Experiment: m.b. Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19870 and CA264_19875 are separated by 176 nucleotides CA264_19875 and CA264_19880 are separated by 88 nucleotides CA264_19880 and CA264_19885 overlap by 4 nucleotides
CA264_19870: CA264_19870 - protein translocase subunit SecDF, at 4,582,926 to 4,585,922
_19870
CA264_19875: CA264_19875 - RNA methyltransferase, at 4,586,099 to 4,586,428
_19875
CA264_19880: CA264_19880 - potassium transporter KtrA, at 4,586,517 to 4,587,209
_19880
CA264_19885: CA264_19885 - uridine kinase, at 4,587,206 to 4,587,826
_19885
Position (kb)
4586
4587 Strain fitness (log2 ratio)
-1
0
1
2 at 4585.926 kb on + strand at 4585.926 kb on + strand at 4585.933 kb on - strand at 4585.937 kb on + strand at 4585.938 kb on - strand at 4585.941 kb on + strand at 4585.942 kb on - strand at 4585.943 kb on + strand at 4585.944 kb on - strand at 4585.944 kb on - strand at 4585.945 kb on + strand at 4585.945 kb on + strand at 4585.945 kb on + strand at 4585.946 kb on - strand at 4585.946 kb on - strand at 4585.946 kb on - strand at 4585.946 kb on - strand at 4585.949 kb on - strand at 4585.965 kb on + strand at 4585.965 kb on + strand at 4585.966 kb on - strand at 4585.966 kb on - strand at 4585.987 kb on + strand at 4585.987 kb on + strand at 4585.987 kb on + strand at 4585.988 kb on - strand at 4586.002 kb on + strand at 4586.002 kb on + strand at 4586.005 kb on - strand at 4586.085 kb on - strand at 4586.093 kb on + strand at 4586.131 kb on + strand at 4586.172 kb on + strand, within CA264_19875 at 4586.172 kb on + strand, within CA264_19875 at 4586.283 kb on - strand, within CA264_19875 at 4586.294 kb on + strand, within CA264_19875 at 4586.475 kb on + strand at 4586.475 kb on + strand at 4586.476 kb on - strand at 4586.476 kb on - strand at 4586.488 kb on - strand at 4586.518 kb on + strand at 4587.215 kb on + strand at 4587.228 kb on - strand at 4587.228 kb on - strand at 4587.232 kb on - strand at 4587.232 kb on - strand at 4587.303 kb on + strand, within CA264_19885 at 4587.303 kb on + strand, within CA264_19885 at 4587.311 kb on - strand, within CA264_19885 at 4587.387 kb on - strand, within CA264_19885
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.001 mg/ml remove 4,585,926 + +1.2 4,585,926 + +0.9 4,585,933 - +0.5 4,585,937 + +0.7 4,585,938 - +0.4 4,585,941 + +0.1 4,585,942 - +0.3 4,585,943 + +0.4 4,585,944 - +0.9 4,585,944 - +1.3 4,585,945 + +1.2 4,585,945 + +1.0 4,585,945 + -1.3 4,585,946 - +0.9 4,585,946 - +0.3 4,585,946 - -0.3 4,585,946 - +0.3 4,585,949 - +1.0 4,585,965 + +0.9 4,585,965 + +1.8 4,585,966 - +0.5 4,585,966 - +0.9 4,585,987 + +0.8 4,585,987 + +0.6 4,585,987 + +0.4 4,585,988 - +0.1 4,586,002 + +0.4 4,586,002 + +0.8 4,586,005 - -0.0 4,586,085 - -1.3 4,586,093 + +0.8 4,586,131 + +0.9 4,586,172 + CA264_19875 0.22 +1.0 4,586,172 + CA264_19875 0.22 +0.8 4,586,283 - CA264_19875 0.56 +0.7 4,586,294 + CA264_19875 0.59 +0.7 4,586,475 + +0.2 4,586,475 + +1.0 4,586,476 - -0.4 4,586,476 - +0.4 4,586,488 - +0.4 4,586,518 + +0.8 4,587,215 + +0.9 4,587,228 - +0.8 4,587,228 - +1.2 4,587,232 - -0.0 4,587,232 - +0.2 4,587,303 + CA264_19885 0.16 +0.5 4,587,303 + CA264_19885 0.16 +0.6 4,587,311 - CA264_19885 0.17 +0.5 4,587,387 - CA264_19885 0.29 -0.6
Or see this region's nucleotide sequence