Experiment: m.b. Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11530 and CA264_11535 are separated by 228 nucleotides CA264_11535 and CA264_11540 overlap by 1 nucleotides CA264_11540 and CA264_11545 overlap by 4 nucleotides CA264_11545 and CA264_11550 are separated by 156 nucleotides
CA264_11530: CA264_11530 - recombinase XerD, at 2,682,007 to 2,683,305
_11530
CA264_11535: CA264_11535 - transcriptional regulator, at 2,683,534 to 2,683,743
_11535
CA264_11540: CA264_11540 - phosphatidylinositol kinase, at 2,683,743 to 2,684,075
_11540
CA264_11545: CA264_11545 - toxin HipA, at 2,684,072 to 2,685,013
_11545
CA264_11550: CA264_11550 - IS3 family transposase, at 2,685,170 to 2,686,296
_11550
Position (kb)
2684
2685
2686 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2683.081 kb on + strand, within CA264_11530 at 2683.082 kb on - strand, within CA264_11530 at 2683.106 kb on + strand, within CA264_11530 at 2683.106 kb on + strand, within CA264_11530 at 2683.120 kb on - strand, within CA264_11530 at 2683.129 kb on - strand, within CA264_11530 at 2683.132 kb on + strand, within CA264_11530 at 2683.132 kb on + strand, within CA264_11530 at 2683.132 kb on + strand, within CA264_11530 at 2683.132 kb on + strand, within CA264_11530 at 2683.133 kb on - strand, within CA264_11530 at 2683.134 kb on + strand, within CA264_11530 at 2683.134 kb on + strand, within CA264_11530 at 2683.135 kb on - strand, within CA264_11530 at 2683.135 kb on - strand, within CA264_11530 at 2683.135 kb on - strand, within CA264_11530 at 2683.311 kb on + strand at 2683.335 kb on - strand at 2683.335 kb on - strand at 2683.335 kb on - strand at 2683.339 kb on + strand at 2683.340 kb on - strand at 2683.340 kb on - strand at 2683.340 kb on - strand at 2683.378 kb on - strand at 2683.385 kb on + strand at 2683.386 kb on - strand at 2683.417 kb on + strand at 2683.421 kb on + strand at 2683.422 kb on - strand at 2683.533 kb on + strand at 2683.728 kb on + strand at 2683.728 kb on + strand at 2683.733 kb on + strand at 2683.733 kb on + strand at 2683.737 kb on + strand at 2683.738 kb on - strand at 2683.738 kb on - strand at 2683.760 kb on - strand at 2684.038 kb on + strand, within CA264_11540 at 2684.044 kb on + strand at 2684.044 kb on + strand at 2684.045 kb on - strand at 2684.087 kb on + strand at 2684.087 kb on + strand at 2684.088 kb on - strand at 2684.088 kb on - strand at 2684.170 kb on + strand, within CA264_11545 at 2684.170 kb on + strand, within CA264_11545 at 2684.171 kb on - strand, within CA264_11545 at 2684.180 kb on + strand, within CA264_11545 at 2684.182 kb on + strand, within CA264_11545 at 2684.182 kb on + strand, within CA264_11545 at 2684.182 kb on + strand, within CA264_11545 at 2684.183 kb on - strand, within CA264_11545 at 2684.333 kb on + strand, within CA264_11545 at 2684.333 kb on + strand, within CA264_11545 at 2684.388 kb on + strand, within CA264_11545 at 2684.389 kb on - strand, within CA264_11545 at 2684.485 kb on - strand, within CA264_11545 at 2684.546 kb on - strand, within CA264_11545 at 2684.558 kb on + strand, within CA264_11545 at 2684.558 kb on + strand, within CA264_11545 at 2684.561 kb on + strand, within CA264_11545 at 2684.561 kb on + strand, within CA264_11545 at 2684.562 kb on - strand, within CA264_11545 at 2684.570 kb on + strand, within CA264_11545 at 2684.580 kb on + strand, within CA264_11545 at 2684.580 kb on + strand, within CA264_11545 at 2684.581 kb on - strand, within CA264_11545 at 2684.596 kb on + strand, within CA264_11545 at 2684.596 kb on + strand, within CA264_11545 at 2684.597 kb on - strand, within CA264_11545 at 2684.597 kb on - strand, within CA264_11545 at 2684.597 kb on - strand, within CA264_11545 at 2684.600 kb on + strand, within CA264_11545 at 2684.629 kb on + strand, within CA264_11545 at 2684.630 kb on - strand, within CA264_11545 at 2684.630 kb on - strand, within CA264_11545 at 2684.797 kb on + strand, within CA264_11545 at 2684.894 kb on - strand, within CA264_11545 at 2684.962 kb on + strand at 2684.973 kb on - strand at 2684.973 kb on - strand at 2685.055 kb on + strand at 2685.172 kb on - strand at 2685.204 kb on - strand at 2685.219 kb on - strand at 2685.271 kb on + strand at 2685.271 kb on + strand at 2685.273 kb on + strand at 2685.273 kb on + strand at 2685.273 kb on + strand at 2685.377 kb on - strand, within CA264_11550 at 2685.435 kb on + strand, within CA264_11550 at 2685.488 kb on + strand, within CA264_11550 at 2685.489 kb on - strand, within CA264_11550 at 2685.491 kb on - strand, within CA264_11550 at 2685.539 kb on + strand, within CA264_11550 at 2685.597 kb on + strand, within CA264_11550 at 2685.598 kb on - strand, within CA264_11550 at 2685.602 kb on - strand, within CA264_11550 at 2685.602 kb on - strand, within CA264_11550 at 2685.608 kb on + strand, within CA264_11550 at 2685.609 kb on - strand, within CA264_11550 at 2685.615 kb on - strand, within CA264_11550 at 2685.682 kb on + strand, within CA264_11550 at 2685.683 kb on - strand, within CA264_11550 at 2685.683 kb on - strand, within CA264_11550 at 2685.685 kb on + strand, within CA264_11550 at 2685.685 kb on + strand, within CA264_11550 at 2685.750 kb on - strand, within CA264_11550 at 2685.782 kb on + strand, within CA264_11550 at 2685.790 kb on + strand, within CA264_11550 at 2685.791 kb on - strand, within CA264_11550 at 2685.827 kb on - strand, within CA264_11550 at 2685.832 kb on + strand, within CA264_11550 at 2685.857 kb on + strand, within CA264_11550 at 2685.922 kb on - strand, within CA264_11550 at 2685.948 kb on - strand, within CA264_11550 at 2685.952 kb on + strand, within CA264_11550
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.001 mg/ml remove 2,683,081 + CA264_11530 0.83 -1.9 2,683,082 - CA264_11530 0.83 -2.1 2,683,106 + CA264_11530 0.85 -0.1 2,683,106 + CA264_11530 0.85 -1.1 2,683,120 - CA264_11530 0.86 -0.3 2,683,129 - CA264_11530 0.86 -0.4 2,683,132 + CA264_11530 0.87 -0.2 2,683,132 + CA264_11530 0.87 +0.2 2,683,132 + CA264_11530 0.87 -0.3 2,683,132 + CA264_11530 0.87 -0.2 2,683,133 - CA264_11530 0.87 +0.5 2,683,134 + CA264_11530 0.87 -0.3 2,683,134 + CA264_11530 0.87 +0.0 2,683,135 - CA264_11530 0.87 +0.3 2,683,135 - CA264_11530 0.87 +2.4 2,683,135 - CA264_11530 0.87 -0.6 2,683,311 + +0.5 2,683,335 - -0.7 2,683,335 - -0.4 2,683,335 - -0.3 2,683,339 + +0.2 2,683,340 - -0.2 2,683,340 - -0.1 2,683,340 - +0.5 2,683,378 - +0.3 2,683,385 + -0.4 2,683,386 - +0.1 2,683,417 + -0.3 2,683,421 + -0.9 2,683,422 - +0.0 2,683,533 + -0.3 2,683,728 + +0.1 2,683,728 + -0.3 2,683,733 + +1.7 2,683,733 + +0.6 2,683,737 + -0.2 2,683,738 - -1.8 2,683,738 - +0.8 2,683,760 - +0.5 2,684,038 + CA264_11540 0.89 +0.7 2,684,044 + -0.1 2,684,044 + -0.2 2,684,045 - -0.9 2,684,087 + +0.1 2,684,087 + -0.1 2,684,088 - -0.6 2,684,088 - +0.8 2,684,170 + CA264_11545 0.10 +1.6 2,684,170 + CA264_11545 0.10 -0.7 2,684,171 - CA264_11545 0.11 +0.0 2,684,180 + CA264_11545 0.11 -0.5 2,684,182 + CA264_11545 0.12 +1.1 2,684,182 + CA264_11545 0.12 -0.2 2,684,182 + CA264_11545 0.12 -0.0 2,684,183 - CA264_11545 0.12 +1.4 2,684,333 + CA264_11545 0.28 +1.6 2,684,333 + CA264_11545 0.28 +0.4 2,684,388 + CA264_11545 0.34 -0.6 2,684,389 - CA264_11545 0.34 -0.3 2,684,485 - CA264_11545 0.44 +0.3 2,684,546 - CA264_11545 0.50 +0.7 2,684,558 + CA264_11545 0.52 -1.9 2,684,558 + CA264_11545 0.52 +0.1 2,684,561 + CA264_11545 0.52 +0.7 2,684,561 + CA264_11545 0.52 +0.3 2,684,562 - CA264_11545 0.52 +0.5 2,684,570 + CA264_11545 0.53 -2.0 2,684,580 + CA264_11545 0.54 -0.8 2,684,580 + CA264_11545 0.54 -0.5 2,684,581 - CA264_11545 0.54 -0.2 2,684,596 + CA264_11545 0.56 +2.1 2,684,596 + CA264_11545 0.56 +0.2 2,684,597 - CA264_11545 0.56 -0.9 2,684,597 - CA264_11545 0.56 -0.5 2,684,597 - CA264_11545 0.56 +0.7 2,684,600 + CA264_11545 0.56 -0.8 2,684,629 + CA264_11545 0.59 +1.0 2,684,630 - CA264_11545 0.59 -0.1 2,684,630 - CA264_11545 0.59 -0.4 2,684,797 + CA264_11545 0.77 +0.2 2,684,894 - CA264_11545 0.87 +0.2 2,684,962 + +1.3 2,684,973 - -1.4 2,684,973 - -0.1 2,685,055 + -0.4 2,685,172 - -0.8 2,685,204 - +0.0 2,685,219 - -0.0 2,685,271 + +0.4 2,685,271 + -0.1 2,685,273 + -1.7 2,685,273 + +0.3 2,685,273 + -0.1 2,685,377 - CA264_11550 0.18 -0.6 2,685,435 + CA264_11550 0.24 +0.7 2,685,488 + CA264_11550 0.28 +0.9 2,685,489 - CA264_11550 0.28 +0.7 2,685,491 - CA264_11550 0.28 -0.7 2,685,539 + CA264_11550 0.33 +1.1 2,685,597 + CA264_11550 0.38 -0.0 2,685,598 - CA264_11550 0.38 +0.4 2,685,602 - CA264_11550 0.38 +0.3 2,685,602 - CA264_11550 0.38 +0.4 2,685,608 + CA264_11550 0.39 +0.6 2,685,609 - CA264_11550 0.39 +0.0 2,685,615 - CA264_11550 0.39 -0.2 2,685,682 + CA264_11550 0.45 -1.1 2,685,683 - CA264_11550 0.46 +0.1 2,685,683 - CA264_11550 0.46 +0.4 2,685,685 + CA264_11550 0.46 +1.0 2,685,685 + CA264_11550 0.46 -1.6 2,685,750 - CA264_11550 0.51 -0.7 2,685,782 + CA264_11550 0.54 -0.3 2,685,790 + CA264_11550 0.55 +1.1 2,685,791 - CA264_11550 0.55 -0.1 2,685,827 - CA264_11550 0.58 +0.2 2,685,832 + CA264_11550 0.59 +0.8 2,685,857 + CA264_11550 0.61 +0.1 2,685,922 - CA264_11550 0.67 -0.5 2,685,948 - CA264_11550 0.69 -0.4 2,685,952 + CA264_11550 0.69 +0.2
Or see this region's nucleotide sequence