4,621,382 - CA264_20050 0.21 -0.8 4,621,600 - CA264_20050 0.54 -2.0 4,621,681 + CA264_20050 0.67 -3.1 4,621,682 - CA264_20050 0.67 -0.6 4,621,717 + CA264_20050 0.72 -2.7 4,621,717 + CA264_20050 0.72 -1.7 4,621,718 - CA264_20050 0.72 -3.8 4,621,722 - CA264_20050 0.73 -2.5 4,621,786 - CA264_20050 0.83 -2.8 4,621,867 - -2.2 4,621,869 + -3.8 4,621,869 + -3.1 4,621,873 - -2.7 4,621,895 - -3.5 4,621,928 + -1.5 4,621,928 + -1.3 4,621,929 - -2.2
Or see this region's nucleotide sequence