Experiment: m.b. Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12715 and CA264_12720 are separated by 295 nucleotides CA264_12720 and CA264_12725 are separated by 156 nucleotides CA264_12725 and CA264_12730 are separated by 82 nucleotides
CA264_12715: CA264_12715 - peptidase M61, at 2,963,463 to 2,965,295
_12715
CA264_12720: CA264_12720 - hypothetical protein, at 2,965,591 to 2,966,046
_12720
CA264_12725: CA264_12725 - hypothetical protein, at 2,966,203 to 2,967,216
_12725
CA264_12730: CA264_12730 - sodium:solute symporter, at 2,967,299 to 2,968,777
_12730
Position (kb)
2966
2967
2968 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2965.210 kb on + strand at 2965.240 kb on + strand at 2965.407 kb on + strand at 2965.415 kb on + strand at 2965.415 kb on + strand at 2965.418 kb on + strand at 2965.580 kb on - strand at 2965.630 kb on + strand at 2965.631 kb on - strand at 2965.635 kb on - strand at 2965.635 kb on - strand at 2965.635 kb on - strand at 2965.694 kb on - strand, within CA264_12720 at 2965.711 kb on + strand, within CA264_12720 at 2965.711 kb on + strand, within CA264_12720 at 2965.711 kb on + strand, within CA264_12720 at 2965.753 kb on + strand, within CA264_12720 at 2965.753 kb on + strand, within CA264_12720 at 2965.754 kb on - strand, within CA264_12720 at 2965.778 kb on - strand, within CA264_12720 at 2965.888 kb on + strand, within CA264_12720 at 2965.948 kb on - strand, within CA264_12720 at 2966.048 kb on + strand at 2966.069 kb on - strand at 2966.175 kb on - strand at 2966.176 kb on + strand at 2966.178 kb on + strand at 2966.214 kb on + strand at 2966.256 kb on + strand at 2966.270 kb on - strand at 2966.398 kb on + strand, within CA264_12725 at 2966.398 kb on + strand, within CA264_12725 at 2966.398 kb on + strand, within CA264_12725 at 2966.499 kb on + strand, within CA264_12725 at 2966.597 kb on + strand, within CA264_12725 at 2966.597 kb on + strand, within CA264_12725 at 2966.598 kb on - strand, within CA264_12725 at 2966.598 kb on - strand, within CA264_12725 at 2966.673 kb on - strand, within CA264_12725 at 2966.705 kb on + strand, within CA264_12725 at 2966.705 kb on + strand, within CA264_12725 at 2966.705 kb on + strand, within CA264_12725 at 2966.706 kb on - strand, within CA264_12725 at 2966.762 kb on - strand, within CA264_12725 at 2966.890 kb on + strand, within CA264_12725 at 2966.923 kb on + strand, within CA264_12725 at 2966.933 kb on + strand, within CA264_12725 at 2966.984 kb on - strand, within CA264_12725 at 2966.984 kb on - strand, within CA264_12725 at 2967.185 kb on + strand at 2967.200 kb on + strand at 2967.224 kb on - strand at 2967.245 kb on + strand at 2967.267 kb on - strand at 2967.287 kb on - strand at 2967.293 kb on + strand at 2967.294 kb on - strand at 2967.298 kb on + strand at 2967.308 kb on - strand at 2967.314 kb on - strand at 2967.314 kb on - strand at 2967.355 kb on + strand at 2967.356 kb on - strand at 2967.357 kb on + strand at 2967.363 kb on - strand at 2967.582 kb on - strand, within CA264_12730 at 2967.582 kb on - strand, within CA264_12730 at 2967.584 kb on + strand, within CA264_12730 at 2967.608 kb on + strand, within CA264_12730 at 2967.608 kb on + strand, within CA264_12730 at 2967.608 kb on + strand, within CA264_12730 at 2967.609 kb on - strand, within CA264_12730 at 2967.611 kb on - strand, within CA264_12730 at 2967.614 kb on + strand, within CA264_12730 at 2967.614 kb on + strand, within CA264_12730 at 2967.614 kb on + strand, within CA264_12730 at 2967.615 kb on - strand, within CA264_12730 at 2967.694 kb on + strand, within CA264_12730 at 2967.695 kb on - strand, within CA264_12730 at 2967.779 kb on - strand, within CA264_12730 at 2967.860 kb on - strand, within CA264_12730 at 2967.908 kb on - strand, within CA264_12730 at 2967.930 kb on + strand, within CA264_12730 at 2967.930 kb on + strand, within CA264_12730 at 2967.931 kb on - strand, within CA264_12730 at 2967.931 kb on - strand, within CA264_12730 at 2967.980 kb on - strand, within CA264_12730 at 2967.992 kb on + strand, within CA264_12730 at 2968.128 kb on + strand, within CA264_12730 at 2968.129 kb on - strand, within CA264_12730 at 2968.129 kb on - strand, within CA264_12730 at 2968.176 kb on - strand, within CA264_12730 at 2968.176 kb on - strand, within CA264_12730
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.001 mg/ml remove 2,965,210 + -0.0 2,965,240 + -0.4 2,965,407 + -0.5 2,965,415 + -1.7 2,965,415 + +0.2 2,965,418 + +0.3 2,965,580 - -0.3 2,965,630 + -1.7 2,965,631 - -1.2 2,965,635 - -0.3 2,965,635 - -0.4 2,965,635 - +0.5 2,965,694 - CA264_12720 0.23 -1.0 2,965,711 + CA264_12720 0.26 -0.6 2,965,711 + CA264_12720 0.26 -0.5 2,965,711 + CA264_12720 0.26 +0.7 2,965,753 + CA264_12720 0.36 -2.9 2,965,753 + CA264_12720 0.36 -0.8 2,965,754 - CA264_12720 0.36 +0.1 2,965,778 - CA264_12720 0.41 -0.2 2,965,888 + CA264_12720 0.65 -0.2 2,965,948 - CA264_12720 0.78 +0.8 2,966,048 + +0.0 2,966,069 - -1.5 2,966,175 - -0.4 2,966,176 + +0.1 2,966,178 + -0.0 2,966,214 + +1.2 2,966,256 + -0.5 2,966,270 - +0.7 2,966,398 + CA264_12725 0.19 +0.2 2,966,398 + CA264_12725 0.19 +1.9 2,966,398 + CA264_12725 0.19 +0.2 2,966,499 + CA264_12725 0.29 +0.4 2,966,597 + CA264_12725 0.39 +0.2 2,966,597 + CA264_12725 0.39 +0.5 2,966,598 - CA264_12725 0.39 -0.1 2,966,598 - CA264_12725 0.39 +0.4 2,966,673 - CA264_12725 0.46 +0.2 2,966,705 + CA264_12725 0.50 +1.0 2,966,705 + CA264_12725 0.50 -0.1 2,966,705 + CA264_12725 0.50 +1.3 2,966,706 - CA264_12725 0.50 +0.6 2,966,762 - CA264_12725 0.55 +0.2 2,966,890 + CA264_12725 0.68 -1.2 2,966,923 + CA264_12725 0.71 -0.2 2,966,933 + CA264_12725 0.72 -0.4 2,966,984 - CA264_12725 0.77 +0.0 2,966,984 - CA264_12725 0.77 -0.3 2,967,185 + -0.2 2,967,200 + -0.2 2,967,224 - -0.5 2,967,245 + +0.1 2,967,267 - -0.3 2,967,287 - +0.1 2,967,293 + -0.7 2,967,294 - +0.3 2,967,298 + -0.4 2,967,308 - -0.5 2,967,314 - -0.6 2,967,314 - -0.4 2,967,355 + -1.1 2,967,356 - -0.6 2,967,357 + +0.4 2,967,363 - -0.1 2,967,582 - CA264_12730 0.19 +0.4 2,967,582 - CA264_12730 0.19 -0.8 2,967,584 + CA264_12730 0.19 -0.9 2,967,608 + CA264_12730 0.21 +0.5 2,967,608 + CA264_12730 0.21 -1.5 2,967,608 + CA264_12730 0.21 +0.7 2,967,609 - CA264_12730 0.21 +1.4 2,967,611 - CA264_12730 0.21 -0.2 2,967,614 + CA264_12730 0.21 +0.1 2,967,614 + CA264_12730 0.21 +0.1 2,967,614 + CA264_12730 0.21 -0.3 2,967,615 - CA264_12730 0.21 +2.2 2,967,694 + CA264_12730 0.27 +0.6 2,967,695 - CA264_12730 0.27 -0.2 2,967,779 - CA264_12730 0.32 +0.1 2,967,860 - CA264_12730 0.38 -0.2 2,967,908 - CA264_12730 0.41 -0.5 2,967,930 + CA264_12730 0.43 -2.1 2,967,930 + CA264_12730 0.43 +0.2 2,967,931 - CA264_12730 0.43 -1.1 2,967,931 - CA264_12730 0.43 +0.2 2,967,980 - CA264_12730 0.46 -0.3 2,967,992 + CA264_12730 0.47 +0.1 2,968,128 + CA264_12730 0.56 +0.5 2,968,129 - CA264_12730 0.56 -2.6 2,968,129 - CA264_12730 0.56 -0.2 2,968,176 - CA264_12730 0.59 -0.8 2,968,176 - CA264_12730 0.59 -0.2
Or see this region's nucleotide sequence